PRGDB00063248 (RGH2B)
| RGH2B | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 20513849 (AF427791) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Hordeum vulgare subsp. vulgare |
DNA Sequence
ATGTATGGTGTTTGGTTTGCTTCAGGCAGGAACATGGAGATGATGGAGGCGCCGGTGAGTGCATCACAGGGAGCCATGCGGTCCCTTCCGAGAAAGCTCGAGTCTTTGCTATCTGGACCCAATCAGGGGCTCCGGCCGGAGGAGAAGAAGAAGCTGCGCTTCCTCCAAGCAGATCTGCAGGGACTAATCGACAGCTACCTATTTGAGCCGTCGGAGGTGGAGTCCCCTGCCTCGACGGCCAGCTTCTGGATGAAGGATGTGCGCGACCTGTCGTATGACATCGACGACTTCATCTACGAGCTCGGCCACGTTGCCGTCAGCGGTGCCAGGATCGGCGCCGCCCAGATCCAGAAGGTCCCCGGCGTCAAGATCTCTCGGTTCCCGGACAAGCTGAAACGGCGACAGTGGATCTCCGACGAGATCTCGGGTTTCAGGACTCGCGTCAAGGAAGCAATTCAACGGCACAAAACTTATCTTGGTGGCTGCAGATGGCGGCCTAGCAGCAGTAGCAGTCAGCACTCTGCTCCATCACCATGTGGCCGGGCTGCCATTCGCCTTGTTGGTATGGACAGCCCCGTCGAACAGCTCTGCGGCTGGCTGGCTAACGATGGACAGCCGGAGCACAAGGTGGCGTCCATTGTTGGGACTAGTGGGGTTGGGAAGACCACCCTCGCCAGACAAGTTTACCATAAGCTTGGAGGCCAGTTCGAGTGCCGGGCTTTTGTGCAGGCATCGCCAAAACAAGACATGAAGATGCTCCTCACCAGCATACTCTCGCAAGTTCGACGGCACCACCTCCCCGACTCTTTCGACGTGCATAAGCTGCTTTTCGAGATCGAAGCACACCTGCAAGATAAGACGTACATAATTGTAATTGATAATCTGCAGGCGTCATCAACCTGGGATATTATTAATCATGCTTTGCCAAAGGAAAATTGTTGCAGTAGAATATTGACAACCACAGAAGTTGATGCTATAGCTCAGACATGCTGTGCAGATACCTCCAAGTATATCTTCAAGAAGGAATCGCTTAGTGAAGATGAGTCAAGAGAACTGTTTCTAGGTACAGTTTTTGGCCATGAAGCCGGATGTCCTCAGGTTCTCAAGGAAGTTTCAAATGAAATTATAAAAAGAAGTGGTGGCTTGCCGCTAGCAATTATTATATTGGCCAGTCTCTTGGTAGGTCAGCCAGCGAGCAGCATAGAGCACTGGAATCACATAAAGAATTCACTGAGTTCCGATTCAAGCACAAATACTAGTTTGGAAGGGATAAAACAAGTTCTCAACCTTGGCTATGAGTATCTTCCTCACTATCTAAAAGCATGCATGCTATATCTGTGTATGTATGAAGAGGACTGCATAATCTGGAAGGATGATTTGGTGAAGCAGTGGATAGCCGAAGGTTTCATCCATGCAATGGATGGGAACGGTGGGAAGGAAGTTGCACGGAGCTATTTTGATGAACTTGTTAACAGAGGAATGATCCAACCAATGGATATCAACTGCAATGATGAAATTCTTTCATTCAGCGTGCACACCATGGTACTTCACTTCATTAGATACAAGTCCGTAGAAGAGAATTTCAGCATTGCATTAGATCATTCCCAGACCACTATAAGGCTTGCTGACAAAGTTCGTCGGCTGGCTCTCCACTTCGGCAATGTTGAACATGCCACACCGCCAATGCCGGCGAGTATGAGACTGTCACAAGTTCGATCTCTTGCCTTTTCTGGATTGCTCAAGTGCATGCCTTCCTTTGTGGAGTTCCGGTTTATTCAGGTTCTGATCCTTAAATTATGGGCTGACCCTGATAACAGGAGTGACAACTTTATTGGCTCTGATGACCTGAGTGGCAACATCACTGAACCTGATGACTTGAGTGACAATCTCACTGAACATGATGACCTGAGTTTGAATCTAAGTGAAATTTCAGAACTCTTCCGACTGAGGTATTTTCATCTTGATGCATGTCATATGAGTGTGGAGCTTCCAACCCAGATGAAACGGCTAAAAGATTTGGTGGCATGTGAAATTGATGCCAATGTAACTGCAGTCCCATCAGATATTGTTGATCTGCCGGGCTTGTTCTTCCTCAGTATTCCTAGTGAGGCTCGTCTGCCCACTGGTATTGGTCGCATGACATCTCTTTGCACTCTGGGCATAATTGACCTCAGCAATAACTCAACAGAAAATATTATGTGCCTTGGTGAGCTGACCAATCTCCAGGATCTTCGTCTCACATGTTCCACATTACAGGCTGATAACCTGGAAAAGAATTTGGAATGCTTGGGCTTGATAATTCGGAAACTAAGCAATCTCAAATGTGTAACTCTGGTACCTGTAGTCTCCTCTCATGTAAAAACTCAGGATGATGCCAGTTCTTCAAGGATGACCATTTCTTGGGACGGCTTCACTACCGTGTCTCTTTCTCCAGCCCTTCTTCAGAGACTAGAGTTGTCGCGGCGCTGCTTCATCTTGTCCAGCTTACCTGAGTGGACCAAGGATCTTACGAATCTTGGAATTTTAAAGATGGCTGTTAGCAAGGTGTCAAGCGAAGATGTTGTTATTCTCAAAGGATTGCCTTCCCTCACCGCTCTCTCACTGTTCGTATGGACCGCACCCACAAGAAGGATCATCTTTGACAATGAGGGATTCTTGGTTCTCAAGTACTTCAAGTTTGTGTGTGTTGCGCCATGCCTGTCTTTTTTGGATGGAGCAATGCCCAAAGTCCATAATCTCAAGCTAGGTTTTAATGCTAACAGAATGGAGCAATACAGCCTGGTAGCTGCTGGGTTTGAGCACCTGATTGGCCTAAAAAAGATCTCCATAAAAATTGGGGGAGCCGGTGCTGATGAATGTGATAGAAGGTCTGCACAGTTGGTGTTGACTGATGCCATTAGCAAGCATCCAAACACCTCCATCATCAGTGTACAATGGGTCAACTCGAAATTTTGTGGTGAACAAGATGTGAACGCAGGGGAATCGAGCTCGTACCAGCAGGATACAGGTAATCTTCTCTTTCCCTCTCATTTGACTCTTTGTCCCTTCAACTCAGTTTGTTGCTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| RGH2B | RGH2B [Hordeum vulgare subsp. vulgare]. | MYGVWFASGRNMEMMEAPVSASQGAMRSLPRKLESLLSGPNQGLRPEEKKKLRFLQADLQGLIDSYLFEPSEVESPASTASFWMKDVRDLSYDIDDFIYELGHVAVSGARIGAAQIQKVPGVKISRFPDKLKRRQWISDEISGFRTRVKEAIQRHKTYLGGCRWRPSSSSSQHSAPSPCGRAAIRLVGMDSPVEQLCGWLANDGQPEHKVASIVGTSGVGKTTLARQVYHKLGGQFECRAFVQASPKQDMKMLLTSILSQVRRHHLPDSFDVHKLLFEIEAHLQDKTYIIVIDNLQASSTWDIINHALPKENCCSRILTTTEVDAIAQTCCADTSKYIFKKESLSEDESRELFLGTVFGHEAGCPQVLKEVSNEIIKRSGGLPLAIIILASLLVGQPASSIEHWNHIKNSLSSDSSTNTSLEGIKQVLNLGYEYLPHYLKACMLYLCMYEEDCIIWKDDLVKQWIAEGFIHAMDGNGGKEVARSYFDELVNRGMIQPMDINCNDEILSFSVHTMVLHFIRYKSVEENFSIALDHSQTTIRLADKVRRLALHFGNVEHATPPMPASMRLSQVRSLAFSGLLKCMPSFVEFRFIQVLILKLWADPDNRSDNFIGSDDLSGNITEPDDLSDNLTEHDDLSLNLSEISELFRLRYFHLDACHMSVELPTQMKRLKDLVACEIDANVTAVPSDIVDLPGLFFLSIPSEARLPTGIGRMTSLCTLGIIDLSNNSTENIMCLGELTNLQDLRLTCSTLQADNLEKNLECLGLIIRKLSNLKCVTLVPVVSSHVKTQDDASSSRMTISWDGFTTVSLSPALLQRLELSRRCFILSSLPEWTKDLTNLGILKMAVSKVSSEDVVILKGLPSLTALSLFVWTAPTRRIIFDNEGFLVLKYFKFVCVAPCLSFLDGAMPKVHNLKLGFNANRMEQYSLVAAGFEHLIGLKKISIKIGGAGADECDRRSAQLVLTDAISKHPNTSIISVQWVNSKFCGEQDVNAGESSSYQQDTGNLLFPSHLTLCPFNSVCC |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF196 | 23-895 | PTHR23155:SF196,OS11G0225300 PROTEIN | QGAMRSLPRKLESLLSGPNQGLRPEEKKKLRFLQADLQGLIDSYLFEPSEVESPASTASFWMKDVRDLSYDIDDFIYELGHVAVSGARIGAAQIQKVPGVKISRFPDKLKRRQWISDEISGFRTRVKEAIQRHKTYLGGCRWRPSSSSSQHSAPSPCGRAAIRLVGMDSPVEQLCGWLANDGQPEHKVASIVGTSGVGKTTLARQVYHKLGGQFECRAFVQASPKQDMKMLLTSILSQVRRHHLPDSFDVHKLLFEIEAHLQDKTYIIVIDNLQASSTWDIINHALPKENCCSRILTTTEVDAIAQTCCADTSKYIFKKESLSEDESRELFLGTVFGHEAGCPQVLKEVSNEIIKRSGGLPLAIIILASLLVGQPASSIEHWNHIKNSLSSDSSTNTSLEGIKQVLNLGYEYLPHYLKACMLYLCMYEEDCIIWKDDLVKQWIAEGFIHAMDGNGGKEVARSYFDELVNRGMIQPMDINCNDEILSFSVHTMVLHFIRYKSVEENFSIALDHSQTTIRLADKVRRLALHFGNVEHATPPMPASMRLSQVRSLAFSGLLKCMPSFVEFRFIQVLILKLWADPDNRSDNFIGSDDLSGNITEPDDLSDNLTEHDDLSLNLSEISELFRLRYFHLDACHMSVELPTQMKRLKDLVACEIDANVTAVPSDIVDLPGLFFLSIPSEARLPTGIGRMTSLCTLGIIDLSNNSTENIMCLGELTNLQDLRLTCSTLQADNLEKNLECLGLIIRKLSNLKCVTLVPVVSSHVKTQDDASSSRMTISWDGFTTVSLSPALLQRLELSRRCFILSSLPEWTKDLTNLGILKMAVSKVSSEDVVILKGLPSLTALSLFVWTAPTRRIIFDNEGFLVLKYFKFVC |
| HMMPanther: PTHR23155 | 23-895 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | QGAMRSLPRKLESLLSGPNQGLRPEEKKKLRFLQADLQGLIDSYLFEPSEVESPASTASFWMKDVRDLSYDIDDFIYELGHVAVSGARIGAAQIQKVPGVKISRFPDKLKRRQWISDEISGFRTRVKEAIQRHKTYLGGCRWRPSSSSSQHSAPSPCGRAAIRLVGMDSPVEQLCGWLANDGQPEHKVASIVGTSGVGKTTLARQVYHKLGGQFECRAFVQASPKQDMKMLLTSILSQVRRHHLPDSFDVHKLLFEIEAHLQDKTYIIVIDNLQASSTWDIINHALPKENCCSRILTTTEVDAIAQTCCADTSKYIFKKESLSEDESRELFLGTVFGHEAGCPQVLKEVSNEIIKRSGGLPLAIIILASLLVGQPASSIEHWNHIKNSLSSDSSTNTSLEGIKQVLNLGYEYLPHYLKACMLYLCMYEEDCIIWKDDLVKQWIAEGFIHAMDGNGGKEVARSYFDELVNRGMIQPMDINCNDEILSFSVHTMVLHFIRYKSVEENFSIALDHSQTTIRLADKVRRLALHFGNVEHATPPMPASMRLSQVRSLAFSGLLKCMPSFVEFRFIQVLILKLWADPDNRSDNFIGSDDLSGNITEPDDLSDNLTEHDDLSLNLSEISELFRLRYFHLDACHMSVELPTQMKRLKDLVACEIDANVTAVPSDIVDLPGLFFLSIPSEARLPTGIGRMTSLCTLGIIDLSNNSTENIMCLGELTNLQDLRLTCSTLQADNLEKNLECLGLIIRKLSNLKCVTLVPVVSSHVKTQDDASSSRMTISWDGFTTVSLSPALLQRLELSRRCFILSSLPEWTKDLTNLGILKMAVSKVSSEDVVILKGLPSLTALSLFVWTAPTRRIIFDNEGFLVLKYFKFVC |
| superfamily: SSF52540 | 185-419 | SSF52540 | RLVGMDSPVEQLCGWLANDGQPEHKVASIVGTSGVGKTTLARQVYHKLGGQFECRAFVQASPKQDMKMLLTSILSQVRRHHLPDSFDVHKLLFEIEAHLQDKTYIIVIDNLQASSTWDIINHALPKENCCSRILTTTEVDAIAQTCCADTSKYIFKKESLSEDESRELFLGTVFGHEAGCPQVLKEVSNEIIKRSGGLPLAIIILASLLVGQPASSIEHWNHIKNSLSSDSSTNT |
| Gene3D: G3DSA:3.40.50.300 | 186-225 | G3DSA:3.40.50.300 | LVGMDSPVEQLCGWLANDGQPEHKVASIVGTSGVGKTTLA |
| HMMPfam: PF00931 IPR002182
|
190-474 | NB-ARC,NBS NB-ARC
|
DSPVEQLCGWLANDGQPEHKVASIVGTSGVGKTTLARQVYHKLGGQFECRAFVQASPKQDMKMLLTSILSQVRRHHLPDSFDVHKLLFEIEAHLQDKTYIIVIDNLQASSTWDIINHALPKENCCSRILTTTEVDAIAQTCCADTSKYIFKKESLSEDESRELFLGTVFGHEAGCPQVLKEVSNEIIKRSGGLPLAIIILASLLVGQPASSIEHWNHIKNSLSSDSSTNTSLEGIKQVLNLGYEYLPHYLKACMLYLCMYEEDCIIWKDDLVKQWIAEGFIHAMD |
| FPrintScan: PR00364 IPR000767
|
210-225 | DISEASERSIST Disease resistance protein
|
VASIVGTSGVGKTTLA |
| Gene3D: G3DSA:3.40.50.300 | 226-296 | G3DSA:3.40.50.300 | RQVYHKLGGQFECRAFVQASPKQDMKMLLTSILSQVRRHHLPDSFDVHKLLFEIEAHLQDKTYIIVIDNLQ |
| FPrintScan: PR00364 IPR000767
|
282-296 | DISEASERSIST Disease resistance protein
|
HLQDKTYIIVIDNLQ |
| FPrintScan: PR00364 IPR000767
|
379-393 | DISEASERSIST Disease resistance protein
|
SGGLPLAIIILASLL |
| superfamily: SSF52047 | 543-869 | SSF52047,LRR | DKVRRLALHFGNVEHATPPMPASMRLSQVRSLAFSGLLKCMPSFVEFRFIQVLILKLWADPDNRSDNFIGSDDLSGNITEPDDLSDNLTEHDDLSLNLSEISELFRLRYFHLDACHMSVELPTQMKRLKDLVACEIDANVTAVPSDIVDLPGLFFLSIPSEARLPTGIGRMTSLCTLGIIDLSNNSTENIMCLGELTNLQDLRLTCSTLQADNLEKNLECLGLIIRKLSNLKCVTLVPVVSSHVKTQDDASSSRMTISWDGFTTVSLSPALLQRLELSRRCFILSSLPEWTKDLTNLGILKMAVSKVSSEDVVILKGLPSLTALSLF |
| Gene3D: G3DSA:3.80.10.10 | 645-681 | G3DSA:3.80.10.10 | ELFRLRYFHLDACHMSVELPTQMKRLKDLVACEIDAN |
| Gene3D: G3DSA:3.80.10.10 | 713-868 | G3DSA:3.80.10.10 | MTSLCTLGIIDLSNNSTENIMCLGELTNLQDLRLTCSTLQADNLEKNLECLGLIIRKLSNLKCVTLVPVVSSHVKTQDDASSSRMTISWDGFTTVSLSPALLQRLELSRRCFILSSLPEWTKDLTNLGILKMAVSKVSSEDVVILKGLPSLTALSL |
| FPrintScan: PR00364 IPR000767
|
714-730 | DISEASERSIST Disease resistance protein
|
TSLCTLGIIDLSNNSTE |
List of References
Fusheng Wei, Rod A Wing, Roger P Wise
Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley.
Plant Cell: 2002, 14(8);1903-17
PubMed:12172030
WorldCat.org
(P p)
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