PRGDB00064667 (Aan.938)

Aan.938
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	159628869 (EY033748)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Artemisia annua
	Comment?

CAIX403.fwd CAIX Artemisia annua leaf Artemisia annua cDNA clone CAIX403 5', mRNA sequence

DNA Sequence

GTTCACAAGAACTTAAAAAGTAGCAATGTGTTGTTAGATGCAAACATGAGAGCAAAAATAACAAATTTTGGGCTTGCAAGAAGTGTGGATGAAGAAAAGGATGATGGAGGATTTCAGTTGACCAGGCATGTTGTCGGGACATATGGTTACATGCCTCCAGAATACATAGAAAATGGGTTGATTACACCTAAAATGGACGTGTTTGCTTTAGGTGTGTTGATTGCAGAGCTCCTATCAGGTAAAGAAGCCATCACACGATCAACTGAGAGTGGCGTCGATAAAAAGAACGATAAGGAAGTGCAGCTATCGGAGATTATAAAGGAGGTTCTTGCAGGGGATAATGTGAGGGAGAAGTTGACGTCATTTATGGATAGTAGGTTGAGGGGTGAGTATCCTTTGGAATTGGCTTATTCGATGGCGGAGGTTGCTAGTAAATGTGTGGCCACTGATTTAAATGACCGTCCATCTGTGACTGAGGTGTTTATGAAGATGTTGGAGATCTTGTCGTCTTCTTTAGATTGGGATCCGTCTGATGAACTTGAACACTCGAGATCGCTCAGCACTGGCAGATAAAAAAAGATATTTTCCAAGTATTCTATGGTGTATGTGTGTATCGTATGTCAGAACAGTAATGAATCACAAATATGTTGTAATAGACAGTAGAATTTATTGCGTATGTATTGTTGAATGAACTTTTATACAGAAACAGAGCAGAATATCCAATaaaaaaaaaaaaaaaa

Protein sequences

Name	Description	Sequence
Aan.938	translated coding region predicted by ESTScan from UniGene Aan.938	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEVFMKMLEILSSSLDWDPSDELEHSRSLSTGR

Domains

Domain	Start-End	Description	Sequence
HMMPfam: PF00069 IPR017442	1-161	Pkinase,Ser-thr Serine/threonine-protein kinase-like domain	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEVF
ProfileScan: PS50011 IPR000719	1-168	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEVFMKMLEIL
superfamily: SSF56112 IPR011009	1-160	Protein kinase-like (PK-like) Protein kinase-like domain	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEV
Gene3D: G3DSA:1.10.510.10	1-162	no description	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEVFM
HMMPanther: PTHR24420:SF481	1-179	SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEVFMKMLEILSSSLDWDPSDE
HMMPanther: PTHR24420	1-179	FAMILY NOT NAMED,FAMILY NOT NAMED	VHKNLKSSNVLLDANMRAKITNFGLARSVDEEKDDGGFQLTRHVVGTYGYMPPEYIENGLITPKMDVFALGVLIAELLSGKEAITRSTESGVDKKNDKEVQLSEIIKEVLAGDNVREKLTSFMDSRLRGEYPLELAYSMAEVASKCVATDLNDRPSVTEVFMKMLEILSSSLDWDPSDE

List of Contributions

There has not been any contribution yet.

Add a Contribution

Analyses

Blast

Blast matches against Reference R-Genes. Show