PRGDB00063660 (disease resistance-like protein GS4B-3)

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disease resistance-like protein GS4B-3
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 22037370 (AF403280)
Gene Class Unknown
Domain Type LRR
Gene Species Glycine max

Comment?

Glycine max disease resistance-like protein GS4B-3 gene, partial cds.

DNA Sequence

GTCTGGATTTCTCCATATCTGACAAAGAAGAAACAGTAGAATGGAATGAAAACGCCTTCATGAAGATGGAAAACCTTAAAATACTTATTATTAGAAATGGAAAATTTTCCAAAGGTCCCAATTATTTTCCACAAGGTTTGAGAGTACTGGAATGGCACAGATATCCTTCAAATTGTTTACCATCTAACTTTGATCCTATCAACCTTGTTATATGCAAGTTACCTGACAGCTCCATTACGTCATTTGAGTTCCATGGCTCATCCAAGGCAATTTTAAATTTTGACCGGTGCGAATTTTTAACAAAGATACCTGATGTATCTGATCTCCCAAATTTGAAGGAACTTTCATTTAATTGGTGTGAGAGTTTAGTTGCAGTTGATGACTCAATTGGTTTTCTGAATAAACTTAAAAAATTGAGTGCTTATGGTTGCAGG


Protein sequences

Name Description Sequence
disease resistance-like protein GS4B-3 disease resistance-like protein GS4B-3 [Glycine max].

LDFSISDKEETVEWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSITSFEFHGSSKAILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKKLSAYGCR

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017:SF20
1-143 PTHR11017:SF20,SUBFAMILY NOT NAMED

LDFSISDKEETVEWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSITSFEFHGSSKAILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKKLSAYGC

HMMPanther: PTHR11017
1-143 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

LDFSISDKEETVEWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSITSFEFHGSSKAILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKKLSAYGC

Gene3D: G3DSA:3.80.10.10
13-143 G3DSA:3.80.10.10

EWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSITSFEFHGSSKAILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKKLSAYGC

superfamily: SSF52058
16-144 SSF52058,LRR

ENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSITSFEFHGSSKAILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKKLSAYGCR


List of References

A. Graham, F. Marek, C. Shoemaker
PCR Sampling of disease resistance-like sequences from a disease resistance gene cluster in soybean.
Theor. Appl. Genet.: 2002, 105(1);50-57
PubMed:12582561 WorldCat.org DOI (I p)





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Analyses

Blast

Blast matches against Reference R-Genes. Show


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