PRGDB00063909 (Zm.2239)
| Zm.2239 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 195604731 (EU952078) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Zea mays |
DNA Sequence
ATCTGACTTCGGGAGCGGCTCCTCCGCGTTGCCTGGATCGCCCGGGATCAGTATTTTGCTTCCAGTCAGAGGTCCAAAATATCAAAGGGATGCAGAAAGATGTGGTTGCATGATGGAGTACCTTGCCTGGAAATTGGCAGGATACACAAACATAGTTGTACTTTACTTGATCTCGATGACATTGGACTGCAAATATATGCACAACAATTGCCTCATGCACACACACATAATGGGGCCGCGAGTTGTAGCTCAACCATCGTCTCTGGTTTCTTTCTAGGTGGAGATGGTTAAAATTGCTGGTCACTTATAATTACCAGCATCTTATACGTCATTGTTGTTCATCGCCAACTTATTCAAGTTTGAAAGTAGAACACTGAGAAGATGGCTGAGAAAGAGAATATTCTAATGCAGAGATATGAGATGGGAAAGTTACTTGGAAAAGGGAGTTTTGCCAAAGTTTACCATGCTCGCAATGTTAAGACTTCAGAAAGCGTTGCTATCAAGGTGATTGACAAAGATAAGATCAAGAAGTGTGGTCTTATGGATCAAATAATTCAAGAGATTTCGGTGATGAAGTTGGTAAAACATCCAAACATTGTCCAATTGTATGAGGTTATGGCTACCAAAACCAAGATATATTTTGTGATAGAGTATGTCAAGGGAGGAGAGTTGTTCAAAAAGGTTCAACGTGGAAGGTTAAAAGAAGATGTTGCTCGTACATATTTCCAACAATTGATCAGTGCTGTTGACTTCTGCCATACTAGACAAGTTTATCATAGAGATCTAAAGCCCGAAAATCTTCTTCTTGACGGAAGTCACAACTTAAAGATTTCAGACTTTGGTTTGAGTGCACTTCCAAACTGCAAGAGAAAAGATGGGTTACTCCACACAATTTGTGGGACTCCTGCATATGTTGCTCCAGAAGTAATTAGTCAAAAAGGATATGATGGTGCAAAAGCTGACATATGGGCTTGTGGAGTGATCCTCTATGTGTTGTTGGCGGGCTATCTTCCTTTCCAAGACAAGAACATGATGGACATGTATAAGAAAATTTGCAAAGCAGAACTCAAATGGCCAAGTTGGTTTTCTTCAGATGTTCGAAAGCTTCTGCGGCGCATCCTTCATCCAAACCCTAATAGACGAATATCTATTGAAGAAATAAGGACTCATCCTTGGTTTAGAATTGGTCTTGATGCAAGATTGTTTGATTCTACAACGAGAGATTATGTGCCTAGTGACATGGATTTGGCTTTGAATTCCTTAAATAGCAATATGGTCGAGTGTAATTCAGCGGCAGAGAAACTGACTATTTTGAATGCTTTTGATATCATCTCCCTGTCTAACGGGTTTGATCTCTCTGGTATATTTGAGAACTCAAACAAGGAGTCTAAATTTATGTCTACCAACACAGCTATGACAATTATCACAAAGCTAATGGAGGTTGCAAAGAGCCTGGATCTGAAGGTTATAACAAAAACTGGTGGATTGTTGAATATGGAAGCTGCCAAATCAGGAATAAAAGGTGTGATGTCTATAAATGCTGAGATATTTCAAATCACACCAAATTATCATCTCGTGGAGATCAAGAAAATCAATGGTGACATCCTTGAGTATCATAACTTTATGAACCAAAGCATGAGACCGGCACTAGAAGATATTGTGTGGGCATGGCATGGTGAACAACCTGACGAGAAGTAGACTCATCAACTTTAGATAATCATCAACCTACAACCTTAGATATTGTGGCAGCTTTAATGCTATTAGAAAGTGTATCAGGCATTCAGGCCAAAAAAATGTCATGGGACTTAATAATATTaaaaaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.2239 | translated coding region predicted by ESTScan from UniGene Zm.2239 | MAEKENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKVITKTGGLLNMEAAKSGIKGVMSINAEIFQITPNYHLVEIKKINGDILEYHNFMNQSMRPALEDIVWAWHGEQPDEK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24343 | 1-428 | PTHR24343,SERINE/THREONINE KINASE | MAEKENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKVITKTGGLLNMEAAKSGIKGVMSINAEIFQITPNYHLVEIKKINGDILEYHNFMNQSMRPALEDIVW |
| HMMPanther: PTHR24343:SF45 | 1-428 | PTHR24343:SF45,SERINE/THREONINE-PROTEIN KINASE PTK1 | MAEKENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKVITKTGGLLNMEAAKSGIKGVMSINAEIFQITPNYHLVEIKKINGDILEYHNFMNQSMRPALEDIVW |
| Gene3D: G3DSA:3.30.200.20 | 5-108 | G3DSA:3.30.200.20 | ENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKE |
| superfamily: SSF56112 IPR011009
|
7-326 | Kinase_like Protein kinase-like domain
|
ILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLS |
| HMMPfam: PF00069 IPR017442
|
12-266 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
YEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWF |
| ProfileScan: PS50011 IPR000719
|
12-266 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWF |
| HMMSmart: SM00220 IPR002290
|
12-266 | S_TKc Serine/threonine-protein kinase domain
|
YEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWF |
| PatternScan: PS00107 IPR017441
|
18-41 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGKGSFAKVYHARNVKTSESVAIK |
| Gene3D: G3DSA:1.10.510.10 | 109-275 | G3DSA:1.10.510.10 | DVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLF |
| PatternScan: PS00108 IPR008271
|
130-142 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VYHRDLKPENLLL |
| ProfileScan: PS50816 IPR018451
|
306-330 | NAF NAF/FISL domain
|
EKLTILNAFDIISLSNGFDLSGIFE |
| HMMPfam: PF03822 IPR004041
|
308-362 | NAF NAF domain
|
LTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKV |
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