PRGDB00063890 (Zm.359)
| Zm.359 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 2735016 (U82481) |
| Gene Class | RLK |
| Domain Type | Ser-Thr Kinase, Receptor-Like Kinase |
| Gene Species | Zea mays |
DNA Sequence
CATGGTCTCCTCTCCTCGGCTCCTCTTCCTGCTCCTCGCCGGCGCCTCGCTATGCTGTGTGGCGGCGCAGAAGACGGACACGCTGCGGCAGGGGGAGTCGCTGTCCGGGGCGGCGACGCTGGTGTCCTCGCCGGAGGGGGTGTTCGAGGCGGGCTTCTTCGCGCCGGACCCCAAGCAGCCTTCTCGCCAGTACCTCGGCATCTGGTACCACAGCATCTCGCCGCGGACCGTCGTCTGGGTCGCCAACCGCGTCGCGCCGGCCACCTCGGCCTCGCCGTCGCTCACGCTCACCGTCACCGGCGACCTCCGCGTCCTCGACGGCACGGCGGCCAACGGCACCGCCGACGCGCCGCTGCTCTGGTCCTCCAACACCACCTCGCGCGCGGGCCCGCGGGGCGGCTACTCGGCGGTGCTCCAGGACACTGGCAGCCTCGAGGTGCGCAGCGAGGATGGGGTGCTCTGGGACAGCTTCTGGCACCCGACGGACACCATCCTGTCCGGGATGCGCATCACCTTGCAGGCGCCAGGGAGGGGCCCTAAGGAGCGGATGCTGTTCACGTCCTGGGCCAGCGAGACGGACCCTTCGCCGGGGCGATACGCGCTCGGCCTCGACCCGGGCAACTCCGGTCAGGCCTACATCTGGAAAGATGGCAACGTTACGTACTGGAGGTCGGGACAGTGGAATGGGGTGAATTTTATAGGCATTCCATGGAGGCCACTCTACAGGAGTGGGTTCACACCGGCAATTGATCCAGTGCTTGGAAATTATTACACATACACTGCAACAAACACTTCTTTGCAGAGGTTTGTTGTTTTGCCAAATGGCACAGACATCTGCTACATGGTTAGAAAATCTTCACAAGATTGGGAGCTTGTCTGGTACCAACCATCAAATGAGTGTGAATACTATGCTACATGTGGTCCAAATGCAAAATGCACTGCATCGCAAGATGGCAAGGCAAAATGCACCTGCCTAAAAGGTTTTCATCCGAAGTTGCAGGAGCAGTGGAATGCAGGAAATTGGAGTCAAGGTTGCATCAGGAGCCCACCTCTGGGTTGTGAGACCAATCAGTCTGGGGATGGATTTCTTCCAATGGGAAACATAAAGTGGCCTGATTTCTCATATTGGGTATCTACAGTGGGAGATGAGCCTGGATGCAGAACTGTCTGCCTTAACAACTGCTCATGCGGTGCTTATGTTTACACAGCTACAACAGGGTGCCTAGCCTGGGGTAACGAACTAATTGACATGCATGAGTTGCAAACAGGGGCATATACTCTAAACCTGAAGCTTCCTGCTTCTGAATTGCGAGGACATCACCCAATTTGGAAAATAGCCACGATAATATCAGCCATAGTGTTATTTGTTTTGGCTGCTTGCCTTCTTCTGTGGTGGAAGCATGGTAGAAATATTAAAGATGCAGTGCACGGAAGTTGGAGATCAAGGCATTCGTCTACCCAATCCCAGCAGAATAGTGCTATGCTGGACATCTCGCAGTCAATTCGTTTTGATGATGATGTGGAGGATGGAAAAAGTCATGAACTCAAAGTGTACTCGCTGGACCGTATAAGAACTGCTACAAGTAATTTTAGTGACTCTAACAAGCTTGGAGAAGGAGGATTTGGTCCTGTCTATATGGGAACTTTACCTGGGGGAGAAGAAGTAGCTGTGAAGAGGCTTTGTAGGAATTCAGGTCAAGGCCTTGAAGAATTCAAGAATGAGGTCATACTTATTGCAAAGTTGCAGCACCGCAATCTTGTAAGACTACTAGGGTGCTGCATACCGAGGGAAGAGAAGATCCTGGTGTATGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTTAATCCTGAAAAGCAACGGCTTCTAGACTGGAAGAAACGGTTTGATATAATCGAAGGCATTGCTAGAGGGCTGCTATATCTCCACCGGGATTCGAGGCTGCGAGTTGTTCACCGTGATCTCAAGGCCAGCAACATTCTCCTGGACGCGGACATGAAACCCAAGATATCAGATTTTGGAATGGCAAGGATGTTTGGAGGGGACCAAAACCAATTCAACACGAATCGGGTCGTCGGTACATTTGGCTACATGTCTCCTGAATACGCAATGGAAGGCATTTTTTCAGTCAAGTCTGACGTCTATGGCTTCGGAGTCCTGATCTTGGAGATCATCACAGGAAAGAGGGCTGTGAGCTTCCACTGTCACGAGGACTCCTTGAACATCGCTGGATATGCGTGGCGGCAATGGAACGAAGACAATGCTGCGGAGCTGATCGATCCAGTGATAAGAGCATCGTGCTCAGTTCGGCAGGTGCTGAGATGCATCCATATTGCGTTGCTGTGCGTGCAAGATCACGCAGATGAGCGACCTGACATCCCCACTGTCATCCTTATGCTGAGCAACGACAGCTCGAGCCTTCCTAATCCGAGGCCGCCTACCCTGATGCTTCGAGGCCGTGAGATCGAATCCAGCAAGTCAAGCGAGAAGGACCGGAGCCACTCCATTGGCACTGTGACAATGACACAGTTGCATGGAAGATGAAGTATAACACGAAAAATATACTGAATTTGTGATATATTTGGttttttttGTTCTCCCTTCCTGATGTTGATAATTTGCCATTTGTCGCGGATTAGTTTCCTCTTTTTCTCCTTTTCATGACGGCGACCGCGAAGTTGTATGAAAATCACATTAGCGTCATACATTAAGTGACAATTAATTTTGCAAAGGTGAAATATTTACC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.359 | translated coding region predicted by ESTScan from UniGene Zm.359 | HGLLSSAPLPAPRRRLAMLCGGAEDGHAAAGGVAVRGGDAGVLAGGGVRGGLLPPDPKQPSRQYLGIWYHSISPRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWHPTDTILSGMRITLQAPGRGPKERMLFTSWASETDPSPGRYALGLDPGNSGQAYIWKDGNVTYWRSGQWNGVNFIGIPWRPLYRSGFTPAIDPVLGNYYTYTATNTSLQRFVVLPNGTDICYMVRKSSQDWELVWYQPSNECEYYATCGPNAKCTASQDGKAKCTCLKGFHPKLQEQWNAGNWSQGCIRSPPLGCETNQSGDGFLPMGNIKWPDFSYWVSTVGDEPGCRTVCLNNCSCGAYVYTATTGCLAWGNELIDMHELQTGAYTLNLKLPASELRGHHPIWKIATIISAIVLFVLAACLLLWWKHGRNIKDAVHGSWRSRHSSTQSQQNSAMLDISQSIRFDDDVEDGKSHELKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSLPNPRPPTLMLRGREIESSKSSEKDRSHSIGTVTMTQLHGR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 21-52 | seg | GGAEDGHAAAGGVAVRGGDAGVLAGGGVRGGL |
| ProfileScan: PS50927 IPR001480
|
26-159 | BULB_LECTIN Bulb-type lectin domain
|
GHAAAGGVAVRGGDAGVLAGGGVRGGLLPPDPKQPSRQYLGIWYHSISPRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWH |
| HMMSmart: SM00108 IPR001480
|
33-160 | Bulb-type mannose-specific lectin Bulb-type lectin domain
|
VAVRGGDAGVLAGGGVRGGLLPPDPKQPSRQYLGIWYHSISPRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWHP |
| HMMPanther: PTHR24420:SF755 | 55-817 | OS07G0551300 PROTEIN | PDPKQPSRQYLGIWYHSISPRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWHPTDTILSGMRITLQAPGRGPKERMLFTSWASETDPSPGRYALGLDPGNSGQAYIWKDGNVTYWRSGQWNGVNFIGIPWRPLYRSGFTPAIDPVLGNYYTYTATNTSLQRFVVLPNGTDICYMVRKSSQDWELVWYQPSNECEYYATCGPNAKCTASQDGKAKCTCLKGFHPKLQEQWNAGNWSQGCIRSPPLGCETNQSGDGFLPMGNIKWPDFSYWVSTVGDEPGCRTVCLNNCSCGAYVYTATTGCLAWGNELIDMHELQTGAYTLNLKLPASELRGHHPIWKIATIISAIVLFVLAACLLLWWKHGRNIKDAVHGSWRSRHSSTQSQQNSAMLDISQSIRFDDDVEDGKSHELKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSLPNPRPPTLM |
| HMMPanther: PTHR24420 | 55-817 | FAMILY NOT NAMED,FAMILY NOT NAMED | PDPKQPSRQYLGIWYHSISPRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWHPTDTILSGMRITLQAPGRGPKERMLFTSWASETDPSPGRYALGLDPGNSGQAYIWKDGNVTYWRSGQWNGVNFIGIPWRPLYRSGFTPAIDPVLGNYYTYTATNTSLQRFVVLPNGTDICYMVRKSSQDWELVWYQPSNECEYYATCGPNAKCTASQDGKAKCTCLKGFHPKLQEQWNAGNWSQGCIRSPPLGCETNQSGDGFLPMGNIKWPDFSYWVSTVGDEPGCRTVCLNNCSCGAYVYTATTGCLAWGNELIDMHELQTGAYTLNLKLPASELRGHHPIWKIATIISAIVLFVLAACLLLWWKHGRNIKDAVHGSWRSRHSSTQSQQNSAMLDISQSIRFDDDVEDGKSHELKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSLPNPRPPTLM |
| superfamily: SSF51110 IPR001480
|
62-228 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
RQYLGIWYHSISPRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWHPTDTILSGMRITLQAPGRGPKERMLFTSWASETDPSPGRYALGLDPGNSGQAYIWKDGNVTYWRSGQWN |
| HMMPfam: PF01453 IPR001480
|
74-195 | B_lectin Bulb-type lectin domain
|
PRTVVWVANRVAPATSASPSLTLTVTGDLRVLDGTAANGTADAPLLWSSNTTSRAGPRGGYSAVLQDTGSLEVRSEDGVLWDSFWHPTDTILSGMRITLQAPGRGPKERMLFTSWASETDPS |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
196-233 | no description Bulb-type lectin domain
|
PGRYALGLDPGNSGQAYIWKDGNVTYWRSGQWNGVNFI |
| HMMPfam: PF00954 IPR000858
|
222-331 | S_locus_glycop S-locus glycoprotein
|
WRSGQWNGVNFIGIPWRPLYRSGFTPAIDPVLGNYYTYTATNTSLQRFVVLPNGTDICYMVRKSSQDWELVWYQPSNECEYYATCGPNAKCTASQDGKAKCTCLKGFHPK |
| ProfileScan: PS50026 IPR000742
|
296-334 | EGF_3 Epidermal growth factor-like, type 3
|
PSNECEYYATCGPNAKCTASQDGKAKCTCLKGFHPKLQE |
| HMMPfam: PF08276 IPR013227
|
353-417 | PAN_2 PAN-2 domain
|
CETNQSGDGFLPMGNIKWPDFSYWVSTVGDEPGCRTVCLNNCSCGAYVYTATTGCLAWGNELIDM |
| ProfileScan: PS50948 IPR003609
|
353-433 | PAN Apple-like
|
CETNQSGDGFLPMGNIKWPDFSYWVSTVGDEPGCRTVCLNNCSCGAYVYTATTGCLAWGNELIDMHELQTGAYTLNLKLPA |
| HMMSmart: SM00473 IPR003609
|
357-431 | divergent subfamily of APPLE domains Apple-like
|
QSGDGFLPMGNIKWPDFSYWVSTVGDEPGCRTVCLNNCSCGAYVYTATTGCLAWGNELIDMHELQTGAYTLNLKL |
| superfamily: SSF56112 IPR011009
|
502-824 | Protein kinase-like (PK-like) Protein kinase-like domain
|
RFDDDVEDGKSHELKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSLPNPRPPTLMLRGREIE |
| Gene3D: G3DSA:3.30.200.20 | 512-592 | no description | SHELKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGC |
| ProfileScan: PS50011 IPR000719
|
530-781 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIAL |
| HMMSmart: SM00219 IPR020635
|
530-801 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILML |
| HMMSmart: SM00220 IPR002290
|
530-808 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSL |
| HMMPfam: PF07714 IPR001245
|
533-798 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
SNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRCIHIALLCVQDHADERPDIPTVI |
| Gene3D: G3DSA:1.10.510.10 | 593-735 | no description | CIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFH |
| PatternScan: PS00108 IPR008271
|
651-663 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VVHRDLKASNILL |
| Seg: seg | 821-837 | seg | REIESSKSSEKDRSHSI |
List of Contributions
There has not been any contribution yet.
