PRGDB00063460 (Pto-like protein kinase D)

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Pto-like protein kinase D
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 13021866 (AF318493)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Solanum habrochaites

Comment?

Lycopersicon hirsutum Pto-like protein kinase D (LhirPtoD) mRNA, complete cds.

DNA Sequence

ATGGGAACCAACTATTCCAAGCCAACAACTTCCATAAATGATGCTTCCAATTTGAGAAATCGCGTTCCTTTTGAAAGTTTTCGAGTTCCTTTTGTAGATTTGCAGGAAGCAACTAATAACTTTGATGACAAGTTTCTGATTGGAGTGGGTATATTTGGTAAGGTTTACAGGGGTGTTTTGCGTGATGGTACAAAGGTGGCCCTGAAAAGACGTAAGCCTGAGTCTCCACAAGGTTTTGAAGAGTTCCGAACAGAAATTGAGATACTCTCACACTGCAGCCATCCACATCTAGTTTCACTGATAGGATACTGTGATGAAAGAAATGAGATGATTCTAATTTATGACTACATGGAGAATGGGAACCTCAGTAAACGTTTGTATGGATCAGATCTATGTCTTCCCACTATGAGCTGGGAGCAGAGGCTGGAGATATGCATCGGGGCAGCCAGAGGTCTTCACTACCTTCATAACAGTGCAGTTATACATCGTGATGTCAAGTCTACAAACATATTGCTTGATGAGAATTTTGTGGCAAAAATTACTGATTTTGGAATATCCAAGACTATGCCTGAGTTTGATCAAACCCATCTTAGCACAATGGTGCAAGGAAGTATAGGCTACATTGACCCTGAATATTTTATAAGGAGACAACTGACAAAAAAATCTGATGTTTATTCTTTCGGTGTTGTTTTATTCGAAGTTCTTTGTGCTAGGCCTGCCATTAGTCGTTCACATATGATCAGTTTAGCTGAATGGGCAGTAGAGACGCAGAAGATGGGACAGTTGGAACAAATTGTAGATCCCACTATTGTGGCCAAAATAAGACCAGAGTCCCTCAGGATGTTTGGAGAAACGGCAGTGAAATGCTTAGCTTCGTCTAGTGAAAATAGGCCATCAATGGGTGATGTGCTGTGGAAACTGGAGTATGCACTTCATCTCCAAGAGCCTATCATTCAAGATAATCCTGAATGA


Protein sequences

Name Description Sequence
Pto-like protein kinase D Pto-like protein kinase D [Solanum habrochaites].

MGTNYSKPTTSINDASNLRNRVPFESFRVPFVDLQEATNNFDDKFLIGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVLWKLEYALHLQEPIIQDNPE

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
13-322 Kinase_like
Protein kinase-like domain

NDASNLRNRVPFESFRVPFVDLQEATNNFDDKFLIGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVLWKLEYALHLQEPIIQDNP

HMMPanther: PTHR24420:SF785
25-315 PTHR24420:SF785

ESFRVPFVDLQEATNNFDDKFLIGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVLWKLEYALHLQE

HMMPanther: PTHR24420
25-315 PTHR24420,FAMILY NOT NAMED

ESFRVPFVDLQEATNNFDDKFLIGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVLWKLEYALHLQE

Gene3D: G3DSA:3.30.200.20
29-102 G3DSA:3.30.200.20

VPFVDLQEATNNFDDKFLIGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIG

ProfileScan: PS50011
IPR000719
41-318 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FDDKFLIGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVLWKLEYALHLQEPII

HMMPfam: PF07714
IPR001245
47-304 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase

IGVGIFGKVYRGVLRDGTKVALKRRKPESPQGFEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVL

PatternScan: PS00107
IPR017441
47-69 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

IGVGIFGKVYRGVLRDGTKVALK

Gene3D: G3DSA:1.10.510.10
103-304 G3DSA:1.10.510.10

YCDERNEMILIYDYMENGNLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKITDFGISKTMPEFDQTHLSTMVQGSIGYIDPEYFIRRQLTKKSDVYSFGVVLFEVLCARPAISRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVL

PatternScan: PS00108
IPR008271
160-172 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VIHRDVKSTNILL


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Analyses

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