PRGDB00063442 (disease resistance-like protein)

disease resistance-like protein
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	13310470 (AF338971)
Gene Class	NL
Domain Type	NBS, LRR
Gene Species	Brassica rapa
	Comment?

Brassica rapa cultivar R500 disease resistance-like protein (RGA7) gene, partial cds.

DNA Sequence

ATGGAGAATGTGAAGGAAGTGTGTAACAGATATGGAGTTGAGCGTCTACAGGGAGAGTTCTTATGCAGAATGTTTCGAGAGAGAGACTCGGTTTCTTGTTCGAGCATGATAAAGGAAAGGTTCAGGCGTAAAAGGGTTTTGATTGTACTTGATGATGTAGATAGATCTGAGCAGCTGGATGGATTGGTTAAGGAGACTGGTTGGTTTGGTCCTGGAAGCAGAATCATTGTTACAACGAGAGATAGACATTTGCTAGTTTCTCATGGCATAGAACTGATATATAAAGTTAAGTGTTTACCCGAAAAAGAAGCTTTACATCTCTTTTGCAACTATGCTTTCAGAAACGAGACTATAGCTCCAGAGTTTAGGGTGTTAGCAGTT

Protein sequences

Name	Description	Sequence
disease resistance-like protein	disease resistance-like protein [Brassica rapa].	MENVKEVCNRYGVERLQGEFLCRMFRERDSVSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAV

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR11017:SF20	15-127	PTHR11017:SF20,SUBFAMILY NOT NAMED	RLQGEFLCRMFRERDSVSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAV
HMMPanther: PTHR11017	15-127	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	RLQGEFLCRMFRERDSVSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAV
HMMPfam: PF00931 IPR002182	30-121	NB-ARC,NBS NB-ARC	SVSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPE
superfamily: SSF52540	36-114	SSF52540	MIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFR

List of References

M Fourmann, F Chariot, N Froger, R Delourme, D Brunel
Expression, mapping, and genetic variability of Brassica napus disease resistance gene analogues.
Genome: 2001, 44(6);1083-99
PubMed:11768212 WorldCat.org (P p)

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Analyses

Blast

Blast matches against Reference R-Genes. Show