PRGDB00064441 (Zm.106182)

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Zm.106182
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 238908701 (BT036344)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Zea mays

Comment?

Zea mays full-length cDNA clone ZM_BFb0108D02 mRNA, complete cds

DNA Sequence

CCTATAAACAAGGGGCCGGGGTCTCTCTCCTACGGCGTGCGCATGCTTTGGCTTGGCAAACCCGATTGGATCTTCAGAGAAATCGCCATCCCCTCTCCCTCTTCTCGTGCCCATCGCTCCTCTACCCATTCTTACTTGAATCTTTTCTGACGAGGAAATCTGACTTCGGGAGCGGCTCCTCCGCGTTGCCTGGATCGCCCGGGATCAGTATTTTGCTTCCAGTCAGAGGTCCAAAATATCAAAGGGATGCAGAAAGATGTGGTTGCATGATGGAGTACCTTGCCTGGAAATTGGCAGGATACACAAACATAGTTGTACTTTACTTGATCTCGATGACATTGGACTGCAAATATATGCACAACAATTGCCTCATGCACACACACATAATGGGGCCGCGAGTTGTAGCTCAACCATCGTCTCTGGTTTCTTTCTAGGTGGAGATGGTTAAAATTGCTGGTCACTTATAATTACCAGCATCTTATACGTCATTGTTGTTCATCGCCAACTTATTCAAGTTTGAAAGTAGAACACTGAGAAGATGGCTGAGAAAGAGAATATTCTAATGCAGAGATATGAGATGGGAAAGTTACTTGGAAAAGGGAGTTTTGCCAAAGTTTACCATGCTCGCAATGTTAAGACTTCAGAAAGCGTTGCTATCAAGGTGATTGACAAAGATAAGATCAAGAAGTGTGGTCTTATGGATCAAATAATTCAAGAGATTTCGGTGATGAAGTTGGTAAAACATCCAAACATTGTCCAATTGTATGAGGTTATGGCTACCAAAACCAAGATATATTTTGTGATAGAGTATGTCAAGGGAGGAGAGTTGTTCAAAAAGGTTCAACGTGGAAGGTTAAAAGAAGATGTTGCTCGTACATATTTCCAACAATTGATCAGTGCTGTTGACTTCTGCCATACTAGACAAGTTTATCATAGAGATCTAAAGCCCGAAAATCTTCTTCTTGACGGAAGTCACAACTTAAAGATTTCAGACTTTGGTTTGAGTGCACTTCCAAACTGCAAGAGAAAAGATGGGTTACTCCACACAATTTGTGGGACTCCTGCATATGTTGCTCCAGAAGTAATTAGTCAAAAAGGATATGATGGTGCAAAAGCTGACATATGGGCTTGTGGAGTGATCCTCTATGTGTTGTTGGCGGGCTATCTTCCTTTCCAAGACAAGAACATGATGGACATGTATAAGAAAATTTGCAAAGCAGAACTCAAATGGCCAAGTTGGTTTTCTTCAGATGTTCGAAAGCTTCTGCGGCGCATCCTTCATCCAAACCCTAATAGACGAATATCTATTGAAGAAATAAGGACTCATCCTTGGTTTAGAATTGGTCTTGATGCAAGATTGTTTGATTCTACAACGAGAGATTATGTGCCTAGTGACATGGATTTGGCTTTGAATTCCTTAAATAGCAATATGGTCGAGTGTAATTCAGCGGCAGAGAAACTGACTATTTTGAATGCTTTTGATATCATCTCCCTGTCTAACGGGTTTGATCTCTCTGGTATATTTGAGAACTCAAACAAGGAGTCTAAATTTATGTCTACCAACACAGCTATGACAATTATCACAAAGCTAATGGAAGTTGCAAAGAGCCTGGATCTGAAGGTTATAACAAAAACTGGTGGATTGTTGAATATGGAAGCTGCCAAATCAGGAATAAAAGGTGTGATGTCTATAAATGCTGAGATATTTCAAATCACACCAAATTATCATCTCGTGGAGATCAAGAAAATCAATGGTGACATCCTTGAGTATCATAACTTTATGAACCAAAGCATGAGACCGGCACTAGAAGATATTGTGTGGGCATGGCATGGTGAACAACCTGACGAGAAGTAGACTCATCAACTTTAGATAATCATCAACCTACAACCTTAGATATTGTGGCAGCTTTAATGCTATTAGAAAGTGTATCAGGCATTCAGGCCaaaaaaaaTGTCATGGGACTTAATAATATTACTTATATGTTGTTTTT


Protein sequences

Name Description Sequence
Zm.106182 translated coding region predicted by ESTScan from UniGene Zm.106182

MAEKENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKVITKTGGLLNMEAAKSGIKGVMSINAEIFQITPNYHLVEIKKINGDILEYHNFMNQSMRPALEDIVWAWHGEQPDEK

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24343
1-428 PTHR24343,SERINE/THREONINE KINASE

MAEKENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKVITKTGGLLNMEAAKSGIKGVMSINAEIFQITPNYHLVEIKKINGDILEYHNFMNQSMRPALEDIVW

HMMPanther: PTHR24343:SF45
1-428 PTHR24343:SF45,SERINE/THREONINE-PROTEIN KINASE PTK1

MAEKENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKVITKTGGLLNMEAAKSGIKGVMSINAEIFQITPNYHLVEIKKINGDILEYHNFMNQSMRPALEDIVW

Gene3D: G3DSA:3.30.200.20
5-108 G3DSA:3.30.200.20

ENILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKE

superfamily: SSF56112
IPR011009
7-326 Kinase_like
Protein kinase-like domain

ILMQRYEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLFDSTTRDYVPSDMDLALNSLNSNMVECNSAAEKLTILNAFDIISLSNGFDLS

HMMPfam: PF00069
IPR017442
12-266 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

YEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWF

ProfileScan: PS50011
IPR000719
12-266 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

YEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWF

HMMSmart: SM00220
IPR002290
12-266 S_TKc
Serine/threonine-protein kinase domain

YEMGKLLGKGSFAKVYHARNVKTSESVAIKVIDKDKIKKCGLMDQIIQEISVMKLVKHPNIVQLYEVMATKTKIYFVIEYVKGGELFKKVQRGRLKEDVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWF

PatternScan: PS00107
IPR017441
18-41 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

LGKGSFAKVYHARNVKTSESVAIK

Gene3D: G3DSA:1.10.510.10
109-275 G3DSA:1.10.510.10

DVARTYFQQLISAVDFCHTRQVYHRDLKPENLLLDGSHNLKISDFGLSALPNCKRKDGLLHTICGTPAYVAPEVISQKGYDGAKADIWACGVILYVLLAGYLPFQDKNMMDMYKKICKAELKWPSWFSSDVRKLLRRILHPNPNRRISIEEIRTHPWFRIGLDARLF

PatternScan: PS00108
IPR008271
130-142 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VYHRDLKPENLLL

ProfileScan: PS50816
IPR018451
306-330 NAF
NAF/FISL domain

EKLTILNAFDIISLSNGFDLSGIFE

HMMPfam: PF03822
IPR004041
308-362 NAF
NAF domain

LTILNAFDIISLSNGFDLSGIFENSNKESKFMSTNTAMTIITKLMEVAKSLDLKV






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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