PRGDB00064504 (Zm.126160)
| Zm.126160 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 149098977 (EE184990) |
| Gene Class | RLP |
| Domain Type | Ser-Thr Kinase, LRR, Receptor-Like Kinase |
| Gene Species | Zea mays |
DNA Sequence
CGCGACGCGTCGCCAACTCGCCATGGCGCTCCGTCTTCTGCTCCTCCTCGTCACTGTTACTACCGCCGCCGACGCGCTCACGCCGGACGGGCAGGCGCTGCTGGCGTTCAAGGCGGCCGTTCTCCAAGATCCCACGGGGGCGCTCGCCAACTGGGTCGCCACCGCCGCGGACCCCTGCTCATGGAACGGGGTCACCTGCTCCTCCCCTGACCCCGGCTCCGCGCAGCACCGCCGCGTCGTTGCGCTCTCCCTCCCTAAGAAGCGCCTCGTCGCGGAGCTCCCTAGGGCCCCGCTCCCGTCCTCGCTTCGCCACCTCAACCTCCGCAGCAACCGCCTCTTCGGGCCCATCCCACCCGCGCTCGTCGCTGGCGCACCCGCGCTCCAGAGCCTCGTCCTCTACGGGAACGCGCTCGACGGCCAGCTCCCCGAGGACCTCGGTGACCTGGCCTTCCTCCAGATCCTCGACCTCTCCTCCAACGCCATCAACGGCTCCCTCCCGGCCTCGATCCTCAAATGCCGCAGGCTCCGCGCTCTTGCGCTCGCGCGGAACAATCTCACAGGCTCGCTCCCCGCTGGGTTCGGCGCCCGCCTCGGGGCGCTGGAACGGCTCGACCTCTCCTTCAACGGCTTCTACGGCACCATCCCGGAGGACATCGGGAACCTGTCCAGGCTCCAGGGGACGGTCGACCTCTCGCACAACCACTTCTCGGGCCCCATCCCGGCGAGTCTTGGGAGGCTACCGGAGAAGGTCTACATCGATCTCACCTACAATAACCTCTCCGGTCCGATCCCGCAGAACGGGGCGTTGGAGAACCGGGGACCCACGGCGTTCGTTGGCACCCGGGGCTCTGCGGGCCCCCGCTTAAGACCCCTGCGCGCAGACACCATGCCTTCCTCAATCCTCCCTGCCCATG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Zm.126160 | translated coding region predicted by ESTScan from UniGene Zm.126160 | MALRLLLLLVTVTTAADALTPDGQALLAFKAAVLQDPTGALANWVATAADPCSWNGVTCSSPDPGSAQHRRVVALSLPKKRLVAELPRAPLPSSLRHLNLRSNRLFGPIPPALVAGAPALQSLVLYGNALDGQLPEDLGDLAFLQILDLSSNAINGSLPASILKCRRLRALALARNNLTGSLPAGFGARLGALERLDLSFNGFYGTIPEDIGNLSRLQGTVDLSHNHFSGPIPASLGRLPEKVYIDLTYNNLSGPIPQNGALENRGPTAFVGTRGSAGPRLRPLRADTMPSSILPAHX |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-292 | FAMILY NOT NAMED,FAMILY NOT NAMED | MALRLLLLLVTVTTAADALTPDGQALLAFKAAVLQDPTGALANWVATAADPCSWNGVTCSSPDPGSAQHRRVVALSLPKKRLVAELPRAPLPSSLRHLNLRSNRLFGPIPPALVAGAPALQSLVLYGNALDGQLPEDLGDLAFLQILDLSSNAINGSLPASILKCRRLRALALARNNLTGSLPAGFGARLGALERLDLSFNGFYGTIPEDIGNLSRLQGTVDLSHNHFSGPIPASLGRLPEKVYIDLTYNNLSGPIPQNGALENRGPTAFVGTRGSAGPRLRPLRADTMPSS |
| HMMPanther: PTHR24420:SF896 | 1-292 | SUBFAMILY NOT NAMED | MALRLLLLLVTVTTAADALTPDGQALLAFKAAVLQDPTGALANWVATAADPCSWNGVTCSSPDPGSAQHRRVVALSLPKKRLVAELPRAPLPSSLRHLNLRSNRLFGPIPPALVAGAPALQSLVLYGNALDGQLPEDLGDLAFLQILDLSSNAINGSLPASILKCRRLRALALARNNLTGSLPAGFGARLGALERLDLSFNGFYGTIPEDIGNLSRLQGTVDLSHNHFSGPIPASLGRLPEKVYIDLTYNNLSGPIPQNGALENRGPTAFVGTRGSAGPRLRPLRADTMPSS |
| Seg: seg | 2-20 | seg | ALRLLLLLVTVTTAADALT |
| superfamily: SSF52058 | 16-258 | L domain-like,LRR | ADALTPDGQALLAFKAAVLQDPTGALANWVATAADPCSWNGVTCSSPDPGSAQHRRVVALSLPKKRLVAELPRAPLPSSLRHLNLRSNRLFGPIPPALVAGAPALQSLVLYGNALDGQLPEDLGDLAFLQILDLSSNAINGSLPASILKCRRLRALALARNNLTGSLPAGFGARLGALERLDLSFNGFYGTIPEDIGNLSRLQGTVDLSHNHFSGPIPASLGRLPEKVYIDLTYNNLSGPIPQ |
| HMMPfam: PF08263 IPR013210
|
21-60 | LRRNT_2 Leucine-rich repeat-containing N-terminal domain,
|
PDGQALLAFKAAVLQDPTGALANWVATAADPCSWNGVTCS |
| Gene3D: G3DSA:3.80.10.10 | 22-262 | no description | DGQALLAFKAAVLQDPTGALANWVATAADPCSWNGVTCSSPDPGSAQHRRVVALSLPKKRLVAELPRAPLPSSLRHLNLRSNRLFGPIPPALVAGAPALQSLVLYGNALDGQLPEDLGDLAFLQILDLSSNAINGSLPASILKCRRLRALALARNNLTGSLPAGFGARLGALERLDLSFNGFYGTIPEDIGNLSRLQGTVDLSHNHFSGPIPASLGRLPEKVYIDLTYNNLSGPIPQNGAL |
| Seg: seg | 90-105 | seg | PLPSSLRHLNLRSNRL |
| HMMPfam: PF13855 | 93-154 | LRR_8,Leucine rich repeat | SSLRHLNLRSNRLFGPIPPALVAGAPALQSLVLYGNALDGQLPEDLGDLAFLQILDLSSNAI |
| Seg: seg | 166-178 | seg | RRLRALALARNNL |
| HMMPfam: PF00560 IPR001611
|
193-214 | LRR_1 Leucine-rich repeat
|
LERLDLSFNGFYGTIPEDIGNL |
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