PRGDB00064686 (Aan.3184)
| Aan.3184 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 259555396 (EZ168674) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Artemisia annua |
DNA Sequence
GGTCACTCTtcaatttttacaacaatttaatttaatttaattaattGGTTCTTGATTTAACTATGAATCCCCAAAATATTTCTCTTTAAAATCAGATCTTGATTGATAATTAAGAAAGAAAAAGATGGCAACTTTTGAATTATACAGAAGATCAACAATTGGAATGTGTTTGACAGAGACATTGGATGAGATGGTTTCTAATGGTGTTCTTACTCCTGAGCTTGCCATCCAAGTCCTTGTTCAGTTTGATAAGTCGATGACGGAAGCTCTTGACAGCCAAGTTAAAAGCAAGGTGACCATCAAGGGGCACTTGCACACCTACAGATTCTGTGACAATGTGTGGACGTTCATTGTTCAAGATGCCATTTTCAAGTATGACGAAACCCAGGAGAATGTTGGTCAAGTTAAAATAGTGGCATGTGACTCCAAGCTGCTGACGCAGTGATTCATGCTTAGCATTTCATGTCTAGTTGCTGATAAAAGATGGTATTGATTAAGAGTGTAGAAAAGGGGTACGATAAAAAAGTTGGGAGGTTTTGTTCTATCGTTGTACCTGCTAGAACGTGACATCATAACAAAATGTTGAATAATCTTATCAGCCTAAAACTTGTGTAatttttgtcttctatgttacttttttcttgttttttcatattttgtCACTGTTATTCGTGTTTCGTGATGTATTTGGTGTAATAGGATGGATTAGGAAAAATGTAATGTTATTGCCACGGGGCTATGAACTCTCTCAGCTTTTGTTTGTAGTACAAGTTCCTTTAGTATGCG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Aan.3184 | translated coding region predicted by ESTScan from UniGene Aan.3184 | MATFELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEALDSQVKSKVTIKGHLHTYRFCDNVWTFIVQDAIFKYDETQENVGQVKIVACDSKLLTQ |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPIR: PIRSF009415 IPR003194
|
1-106 | Transcription initiation factor IIA, gamma subunit Transcription initiation factor IIA, gamma subunit
|
MATFELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEALDSQVKSKVTIKGHLHTYRFCDNVWTFIVQDAIFKYDETQENVGQVKIVACDSKLLTQ |
| BlastProDom: PD009224 IPR015872
|
1-50 | Q7FPX2_ORYSA_Q7FPX2; Transcription initiation factor IIA, gamma subunit
|
MATFELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEALD |
| HMMPanther: PTHR10966 IPR003194
|
1-103 | TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 Transcription initiation factor IIA, gamma subunit
|
MATFELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEALDSQVKSKVTIKGHLHTYRFCDNVWTFIVQDAIFKYDETQENVGQVKIVACDSKL |
| Gene3D: G3DSA:1.10.287.190 IPR015872
|
2-54 | no description Transcription initiation factor IIA, gamma subunit
|
ATFELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEALDSQVK |
| HMMPfam: PF02268 IPR015872
|
3-49 | TFIIA_gamma_N Transcription initiation factor IIA, gamma subunit
|
TFELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEAL |
| superfamily: SSF47396 IPR009083
|
4-54 | Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA, helical
|
FELYRRSTIGMCLTETLDEMVSNGVLTPELAIQVLVQFDKSMTEALDSQVK |
| superfamily: SSF50784 IPR009088
|
52-102 | Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA, beta-barrel
|
QVKSKVTIKGHLHTYRFCDNVWTFIVQDAIFKYDETQENVGQVKIVACDSK |
| HMMPfam: PF02751 IPR015871
|
52-101 | TFIIA_gamma_C Transcription initiation factor IIA, gamma subunit
|
QVKSKVTIKGHLHTYRFCDNVWTFIVQDAIFKYDETQENVGQVKIVACDS |
| Gene3D: G3DSA:2.30.18.10 IPR009088
|
55-105 | no description Transcription factor IIA, beta-barrel
|
SKVTIKGHLHTYRFCDNVWTFIVQDAIFKYDETQENVGQVKIVACDSKLLT |
List of Contributions
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