PRGDB00064024 (Zm.20043)
| Zm.20043 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 223949088 (BT063931) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Zea mays |
DNA Sequence
CCACTCTTGGCGAAGCGAAATCCACCGTACACCGCTGCCTCCCTCTCCCTGTCTCGTCTCGTCGAACCAGCCGAGGAAGCCAACGCAGACCCAGCGATCCTCGTCGCGCGCCCTCCTCCCCCACGGAGGGAAGGATGGCGGAGCCCAAAGCGGCGGCGGCGGCGAGGAAGACGCGGGTGGGCCCGTACGAGGTCGGCAAGACCATCGGCGAGGGCAGCTTCGCCAAGGTCAAGCACGCGCGCGACTCCCGCACCGGCGCCGTCCGCGCCATCAAGGTGCTCGACCGCAACCACGTCCTCCGCCACAGGATGGTCGAGCAGATCAAGCGGGAGATTTCGACTATGAAGCTGATCAAACATCCCAATGTGGTACAGCTGCATGAGGTTATGGCGAGCAAAACGAAGATATACATGGTTCTTGAATTTGTTGATGGAGGCGAGCTATTCGATAAGATCGTCAATTCTGGAAGGCTAGGAGAGGATGAAGCTAGGATATACTTTCATCAACTTATAAATGCAGTTGATTATTGCCATAGCCGAGGAGTGTACCATAGAGACCTGAAGCCAGAGAATTTGCTTCTGGATTCAAATGGAGCTCTTAAAGTTTCAGACTTCGGCCTAAGTGCATTTGCACCACAAACAAATGAGGATGGGCTTCTGCATACTACCTGTGGAACTCCAAACTATGTAGCACCTGAGGTGCTTGCTGATAAAGGTTATGATGGTATGGCTGCAGATGTATGGTCCTGTGGCATAATCTTATTTGTTCTTATGGCTGGATACTTACCCTTTGATGATGCCAATCTGATGAGACTGTACAAACTGATCTGCCAAGCATATTTTTCTTGCCCACCATGGTTTTCTTCTGGAGCGAAGAAGTTTATTAAGCGCATTCTCGATCCTAATCCTGATACGAGGATAACAATTGCAGAAATTTTGGAAGATGAATGGTTCAAAAAAGATTATAAACCACCACGTTTTGAACAAGGTGAAGATGTTAGCCTTGACGACATTGATGCTGCATTCAATGATTCAGAGGACCGTCTTGTGGCAGAGAAAAGAGAGAAACCGGAATCCATGAACGCGTTTGCTCTTATTTCGAGGTCGCAGGGTTTCAACCTTGGAAATTTGTTTGAGAAGGAGATGATGGGAATGGTAAAGAGGGAAACATCTTTCACGTCTCAATGCACAGCACAGGAGATCATGACAAAAATAGAGGATGCATGTGGGCCACTCGGTTTCAACGTGCGGAAACAAAATTACAAGATGAAATTGAAAGGTGACAAATCTGGAAGAAAAGGTCACTTATCTGTTGCAACTGAGGTTTTTGAGGTTGCCCCATCACTTCACATGGTTGAGCTTCGTAAAACCGGAGGAGACACATTGGAGTTCCACAGCTTCTACAAGAACTTCTCATCGGAGCTGAAAGATATCGTGTGGAAAGCTGAATCTGACGCAAATAATAAACAGACGAATAAGTGATACCCAGAGAATCTGTGTAGCCCTCATGAGGCCACATTCAGATAGATCACCTCTTCGGGTGATACCACCTGCTTGGTACTGTATGCttttttttttACTGGTACCACATTAGCAGCCAAAATCTCTTGTAAACGGGAACTCCTTCTGAATGAGCGCAATTGTACAAAACACATATGAAGAGGCCCTCCGTGAGATGCTCCGAACACTGCAATGGGATGTCAAATAGTTCTG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.20043 | translated coding region predicted by ESTScan from UniGene Zm.20043 | XTLGEAKSTVHRCLPLPVSSRRTSRGSQRRPSDPRRAPSSPTEGRMAEPKAAAAARKTRVGPYEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWFKKDYKPPRFEQGEDVSLDDIDAAFNDSEDRLVAEKREKPESMNAFALISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTAQEIMTKIEDACGPLGFNVRKQNYKMKLKGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHSFYKNFSSELKDIVWKAESDANNKQTNK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 19-41 | seg | SSRRTSRGSQRRPSDPRRAPSSP |
| superfamily: SSF56112 IPR011009
|
49-346 | Protein kinase-like (PK-like) Protein kinase-like domain
|
PKAAAAARKTRVGPYEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWFKKDYKPPRFEQGEDVSLDDIDAAFNDSE |
| Seg: seg | 51-55 | seg | AAAAA |
| Gene3D: G3DSA:3.30.200.20 | 55-170 | no description | ARKTRVGPYEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQL |
| HMMPanther: PTHR24345:SF45 | 57-489 | SUBFAMILY NOT NAMED,SERINE/THREONINE-PROTEIN KINASE PLK1 | KTRVGPYEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWFKKDYKPPRFEQGEDVSLDDIDAAFNDSEDRLVAEKREKPESMNAFALISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTAQEIMTKIEDACGPLGFNVRKQNYKMKLKGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHSFYKNFSSELKDIVWKAESDANNK |
| HMMPanther: PTHR24345 | 57-489 | FAMILY NOT NAMED,SERINE/THREONINE-PROTEIN KINASE PLK | KTRVGPYEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWFKKDYKPPRFEQGEDVSLDDIDAAFNDSEDRLVAEKREKPESMNAFALISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTAQEIMTKIEDACGPLGFNVRKQNYKMKLKGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHSFYKNFSSELKDIVWKAESDANNK |
| HMMPfam: PF00069 IPR017442
|
63-318 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
YEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWF |
| ProfileScan: PS50011 IPR000719
|
63-318 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWF |
| HMMSmart: SM00220 IPR002290
|
63-318 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWF |
| HMMSmart: SM00219 IPR020635
|
63-317 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YEVGKTIGEGSFAKVKHARDSRTGAVRAIKVLDRNHVLRHRMVEQIKREISTMKLIKHPNVVQLHEVMASKTKIYMVLEFVDGGELFDKIVNSGRLGEDEARIYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEW |
| PatternScan: PS00107 IPR017441
|
69-92 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGEGSFAKVKHARDSRTGAVRAIK |
| Gene3D: G3DSA:1.10.510.10 | 171-325 | no description | INAVDYCHSRGVYHRDLKPENLLLDSNGALKVSDFGLSAFAPQTNEDGLLHTTCGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDANLMRLYKLICQAYFSCPPWFSSGAKKFIKRILDPNPDTRITIAEILEDEWFKKDYKPP |
| PatternScan: PS00108 IPR008271
|
182-194 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VYHRDLKPENLLL |
| ProfileScan: PS50816 IPR018451
|
355-379 | NAF NAF/FISL domain
|
EKPESMNAFALISRSQGFNLGNLFE |
| HMMPfam: PF03822 IPR004041
|
356-418 | NAF NAF domain
|
KPESMNAFALISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTAQEIMTKIEDACGPLGFNVRK |
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