PRGDB00064676 (Aan.1800)

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Aan.1800
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 159520373 (EY042815)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Artemisia annua

Comment?

CAIY641.rev CAIY Artemisia annua leaf Artemisia annua cDNA clone CAIY641 3', mRNA sequence

DNA Sequence

AAAGAAATTACCAAAAACATCCATAATACACGTAACTATATTAGTCTAGAAAGGTAGCAATCTCCATTGATACAAATTATTTTCTTATTTAATAACAATCTACAACATAATTCAGGACAACaaaaaaaacataaaaaGTTTCTTAAACTTTATGACTTATGACTAGACATCATACAAAATCGATCAAGCATTAAGTTACAGATACATGCATCTTCATCCAAACTCGATCATCCACTGACAATAAATCTTTGACTTGGCGCATTGTTGGCCTTTCCTGTGGGTTATAGTTCAAACATGCCCGTGAGACATTCAAAATTGGATGAGCTAGTTTCTCAACTAGAGATGATGGTGGCGGAATCCGACTATCTCCTACATTGGCTAGCAATAGATCATCAGTGGACAATGTTGGTAGAGATGATATAAGTTCTCCAGGATGCTTTCCCATAATCACTTCTAGTGCAACAACTCCAAAACTATACACATCACATTTCTCTGTCGCCACCATCGTATAAGCAAGCTCTGGCGCAATATAGCCATAAGTGCCTACAACCGCAGTCCAGTTGGATGAATCCAGCTTTAGAAGCTTCGCTGTTCCAAAATCCGAGATATGTGCCTCATAATCAGAATCGAGAAGGATATTAGCTCCAGAAATGTCTCTATGAATTATAGGTGGTGTGCAATCATGGTGCATATAAGCCAAAGCATTCACTACAGCCCTAACAATTTTTAACCTTTTCAGCCAATCCATTTCCTTTGCTGTGATATCGCTACTTAAGAGCGATTTT


Protein sequences

Name Description Sequence
Aan.1800 translated coding region predicted by ESTScan from UniGene Aan.1800

XKSLLSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRVWMKMHVSVT

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-191 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

XKSLLSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRVWM

HMMSmart: SM00220
IPR002290
1-191 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

XKSLLSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRVWM

HMMPanther: PTHR24420:SF472
2-191 SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED

KSLLSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRVWM

HMMPanther: PTHR24420
2-191 FAMILY NOT NAMED,FAMILY NOT NAMED

KSLLSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRVWM

HMMSmart: SM00219
IPR020635
2-183 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

KSLLSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLL

superfamily: SSF56112
IPR011009
5-191 Protein kinase-like (PK-like)
Protein kinase-like domain

LSSDITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRVWM

Gene3D: G3DSA:1.10.510.10
9-189 no description

ITAKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVKDLLSVDDRV

HMMPfam: PF00069
IPR017442
11-180 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

AKEMDWLKRLKIVRAVVNALAYMHHDCTPPIIHRDISGANILLDSDYEAHISDFGTAKLLKLDSSNWTAVVGTYGYIAPELAYTMVATEKCDVYSFGVVALEVIMGKHPGELISSLPTLSTDDLLLANVGDSRIPPPSSLVEKLAHPILNVSRACLNYNPQERPTMRQVK

PatternScan: PS00109
IPR008266
41-53 PROTEIN_KINASE_TYR
Tyrosine-protein kinase, active site

IIHRDISGANILL

Seg: seg
122-136 seg

LISSLPTLSTDDLLL






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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