PRGDB00065564 (Afp.2)

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Afp.2
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 74554509 (DT755269)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Aquilegia formosa x Aquilegia pubescens

Comment?

EST1189118 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1XJ54, mRNA sequence

DNA Sequence

GGGGCAAACACATGCCGCTAACGTAGAATTTATGAACATCATTACAAAAAAATTAGGTATTTACATTCATAAAACAACAACAGATCatttcttcctcttcctcttcttttcttttcttttcttGTAGAACTCAACAGATTTACAGATGTGGGGACTATCTTACAAAAAATTAGAAATGCATGGGCTCTTTTAGTTGAGTCCCATGACTATGAAGGATTCAGTTTCTGGTCCCTTTTAGCTTGAACTCACTATATCACACCCAAAGCTCAAATGGGAGAAGTGGCGAAGGAAAAGAAAATCCAATACAAAAAAGGACATTGTCAAACTTCAAGTGGTATGTTGTCAAGGGATTTCTCTGTTCGAACTCTGCTGAGAGGAATTTGAGTTTCCGATTGTTGGTCTATGTCAATAGCAATTTCTTCTTCTGTGGCTGACAAGATTCGCTTGTGACTCTTCCTACTCTGTCTCAACTTAACTATTCGAAGCAGTGCCTGAACAATATCCCTCATAGAGGGCCGTTTCTTTGGGATGCGATTAATACATTTGTATGCAAGCGCTGCCACGTCATTTAATTCTTTCACATCGAATTTCCCATCCAGACGAGAATCCGCTATCTCCTCCCAACCAACTCTCCCCCCAGCATTCATAGCTGCAAGCTCGACTAACTCTATGAGGCCCTGTTGAGGATTTCTCCCAGCAATAAGTTCAAAGAGTAGGACTCCAAAGCTGTAACAATCACTTTTCTTTGTAAAAGCCCTTGTTGATATGTACTCAGGGTCAAGATATCCAAAAGTTCCCCTGACATTAGATGCATGCTGGTCAACCATTTCTTCCCTTGAAAGTCCAAAGTCAGCTACTCTAGCTTTCATGGCCTGATCTAACAGTATGTTAGAAGATTTGATGTCCCGGTGCACAACACGAGGAACAGCACCATCATGAAGATACTCTAAACCCCTTGCCACATCTAGAG


Protein sequences

Name Description Sequence
Afp.2 translated coding region predicted by ESTScan from UniGene Afp.2

XLDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQALLRIVKLRQSRKSHKRILSATEEEIAIDIDQQSETQIPLSRVRTEKSLDNIPLEV

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-178 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

XLDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQALLRIVKLRQSRKSHKRI

HMMSmart: SM00219
IPR020635
1-162 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

XLDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQAL

superfamily: SSF56112
IPR011009
2-162 Protein kinase-like (PK-like)
Protein kinase-like domain

LDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQAL

HMMPanther: PTHR24420:SF419
2-212 SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED

LDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQALLRIVKLRQSRKSHKRILSATEEEIAIDIDQQSETQIPLSRVRTEKSLDNI

HMMPanther: PTHR24420
2-212 FAMILY NOT NAMED,FAMILY NOT NAMED

LDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQALLRIVKLRQSRKSHKRILSATEEEIAIDIDQQSETQIPLSRVRTEKSLDNI

HMMSmart: SM00220
IPR002290
2-166 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

LDVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQALLRIV

HMMPfam: PF00069
IPR017442
3-161 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

DVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQA

Gene3D: G3DSA:1.10.510.10
3-186 no description

DVARGLEYLHDGAVPRVVHRDIKSSNILLDQAMKARVADFGLSREEMVDQHASNVRGTFGYLDPEYISTRAFTKKSDCYSFGVLLFELIAGRNPQQGLIELVELAAMNAGGRVGWEEIADSRLDGKFDVKELNDVAALAYKCINRIPKKRPSMRDIVQALLRIVKLRQSRKSHKRILSATEEEI

PatternScan: PS00108
IPR008271
19-31 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VVHRDIKSSNILL






List of Contributions

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Analyses

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