PRGDB00064341 (Zm.85988)
| Zm.85988 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 194707009 (BT042584) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Zea mays |
DNA Sequence
TGGTTTCCGTTCCCAATCCCCTTCTTCCCCGACTCGCCCGGCGCTGAATAAGATTCCCCTGTATTCTGTTCCAGAGATGAGCTGATCGAGCAGCCCGTCGCCAAGCCAACCGGACATGGTGAGCGACGGCGCGCGCGGGCTGCTGGGCGCGTACGAGCTCGGGCGGACGCTCGGGGAGGGCAACTTCGGGAAGGTGAAGCAGGCGCGGCACCGCGGCAGCGGCGGGCAGTTTGCCGTGAAGATCATGGAGCGCGCCAGGGTGCTGTCGCAGCGCGCGGACGAGCAGATATGCCGCGAGATCGCCACGCTCAAGCTGCTCGCGCACCCCAACGTCGTCCGCCTCCACGAGGTGGCTGCCAGCAAGACGAAGATCTACATGGTGCTTGAGCTCGTCAACGGCGGCGAGCTGCTGGACAGGATTGCGGCCAGTGAGGGAAAGCTCCCGGAGCAGGAGGCAAGGAGGCTCTTCCAGCAGCTGGTTGATGGTGTAAGCTACTGCCATGAAAAGGGCGTCTGTCACAGAGACCTCAAGCTGGAGAACGTTCTTGTCGACCGGAAGGGAAACATCAAGATCTCTGATTTCGGGCTCAGCGCTTTACCGCAACATCTCGGGAACGATGGGTTGCTGCACACGACCTGCGGTAGCCCCAACTACATTGCCCCTGAGGTTCTGCAGAACAGAGGGTACGACGGGTCGCTATCGGACATCTGGTCATGCGGGGTGATTCTCTACGTGATGCTCGTAGGGCACCTCCCGTTCGACGACCGGAACATCGTCGTTCTCTACCAGAAGATTTTCAAGGGCGATGCTCAGATCCCGGAGTGGCTCTCTCCCGGCGCACGGAACCTTCTCCGGAGGATCCTTGAGCCCGACCCGGCGGAGCGGATCGCCATGGCAGAGATCAAGGCGCACCCATGGTTCCAGGAGCACTACGTCCCTGTCCTTCCTCCGTacgacgacgacgacgaccacgaTTCAGTGAAGCAAATCGGTGCGGGTAGTAAAACCACTCATCACATCAACGCGTTTCAGTTGATCGGAATGGCGTCGTCCCTAGACCTCTCAGGGTTTTTTGAGGAAGAGGACGTGTCCCAAAGGAAGATCAGGTTCACGTCCGCACAACCGCCTGAGGATTTGTTCGCCGAGATCGAACGCTCTGCGACTGACATGGGCTTCCATGTTCACAGAGGGCATAGTAAGCTTAGGCTGACGCGAAACTGCGACCGGTCGAAGAATTAGAAGAACCCTATgtcgtcgtcgtcgtcgtcgtTTCTAGTCTGCACCGAGGTTTTTGAGCTTAGCCCCTCTTTGTATGTCGTGGAGCTCAACAAGTCCCATGGCGACCCTGCACTGTACAGGCAGCTCTGTCAGAGGATCTGCGGTGACCTAGGTGTGCTCGAGATGGACCAGATCTTTGGGACGAGGCCGCCGGTCGCCGACGATCTCGCGGGCTTGGCCTTGGCGTTGGAGAGACGATCTGCGACGCCTTTGGTTGCGTTGTGACGAAAGGCTGCCCCCGCCGGCCCCCCTGACCGTGATGTTTGTAGCGTCAGATTATTTAGTGACGACGAAGCAGTTCAGCTGCAACGCAGCTCGGAACGGTTGTGTGATCCCTCCCAGAAATAGAGGACAAGGTAAAAGAGTGTAGCCGTACACGTGTAGGATCATGCTCCAATGTAAATAAAGTGGTAGTAGCCACCGATGTAAAACTGAATGTAAAATCTAAGAAATAAATCGTTTATCCAGT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.85988 | translated coding region predicted by ESTScan from UniGene Zm.85988 | XGFRSQSPSSPTRPALNKIPLYSVPEMSXSSSPSPSQPDMVSDGARGLLGAYELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWFQEHYVPVLPPYDDDDDHDSVKQIGAGSKTTHHINAFQLIGMASSLDLSGFFEEEDVSQRKIRFTSAQPPEDLFAEIERSATDMGFHVHRGHSKLRLTRNCDRSKNXKNPMSSSSSSFLVCTEVFELSPSLYVVELNKSHGDPALYRQLCQRICGDLGVLEMDQIFGTRPPVADDLAGLALALERRSATPLVAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 23-43 | seg | SVPEMSXSSSPSPSQPDMVSD |
| superfamily: SSF56112 IPR011009
|
38-339 | Protein kinase-like (PK-like) Protein kinase-like domain
|
PDMVSDGARGLLGAYELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWFQEHYVPVLPPYDDDDDHDSVKQIGAGSKTTH |
| HMMPanther: PTHR24343 | 48-326 | FAMILY NOT NAMED,SERINE/THREONINE KINASE | LLGAYELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWFQEHYVPVLPPYDDDDDHD |
| HMMPanther: PTHR24343:SF128 | 48-326 | SUBFAMILY NOT NAMED | LLGAYELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWFQEHYVPVLPPYDDDDDHD |
| Gene3D: G3DSA:3.30.200.20 | 49-160 | no description | LGAYELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQL |
| HMMPfam: PF00069 IPR017442
|
52-308 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
YELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWF |
| ProfileScan: PS50011 IPR000719
|
52-308 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWF |
| HMMSmart: SM00219 IPR020635
|
52-308 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWF |
| HMMSmart: SM00220 IPR002290
|
52-308 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YELGRTLGEGNFGKVKQARHRGSGGQFAVKIMERARVLSQRADEQICREIATLKLLAHPNVVRLHEVAASKTKIYMVLELVNGGELLDRIAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWF |
| PatternScan: PS00107 IPR017441
|
58-81 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGEGNFGKVKQARHRGSGGQFAVK |
| Gene3D: G3DSA:1.10.510.10 | 161-311 | no description | VDGVSYCHEKGVCHRDLKLENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWFQEH |
| PatternScan: PS00108 IPR008271
|
172-184 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VCHRDLKLENVLV |
| Seg: seg | 320-326 | seg | DDDDDHD |
| ProfileScan: PS50816 IPR018451
|
336-360 | NAF NAF/FISL domain
|
KTTHHINAFQLIGMASSLDLSGFFE |
| HMMPfam: PF03822 IPR004041
|
340-396 | NAF NAF domain
|
HINAFQLIGMASSLDLSGFFEEEDVSQRKIRFTSAQPPEDLFAEIERSATDMGFHVH |
| Seg: seg | 419-424 | seg | SSSSSS |
| Seg: seg | 480-490 | seg | ADDLAGLALAL |
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