PRGDB00062446 (receptor-like kinase)

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receptor-like kinase
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 21886733 (AF509746)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Hordeum vulgare subsp. spontaneum

Comment?

Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds.

DNA Sequence

ATGCAGCCTACTATGCTCAACGAACAAGCCATAGTCAACAACCTTACCGAAGATAACGTGACAAGGATGTGGGCTAGCAGAACCACATGGGAGGACGAACAGCTCTACATAGTCCTCGATCAGGGCACTACTGACATCGGTCATCCTGCTAGTCTGGTCGTCAAGAAGTTCCAGAATGAGAACCCAGCACTGCAGGTGGACGCCAATGTCAAGTACCGCTACAAGTCGGAGATGATCCTGTTAGTCAGCAATTCTCACGATAACATCATCAAAGTCATAGACCTCATCGAGAGGGAAGATGCGATCATGCTCGTTTACGGCTATCCGGTGAACGGCAGCCTTCGATCCTGGCTGCACCAACCAATGGATGACCGTCAGCCGCTGAGCTGGCCGCAGAGGAGGCTCATTGCCATTGGCACGGCCAAAGGGCTCCACCACCTGCACTATGGATGCAATAAGCCGATTATCCACCACAACATCAGCTCTGACAACATCTTGCTTGATCAGAATTGCAATGCCGTGATAACCAATTTTGATGATGCATGTATGCACATGGCAGGGCTCGGGCAACCGTTGCCAATCATGGGCGTGCGTCCTGGGAACTTTGGGTTCGCGGCTCCAGAATATGGGAACACGGCAAGCCATATGACGGAGAAGGTAGACACTTACAGCTTTGGTGTGATTTTGCTGGAGCTCGTCACTGGGCGGATGGCCAATGGAGGTGGAGGGGATGGCAACCTGGCGATTTGGGCGCACAAAGTGATTGAGCTAATGGCAAAACAACCGGAGAAGTTCGAGAGTGTTGTGGACAAGCGCATCCCAGATCAAGCGCGGTACATAGACGACATGGCAAGTGTATTCAGGCTCGGCGTCGATTGCACAGTTGTGGATCCGCAGCAAAGGCCGTCCATGCATATGGTTCTCAAACGACTCCACCGTCTCCTTGGGTGTCGCCCATTTCGTGGCCTCCTCACCCGGCTGTGA


Protein sequences

Name Description Sequence
receptor-like kinase receptor-like kinase [Hordeum vulgare subsp. spontaneum].

MQPTMLNEQAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLLGCRPFRGLLTRL

receptor-like kinase receptor-like kinase [Hordeum vulgare subsp. spontaneum].

MQPTMLNEQAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLLGCRPFRGLLTRL

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
3-311 Kinase_like
Protein kinase-like domain

PTMLNEQAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL

superfamily: SSF56112
IPR011009
3-311 Kinase_like
Protein kinase-like domain

PTMLNEQAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL

ProfileScan: PS50011
IPR000719
9-315 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

QAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLL

ProfileScan: PS50011
IPR000719
9-315 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

QAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLL

HMMPfam: PF00069
IPR017442
48-310 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

HPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKR

HMMPfam: PF00069
IPR017442
48-310 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

HPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKR

Gene3D: G3DSA:3.30.200.20
53-115 G3DSA:3.30.200.20

VVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLR

Gene3D: G3DSA:3.30.200.20
53-115 G3DSA:3.30.200.20

VVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLR

HMMPanther: PTHR24420
74-313 PTHR24420,FAMILY NOT NAMED

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

HMMPanther: PTHR24420:SF789
74-313 PTHR24420:SF789

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

HMMPanther: PTHR24420
74-313 PTHR24420,FAMILY NOT NAMED

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

HMMPanther: PTHR24420:SF789
74-313 PTHR24420:SF789

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

Gene3D: G3DSA:1.10.510.10
116-311 G3DSA:1.10.510.10

SWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL

Gene3D: G3DSA:1.10.510.10
116-311 G3DSA:1.10.510.10

SWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL


List of References

R Brueggeman, N Rostoks, D Kudrna, A Kilian, F Han, J Chen, A Druka, B Steffenson, A Kleinhofs
The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases.
Proc. Natl. Acad. Sci. U.S.A.: 2002, 99(14);9328-33
PubMed:12077318 WorldCat.org DOI (P p)

R Brueggeman, N Rostoks, D Kudrna, A Kilian, F Han, J Chen, A Druka, B Steffenson, A Kleinhofs
The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases.
Proc. Natl. Acad. Sci. U.S.A.: 2002, 99(14);9328-33
PubMed:12077318 WorldCat.org DOI (P p)





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Analyses

Blast

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