PRGDB00062447 (receptor-like kinase)

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receptor-like kinase
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 21886731 (AF509745)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Hordeum vulgare subsp. vulgare

Comment?

Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene, complete cds.

DNA Sequence

ATGCAGCCTATTATGCTCAACGAACAAGCCATAGTCAACAACCTTACCGAAGATAACGTGACAAGGATGTGGGCTAGCAGAACCACATGGGAGGACGAACAGCTCTACATAGTCCTCGATCAGGGCACTACTGACATCGGTCATCCTGCTAGTCTGGTCGTCAAGAAGTTCCAGAATGAGAACCCAGCACTGCAGGTGGACGCCAATGTCAAGTACCGCTACAAGTCGGAGATGATCCTGTTAGTCAGCAATTCTCACGATAACATCATCAAAGTCATAGACCTCATCGAGAGGGAAGATGCGATCATGCTCGTTTACGGCTATCCGGTGAACGGCAGCCTTCGATCCTGGCTGCACCAACCAATGGATGACCGTCAGCCGCTGAGCTGGCCGCAGAGGAGGCTCATTGCCATTGGCACGGCCAAAGGGCTCCACCACCTGCACTATGGATGCAATAAGCCGATTATCCACCACAACATCAGCTCTGACAACATCTTGCTTGATCAGAATTGCAATGCCGTGATAACCAATTTTGATGATGCATGTATGCACATGGCAGGGCTCGGGCAACCGTTGCCAATCATGGGCGTGCGTCCTGGGAACTTTGGGTTCGCGGCTCCAGAATATGGGAACACGGCAAGCCATATGACGGAGAAGGTAGACACTTACAGCTTTGGTGTGATTTTGCTGGAGCTCGTCACTGGGCGGATGGCCAATGGAGGTGGAGGGGATGGCAACCTGGCGATTTGGGCGCACAAAGTGATTGAGCTAATGGCAAAACAACCGGAGAAGTTCGAGAGTGTTGTGGACAAGCGCATCCCAGATCAAGCGCGGTACATAGACGACATGGCAAGTGTATTCAGGCTCGGCGTCGATTGCACAGTTGTGGATCCGCAGCAAAGGCCGTCCATGCATATGGTTCTCAAACGACTCCACCGTCTCCTTGGGTGTCGCCCATTTCGTGGCCTCCTCACCCGGCTGTGA


Protein sequences

Name Description Sequence
receptor-like kinase receptor-like kinase [Hordeum vulgare subsp. vulgare].

MQPIMLNEQAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLLGCRPFRGLLTRL

receptor-like kinase receptor-like kinase [Hordeum vulgare subsp. vulgare].

MQPIMLNEQAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLLGCRPFRGLLTRL

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
9-315 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

QAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLL

ProfileScan: PS50011
IPR000719
9-315 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

QAIVNNLTEDNVTRMWASRTTWEDEQLYIVLDQGTTDIGHPASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHRLL

HMMPfam: PF00069
IPR017442
49-310 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

PASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKR

HMMPfam: PF00069
IPR017442
49-310 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

PASLVVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKR

Gene3D: G3DSA:3.30.200.20
53-115 G3DSA:3.30.200.20

VVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLR

superfamily: SSF56112
IPR011009
53-311 Kinase_like
Protein kinase-like domain

VVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL

Gene3D: G3DSA:3.30.200.20
53-115 G3DSA:3.30.200.20

VVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLR

superfamily: SSF56112
IPR011009
53-311 Kinase_like
Protein kinase-like domain

VVKKFQNENPALQVDANVKYRYKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL

HMMPanther: PTHR24420
74-313 PTHR24420,FAMILY NOT NAMED

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

HMMPanther: PTHR24420:SF789
74-313 PTHR24420:SF789

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

HMMPanther: PTHR24420
74-313 PTHR24420,FAMILY NOT NAMED

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

HMMPanther: PTHR24420:SF789
74-313 PTHR24420:SF789

YKSEMILLVSNSHDNIIKVIDLIEREDAIMLVYGYPVNGSLRSWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRLHR

Gene3D: G3DSA:1.10.510.10
116-311 G3DSA:1.10.510.10

SWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL

Gene3D: G3DSA:1.10.510.10
116-311 G3DSA:1.10.510.10

SWLHQPMDDRQPLSWPQRRLIAIGTAKGLHHLHYGCNKPIIHHNISSDNILLDQNCNAVITNFDDACMHMAGLGQPLPIMGVRPGNFGFAAPEYGNTASHMTEKVDTYSFGVILLELVTGRMANGGGGDGNLAIWAHKVIELMAKQPEKFESVVDKRIPDQARYIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL


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Analyses

Blast

Blast matches against Reference R-Genes. Show


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