PRGDB00063951 (Zm.8240)
| Zm.8240 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 223943798 (BT061286) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Zea mays |
DNA Sequence
CGGCAAGGCGCCAAGGCGACCGGACAGGCCTAGGCGAAGCGGGCGCAGCTCCTGCCGGTGGTGGGTAGTGGCCCTAGCAATAAACATCTTGCCCAACCGGCTCTCGCTACGCGCCTACGCTTCGTCAACACCGGAACCGCCCCCACCCCGCCCCGAGCGCCAATTGCACCGCCGCTCCCGGCCAAACCGGCCAAGTCAACGGCGCATCCACTTCTCCTTACCATCCCGGAGGTAATCTTGCGCCGATTCGGTGCCGATTTGCGCCATCCGCGACCGGAGGCTCCGCCGGGTCTTGTGTTCTTGCGGGGCGGGGGCTCAGGACAACCTGGCCTCTGCTTGATTGGATTCGGGGCGTTCGGCGCCTCCAGCTCGCGATCTTTCCTGCCGGTTTCGTCGACCGCTGGTCAACCTGGCCGGTCGGTCCCGGGGGCTCTTCACCTCCGTGCTGCCTGCCACCGTCGCTTTAGTCAAGTCTCGGCCAAGATTTTAGCTATCTCCGGTCAAAAGGCTTTACCGATTCTTGGATTGGTGGCTTCTTGGGGGCGAGAAGCCGGTTCCTGTTTCGTCTCTTGTGCTCCAGCATGTTCTGTAGCACACCGGTTCCCCATCTCCAGTGAAGGTGTTCGTGTGCTCTTGGTTTTGTGCCTCCCGGAATCGTTCCCGGAAAGCTACTTTTGGCCGCTGCGGCGATGGCGTCGAGCACCAGCGAGATGGCCGAGGGGAAGGAGAAGCTGAAGAGGTCCGGCAGCTTGGGAAGCAACGATACGTATGTGCGTGCAGACAAGATTGATCTTACGAGCCTCGACATCCAGCTGGAGAACCAGCTCACCAAGACCTGGGGCAAAGCCAATCTCAAATCCCAGGGGCCAAAGGAGGAGTGGGAGATCGACCTTGCAAAGCTGGAGATCCGCTATGTCATCGCTCAGGGGACGTATGGCACGGTCTACCGGGGCACCTACGATGGACAGGACGTCGCAGTGAAGCTTTTGGATTGGGGAGAAGATGGTTTTGCCACAGAGGCTGAAACTGCTGCTTTACGAACATCATTTAAGACGGAGGTTGCTGTTTGGCATAAGCTCAGCCACCCTAATGTTACAAAGTTTGTTGGTGCATCTATGGGGACCACAGACCTTAAGATTCCATCAAACAATTCCAATGGTGCTGCACGTACAAATTTGCCAGCAAGAGCATGTTGTGTTGTGGTAGAGTATCTTGCTGGAGGAACTTTGAAGCAATATTTGATAAAGAATAGCCGACGGAAGCTTGCTTATAAAGTTGTGGTCCAGCTTGCATTGGATTTGGCCAGAGGATTGAGCTATCTGCACTCCAGAAAGATTGTACATCGGGATGTGAAAAGCGAAAACATGCTGCTTACTCCACAGAGAAACCTTAAGATTGCCGATTTCGGTGTTGCTCGTGTTGAGGCTCAGAATCCAAAGGACATGACTGGTGCAACAGGCACACTTGGTTATATGGCTCCAGAGGTTCTTGATGGTAAGCCATACAACAGGAAGTGTGATGTTTATAGTTTTGGCATTTGTTTATGGGAAATCTATTGCTGTGACATGCCTTACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCCGTTGTTCACCAGAATTTGCGCCCAGACATTCCTCGCTGCTGCCCAAGCGCATTTGCGAATGTTATGCGGAAATGCTGGGATGCAAACCCTGATAAACGCCCTGATATGGATGAAGTGGTGCAGCTTTTAGAGGCTCTGGACACGAGCAAAGGCGGTGGCATGATACCTGATGGCCAATCATCAGGATGCTTATGCTTCACAAAGGCTCGTGGTCCATAGATACTTTTCATGGTACTCCCTTCCCTTGGCAACACTTTCCCCGTGTAAATGACTGGGCCACAGCATGCTTCTCTTTGCACGACCTGTGCAGTCGTCGCTTACAGTTCTCCATAGCTGCCTTGCGATCATTGCGTGTCAACCTGTAGCTCTCATACGATTTTTGCTGTCCTCTGTCGACAATCTTTTCATATACTAGTGTGCTGCTGTAATTGTGGTTCTAAAAGAGATTTGGCATACGCGTTACACTCTTGAAACTGCTGTATGATCAGTATAAATCTTTACTCTGATTATTATTTCCATTTGTGCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.8240 | translated coding region predicted by ESTScan from UniGene Zm.8240 | RQGAKATGQAXAKRAQLLPVVGSGPSNKHLAQPALATRLRFVNTGTAPTPPRAPIAPPLPAKPAKSTAHPLLLTIPEVILRRFGADLRHPRPEAPPGLVFLRGGGSGQPGLCLIGFGAFGASSSRSFLPVSSTAGQPGRSVPGALHLRAACHRRFSQVSAKILAISGQKALPILGLVASWGREAGSCFVSCAPACSVAHRFPISSEGVRXALGFVPPGIVPGKLLLAAAAMASSTSEMAEGKEKLKRSGSLGSNDTYVRADKIDLTSLDIQLENQLTKTWGKANLKSQGPKEEWEIDLAKLEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLLEALDTSKGGGMIPDGQSSGCLCFTKARGPXILFMVLPSLGNTFPV |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 1-15 | seg | RQGAKATGQAXAKRA |
| Seg: seg | 47-64 | seg | APTPPRAPIAPPLPAKPA |
| Seg: seg | 115-127 | seg | GFGAFGASSSRSF |
| Seg: seg | 224-240 | seg | LLLAAAAMASSTSEMAE |
| HMMPanther: PTHR23257 | 268-614 | FAMILY NOT NAMED,Ser-thr,SERINE-THREONINE PROTEIN KINASE | LDIQLENQLTKTWGKANLKSQGPKEEWEIDLAKLEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLLEALDTSKGGGMIPDGQSSGCLCFTKARGPXILFMV |
| HMMPanther: PTHR23257:SF276 | 268-614 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | LDIQLENQLTKTWGKANLKSQGPKEEWEIDLAKLEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLLEALDTSKGGGMIPDGQSSGCLCFTKARGPXILFMV |
| Gene3D: G3DSA:3.30.200.20 | 278-376 | no description | KTWGKANLKSQGPKEEWEIDLAKLEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTT |
| superfamily: SSF56112 IPR011009
|
287-577 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SQGPKEEWEIDLAKLEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQ |
| ProfileScan: PS50011 IPR000719
|
301-582 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
LEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLLEAL |
| HMMSmart: SM00220 IPR002290
|
301-582 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
LEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLLEAL |
| HMMSmart: SM00219 IPR020635
|
301-579 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
LEIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLL |
| HMMPfam: PF07714 IPR001245
|
302-579 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
EIRYVIAQGTYGTVYRGTYDGQDVAVKLLDWGEDGFATEAETAALRTSFKTEVAVWHKLSHPNVTKFVGASMGTTDLKIPSNNSNGAARTNLPARACCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLL |
| Gene3D: G3DSA:1.10.510.10 | 398-581 | no description | CCVVVEYLAGGTLKQYLIKNSRRKLAYKVVVQLALDLARGLSYLHSRKIVHRDVKSENMLLTPQRNLKIADFGVARVEAQNPKDMTGATGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVHQNLRPDIPRCCPSAFANVMRKCWDANPDKRPDMDEVVQLLEA |
| FPrintScan: PR00109 IPR001245
|
402-415 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
VEYLAGGTLKQYLI |
| FPrintScan: PR00109 IPR001245
|
440-458 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
YLHSRKIVHRDVKSENMLL |
| PatternScan: PS00108 IPR008271
|
446-458 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IVHRDVKSENMLL |
| FPrintScan: PR00109 IPR001245
|
506-528 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
CDVYSFGICLWEIYCCDMPYPDL |
| FPrintScan: PR00109 IPR001245
|
550-572 | TYRKINASE Serine-threonine/tyrosine-protein kinase
|
CPSAFANVMRKCWDANPDKRPDM |
List of Contributions
There has not been any contribution yet.
