PRGDB00062459 (hypothetical protein)

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hypothetical protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 300145810 (GL377638)
Gene Class Unknown
Domain Type LRR
Gene Species Selaginella moellendorffii

Comment?

Selaginella moellendorffii unplaced genomic scaffold SELMOscaffold_73, whole genome shotgun sequence.

DNA Sequence

TGAAAAAGAAAACGCAGTTTGTCACTGCGGCTTGTACGAAGATCTGCTTATTGGAGAGGATCAAGTAGGATGAATGGCATTCTGTGACATGCTGATGCTGCTGCTGCTGCTCCTGCCAGTCAGACAAGCTTTGACTATCAATCACAGTGACCACCAAATGCAGGCTTTGCTCAACTTCAAGTCCGGGATCACTGCTGATGCTTCAGGAGTCCTGGCGAACTGGACGCGCAAGAAGAAAGCTTCTTTGTGTTCTTCGAGCTGGAGCGGAATAATCTGTGACTCTGACAATCTCAGTGTTGTGGGTATCAATCTCTCCAACTGCATGCTTCAAGGTACGATCCTCCCTTCTTCTCTTGGAAGCATTGGTAGCTTGAAAGTTCTGAATCTGAGTCGAAACAACCTGTCGGGGAAGATACCACTTGACTTCGGCCAGTTGAAAAATCTGAGGACTCTGGCGCTGAACTTCAATGAGCTCGAGGGCCAAATTCCAGAAGAGCTTGGAACCATCCAAGAGTTGACATATCTCAACCTCGGGTACAACAAACTTCGCGGTGGAATACCTGCTATGCTCGGACACCTCAAGAAGCTCGAAACTCTGGCACTCCACATGAACAATCTCACCAACATCATTCCCAGGGAACTCAGCAACTGTAGCAATCTTCAGGTGCTTGTTCTCCAGGCCAACATGCTGGAGGGTTCAATTCCACCAGAGTTAGGAGTGTTGCCCCAGCTGGAGCTGATTGCCTTGGGTAGCAATCACTTGTCAGGAAGTTTACCAGCTTCTCTTGGGAATTGTACCAACATGCAGGAGATCTGGCTGGGAGTCAACAGCTTGAAGGGTCCAATTCCAGAAGAGCTTGGACGATTGAAGAATCTTCAGGTGCTGCATCTGGAGCAAAACCAGCTGGACGGACATATTCCACTGGCCATCGCTAATTGCTCAATGCTCATCGAGCTGTTTCTGGGAGGAAATTCCCTGAGTGGACAGATTCCAAGTTCCTTCGGTCAGCTTCAGAACATGCAAGCCCTCTCCCTGTATGGATCCCAAAGGCTCACCGGCAAGATCCCAGAAGAGCTAGGCAATTGCAGCCAGCTAGAATGGTTGGATATCGGCTGGTCCCCCAATCTGGATGGTCCTATCCCATCATCATTGTTTCGGCTTCCGCTAACCACATTGGCTTTGGCTGAACTCGGACTGACGAAGAACAACACCGGCACTTTATCACCAAGGATTGGCAACGTAACAACGCTGACCAATCTAGACCTGGGAATTTGTACTTTCCGAGGAAGCATTCCCAAGGAGCTGGCAAATCTGACAGCGCTTGAGCGTTTGAATCTAGGATCCAATCTGTTTGACGGAGAAATTCCACAAGATCTGGGACGACTCATTAATCTGCAGCACTTATTCCTTGATACGAACAACTTGCATGGAGCCGTACCACAGTCGATCACAAGCTTGAGCAAGCTCCAGGATTTGTTCATTCACAGGAACTCTCTGTCCGGAAGGATTTCCCACCTGTCATTCGAAAACTGGACACAGATGACAGATCTGAGGATGCACGAAAACAAATTCACAGGCTCAATACCTGAGTCACTTGGCGACCTTTCCCAGCTCCAAATTCTCTATATGTTTAGTAATAGCTTCAGCGGGACAGTCCCCTCCATCGTCGGGAAGCTTCAGAAGTTGACTCAAATGGATCTATCCAAGAATCTGCTCATTGGAGAAATTCCTCGAAGCCTTGGGAACTGCAGTTCATTGAAGCAGTTGGACCTGTCAAAGAATGCCATTAGTGGAAGAGTCCCGGATGAAATTGGTACAATATGCAAAAGCCTTCAAGCACTGGGAGTAGAAGGAAACAAACTGACTGGGAACCTTCCGGTTACCTTGGAGAACTGCACCTTGTTGGAGCGCCTTAAGGTTGGGAATAACTCACTGAAGGGAGAGCTTGGTATGAACATTTCGAAGTTGTCCTCTTTGAAGATCCTCTCGCTCTCACTCAACAATTTCCAAGGCCAGTTTCCACTGTTAAACGCAACTTCCATCGAGCTGATTGATCTGCGGGGGAACAGGTTTACTGGTGAGCTCCCTTCATCTCTGGGAAAGTACCAAACGCTGAGAGTGCTAAGCTTGGGGAACAACAGCTTCCGTGGTTCCTTGACATCCATGGATTGGCTGTGGAATCTCACCCAACTTCAGGTGCTCGACTTATCAAATAACCAGTTTGAAGGATCACTGCCCGCCACCCTCAACAATCTACAGGGTTTCAAGTTAACATCGGAGGGCGATGCTGCGGGTGCCGATCGACTATATCAAGACCTGTTCCTCAGTGTGAAAGGCAATTTATTTGCTCCATACCAGTACGTCTTACGCACCACGACTCTGCTGGATTTATCGACGAATCAGCTGACTGGCAAGCTTCCTGTAAGCATGGGCGACCTCGTTGGCCTTCGTTACCTTAACCTGTCCCACAACAATTTTAGTGGTGAGATTCCAAGTTCCTATGGGAAAATCACTCAACTGGAGCAGCTCGACCTGTCCTTCAACCACCTGCAAGGCTCCATTCCAACCTTACTCGCAAATCTCGACTCGCTTGCCTCCTTCAACGTGTCTTTCAATCAGCTGGAGGGTGAGATCCCGCAGAAGAAGCACTTTGACACATTCGACAACTCAAGCTTCATCGGAAATCTCGGCCTCTGTGGTCGCCCACTCTCCAAACAATGCCACGAAACAGAATCAGGAGCAGCCGGACATGTGGGAGCTGGAAGCATCTCTGAGTCGGACTCCAACGAGACCTGGTGGGAAGAAAATGTGTCACCTGTTTCTTTCGCACTGTCCTCCTCCATTAGCTTCTGCTTGTTGTGGTTGATGCTACGCTGGAGGCAGCT


Protein sequences

Name Description Sequence
hypothetical protein hypothetical protein SELMODRAFT_425288 [Selaginella moellendorffii].

MAFCDMLMLLLLLLPVRQALTINHSDHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLSKQCHETESGAAGHVGAGSISESDSNETWWEENVSPVSFALSSSISFCLLWLMLRWRQLEKENAVCHCGLYEDLLIGEDQVG

hypothetical protein hypothetical protein SELMODRAFT_425288 [Selaginella moellendorffii].

MAFCDMLMLLLLLLPVRQALTINHSDHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLSKQCHETESGAAGHVGAGSISESDSNETWWEENVSPVSFALSSSISFCLLWLMLRWRQLEKENAVCHCGLYEDLLIGEDQVG


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
1-942 PTHR24420,FAMILY NOT NAMED

MAFCDMLMLLLLLLPVRQALTINHSDHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLSKQCHETESGAAGHVGAGSISESDSNETWWEENVSPVSFALSSSISFCLLWLMLRWRQLEKEN

HMMPanther: PTHR24420:SF474
1-942 PTHR24420:SF474,SUBFAMILY NOT NAMED

MAFCDMLMLLLLLLPVRQALTINHSDHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLSKQCHETESGAAGHVGAGSISESDSNETWWEENVSPVSFALSSSISFCLLWLMLRWRQLEKEN

HMMPanther: PTHR24420
1-942 PTHR24420,FAMILY NOT NAMED

MAFCDMLMLLLLLLPVRQALTINHSDHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLSKQCHETESGAAGHVGAGSISESDSNETWWEENVSPVSFALSSSISFCLLWLMLRWRQLEKEN

HMMPanther: PTHR24420:SF474
1-942 PTHR24420:SF474,SUBFAMILY NOT NAMED

MAFCDMLMLLLLLLPVRQALTINHSDHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLSKQCHETESGAAGHVGAGSISESDSNETWWEENVSPVSFALSSSISFCLLWLMLRWRQLEKEN

HMMPfam: PF08263
IPR013210
26-69 LRRNT_2
Leucine-rich repeat-containing N-terminal, type 2

DHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICD

HMMPfam: PF08263
IPR013210
26-69 LRRNT_2
Leucine-rich repeat-containing N-terminal, type 2

DHQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICD

Gene3D: G3DSA:3.80.10.10
27-238 G3DSA:3.80.10.10

HQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASL

Gene3D: G3DSA:3.80.10.10
27-238 G3DSA:3.80.10.10

HQMQALLNFKSGITADASGVLANWTRKKKASLCSSSWSGIICDSDNLSVVGINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASL

superfamily: SSF52047
77-381 SSF52047,LRR

GINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTG

superfamily: SSF52047
77-381 SSF52047,LRR

GINLSNCMLQGTILPSSLGSIGSLKVLNLSRNNLSGKIPLDFGQLKNLRTLALNFNELEGQIPEELGTIQELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANMLEGSIPPELGVLPQLELIALGSNHLSGSLPASLGNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRLPLTTLALAELGLTKNNTG

ProfileScan: PS51450
IPR001611
99-120 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKVLNLSRNNLSGKIPLDFGQ

HMMPfam: PF00560
IPR001611
99-121 LRR_1
Leucine-rich repeat

SLKVLNLSRNNLSGKIPLDFGQL

ProfileScan: PS51450
IPR001611
99-120 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKVLNLSRNNLSGKIPLDFGQ

HMMPfam: PF00560
IPR001611
99-121 LRR_1
Leucine-rich repeat

SLKVLNLSRNNLSGKIPLDFGQL

ProfileScan: PS51450
IPR001611
123-145 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLRTLALNFNELEGQIPEELGTI

ProfileScan: PS51450
IPR001611
123-145 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLRTLALNFNELEGQIPEELGTI

ProfileScan: PS51450
IPR001611
147-170 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

ELTYLNLGYNKLRGGIPAMLGHLK

ProfileScan: PS51450
IPR001611
147-170 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

ELTYLNLGYNKLRGGIPAMLGHLK

HMMPfam: PF13855
147-206 LRR_8,Leucine rich repeat

ELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANML

HMMPfam: PF13855
147-206 LRR_8,Leucine rich repeat

ELTYLNLGYNKLRGGIPAMLGHLKKLETLALHMNNLTNIIPRELSNCSNLQVLVLQANML

ProfileScan: PS51450
IPR001611
171-192 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLETLALHMNNLTNIIPRELSN

ProfileScan: PS51450
IPR001611
171-192 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLETLALHMNNLTNIIPRELSN

ProfileScan: PS51450
IPR001611
195-217 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQVLVLQANMLEGSIPPELGVL

ProfileScan: PS51450
IPR001611
195-217 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQVLVLQANMLEGSIPPELGVL

Gene3D: G3DSA:3.80.10.10
239-363 G3DSA:3.80.10.10

GNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRL

Gene3D: G3DSA:3.80.10.10
239-363 G3DSA:3.80.10.10

GNCTNMQEIWLGVNSLKGPIPEELGRLKNLQVLHLEQNQLDGHIPLAIANCSMLIELFLGGNSLSGQIPSSFGQLQNMQALSLYGSQRLTGKIPEELGNCSQLEWLDIGWSPNLDGPIPSSLFRL

HMMPfam: PF13516
265-288 LRR_6,Leucine Rich repeat

LKNLQVLHLEQNQLDGHIPLAIAN

HMMPfam: PF13516
265-288 LRR_6,Leucine Rich repeat

LKNLQVLHLEQNQLDGHIPLAIAN

ProfileScan: PS51450
IPR001611
267-288 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQVLHLEQNQLDGHIPLAIAN

ProfileScan: PS51450
IPR001611
267-288 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQVLHLEQNQLDGHIPLAIAN

ProfileScan: PS51450
IPR001611
291-313 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

MLIELFLGGNSLSGQIPSSFGQL

ProfileScan: PS51450
IPR001611
291-313 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

MLIELFLGGNSLSGQIPSSFGQL

HMMPfam: PF00560
IPR001611
292-313 LRR_1
Leucine-rich repeat

LIELFLGGNSLSGQIPSSFGQL

HMMPfam: PF00560
IPR001611
292-313 LRR_1
Leucine-rich repeat

LIELFLGGNSLSGQIPSSFGQL

Gene3D: G3DSA:3.80.10.10
370-590 G3DSA:3.80.10.10

LAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQAL

Gene3D: G3DSA:3.80.10.10
370-590 G3DSA:3.80.10.10

LAELGLTKNNTGTLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQAL

superfamily: SSF52047
382-692 SSF52047,LRR

TLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFR

superfamily: SSF52047
382-692 SSF52047,LRR

TLSPRIGNVTTLTNLDLGICTFRGSIPKELANLTALERLNLGSNLFDGEIPQDLGRLINLQHLFLDTNNLHGAVPQSITSLSKLQDLFIHRNSLSGRISHLSFENWTQMTDLRMHENKFTGSIPESLGDLSQLQILYMFSNSFSGTVPSIVGKLQKLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFR

ProfileScan: PS51450
IPR001611
416-439 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

ALERLNLGSNLFDGEIPQDLGRLI

ProfileScan: PS51450
IPR001611
416-439 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

ALERLNLGSNLFDGEIPQDLGRLI

ProfileScan: PS51450
IPR001611
440-462 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQHLFLDTNNLHGAVPQSITSL

ProfileScan: PS51450
IPR001611
440-462 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

NLQHLFLDTNNLHGAVPQSITSL

ProfileScan: PS51450
IPR001611
464-486 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLQDLFIHRNSLSGRISHLSFEN

ProfileScan: PS51450
IPR001611
464-486 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLQDLFIHRNSLSGRISHLSFEN

ProfileScan: PS51450
IPR001611
537-560 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLTQMDLSKNLLIGEIPRSLGNCS

ProfileScan: PS51450
IPR001611
537-560 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

KLTQMDLSKNLLIGEIPRSLGNCS

HMMPfam: PF13855
537-597 LRR_8,Leucine rich repeat

KLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKL

HMMPfam: PF13855
537-597 LRR_8,Leucine rich repeat

KLTQMDLSKNLLIGEIPRSLGNCSSLKQLDLSKNAISGRVPDEIGTICKSLQALGVEGNKL

ProfileScan: PS51450
IPR001611
561-583 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKQLDLSKNAISGRVPDEIGTI

ProfileScan: PS51450
IPR001611
561-583 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKQLDLSKNAISGRVPDEIGTI

ProfileScan: PS51450
IPR001611
586-609 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLQALGVEGNKLTGNLPVTLENCT

ProfileScan: PS51450
IPR001611
586-609 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLQALGVEGNKLTGNLPVTLENCT

Gene3D: G3DSA:3.80.10.10
591-735 G3DSA:3.80.10.10

GVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTS

Gene3D: G3DSA:3.80.10.10
591-735 G3DSA:3.80.10.10

GVEGNKLTGNLPVTLENCTLLERLKVGNNSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTS

superfamily: SSF52047
619-864 SSF52047,LRR

NSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFD

superfamily: SSF52047
619-864 SSF52047,LRR

NSLKGELGMNISKLSSLKILSLSLNNFQGQFPLLNATSIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQFEGSLPATLNNLQGFKLTSEGDAAGADRLYQDLFLSVKGNLFAPYQYVLRTTTLLDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFD

ProfileScan: PS51450
IPR001611
634-655 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKILSLSLNNFQGQFPLLNAT

ProfileScan: PS51450
IPR001611
634-655 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

SLKILSLSLNNFQGQFPLLNAT

HMMPfam: PF13855
656-716 LRR_8,Leucine rich repeat

SIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQ

HMMPfam: PF13855
656-716 LRR_8,Leucine rich repeat

SIELIDLRGNRFTGELPSSLGKYQTLRVLSLGNNSFRGSLTSMDWLWNLTQLQVLDLSNNQ

ProfileScan: PS51450
IPR001611
680-702 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

TLRVLSLGNNSFRGSLTSMDWLW

ProfileScan: PS51450
IPR001611
680-702 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

TLRVLSLGNNSFRGSLTSMDWLW

ProfileScan: PS51450
IPR001611
706-729 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

QLQVLDLSNNQFEGSLPATLNNLQ

ProfileScan: PS51450
IPR001611
706-729 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

QLQVLDLSNNQFEGSLPATLNNLQ

Gene3D: G3DSA:3.80.10.10
771-880 G3DSA:3.80.10.10

LDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLS

Gene3D: G3DSA:3.80.10.10
771-880 G3DSA:3.80.10.10

LDLSTNQLTGKLPVSMGDLVGLRYLNLSHNNFSGEIPSSYGKITQLEQLDLSFNHLQGSIPTLLANLDSLASFNVSFNQLEGEIPQKKHFDTFDNSSFIGNLGLCGRPLS

ProfileScan: PS51450
IPR001611
791-813 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

GLRYLNLSHNNFSGEIPSSYGKI

ProfileScan: PS51450
IPR001611
791-813 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

GLRYLNLSHNNFSGEIPSSYGKI

HMMPfam: PF00560
IPR001611
792-809 LRR_1
Leucine-rich repeat

LRYLNLSHNNFSGEIPSS

HMMPfam: PF00560
IPR001611
792-809 LRR_1
Leucine-rich repeat

LRYLNLSHNNFSGEIPSS

ProfileScan: PS51450
IPR001611
815-837 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

QLEQLDLSFNHLQGSIPTLLANL

HMMPfam: PF00560
IPR001611
815-837 LRR_1
Leucine-rich repeat

QLEQLDLSFNHLQGSIPTLLANL

ProfileScan: PS51450
IPR001611
815-837 LRR,Leucine-rich repeat profile.
Leucine-rich repeat

QLEQLDLSFNHLQGSIPTLLANL

HMMPfam: PF00560
IPR001611
815-837 LRR_1
Leucine-rich repeat

QLEQLDLSFNHLQGSIPTLLANL


List of References

Jo Ann Banks, Tomoaki Nishiyama, Mitsuyasu Hasebe, John L Bowman, Michael Gribskov, Claude dePamphilis, Victor A Albert, Naoki Aono, Tsuyoshi Aoyama, Barbara A Ambrose, Neil W Ashton, Michael J Axtell, Elizabeth Barker, Michael S Barker, Jeffrey L Bennetzen, Nicholas D Bonawitz, Clint Chapple, Chaoyang Cheng, Luiz Gustavo Guedes Correa, Michael Dacre, Jeremy DeBarry, Ingo Dreyer, Marek Elias, Eric M Engstrom, Mark Estelle, Liang Feng, Cédric Finet, Sandra K Floyd, Wolf B Frommer, Tomomichi Fujita, Lydia Gramzow, Michael Gutensohn, Jesper Harholt, Mitsuru Hattori, Alexander Heyl, Tadayoshi Hirai, Yuji Hiwatashi, Masaki Ishikawa, Mineko Iwata, Kenneth G Karol, Barbara Koehler, Uener Kolukisaoglu, Minoru Kubo, Tetsuya Kurata, Sylvie Lalonde, Kejie Li, Ying Li, Amy Litt, Eric Lyons, Gerard Manning, Takeshi Maruyama, Todd P Michael, Koji Mikami, Saori Miyazaki, Shin-ichi Morinaga, Takashi Murata, Bernd Mueller-Roeber, David R Nelson, Mari Obara, Yasuko Oguri, Richard G Olmstead, Naoko Onodera, Bent Larsen Petersen, Birgit Pils, Michael Prigge, Stefan A Rensing, Diego Mauricio Riaño-Pachón, Alison W Roberts, Yoshikatsu Sato, Henrik Vibe Scheller, Burkhard Schulz, Christian Schulz, Eugene V Shakirov, Nakako Shibagaki, Naoki Shinohara, Dorothy E Shippen, Iben Sørensen, Ryo Sotooka, Nagisa Sugimoto, Mamoru Sugita, Naomi Sumikawa, Milos Tanurdzic, Günter Theissen, Peter Ulvskov, Sachiko Wakazuki, Jing-Ke Weng, William W G T Willats, Daniel Wipf, Paul G Wolf, Lixing Yang, Andreas D Zimmer, Qihui Zhu, Therese Mitros, Uffe Hellsten, Dominique Loqué, Robert Otillar, Asaf Salamov, Jeremy Schmutz, Harris Shapiro, Erika Lindquist, Susan Lucas, Daniel Rokhsar, Igor V Grigoriev
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science: 2011, 332(6032);960-3
PubMed:21551031 WorldCat.org DOI (I p)

Jo Ann Banks, Tomoaki Nishiyama, Mitsuyasu Hasebe, John L Bowman, Michael Gribskov, Claude dePamphilis, Victor A Albert, Naoki Aono, Tsuyoshi Aoyama, Barbara A Ambrose, Neil W Ashton, Michael J Axtell, Elizabeth Barker, Michael S Barker, Jeffrey L Bennetzen, Nicholas D Bonawitz, Clint Chapple, Chaoyang Cheng, Luiz Gustavo Guedes Correa, Michael Dacre, Jeremy DeBarry, Ingo Dreyer, Marek Elias, Eric M Engstrom, Mark Estelle, Liang Feng, Cédric Finet, Sandra K Floyd, Wolf B Frommer, Tomomichi Fujita, Lydia Gramzow, Michael Gutensohn, Jesper Harholt, Mitsuru Hattori, Alexander Heyl, Tadayoshi Hirai, Yuji Hiwatashi, Masaki Ishikawa, Mineko Iwata, Kenneth G Karol, Barbara Koehler, Uener Kolukisaoglu, Minoru Kubo, Tetsuya Kurata, Sylvie Lalonde, Kejie Li, Ying Li, Amy Litt, Eric Lyons, Gerard Manning, Takeshi Maruyama, Todd P Michael, Koji Mikami, Saori Miyazaki, Shin-ichi Morinaga, Takashi Murata, Bernd Mueller-Roeber, David R Nelson, Mari Obara, Yasuko Oguri, Richard G Olmstead, Naoko Onodera, Bent Larsen Petersen, Birgit Pils, Michael Prigge, Stefan A Rensing, Diego Mauricio Riaño-Pachón, Alison W Roberts, Yoshikatsu Sato, Henrik Vibe Scheller, Burkhard Schulz, Christian Schulz, Eugene V Shakirov, Nakako Shibagaki, Naoki Shinohara, Dorothy E Shippen, Iben Sørensen, Ryo Sotooka, Nagisa Sugimoto, Mamoru Sugita, Naomi Sumikawa, Milos Tanurdzic, Günter Theissen, Peter Ulvskov, Sachiko Wakazuki, Jing-Ke Weng, William W G T Willats, Daniel Wipf, Paul G Wolf, Lixing Yang, Andreas D Zimmer, Qihui Zhu, Therese Mitros, Uffe Hellsten, Dominique Loqué, Robert Otillar, Asaf Salamov, Jeremy Schmutz, Harris Shapiro, Erika Lindquist, Susan Lucas, Daniel Rokhsar, Igor V Grigoriev
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science: 2011, 332(6032);960-3
PubMed:21551031 WorldCat.org DOI (I p)





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