PRGDB00065573 (Afp.307)

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Afp.307
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 74538324 (DT744747)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Aquilegia formosa x Aquilegia pubescens

Comment?

EST1178596 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1VR94, mRNA sequence

DNA Sequence

TCTGTCTGCCTCCACATATAGTCAATAGATATATATAGAGAGACGGTGATCGAACATCATATTACCAATATTGAGAAACGCCTATACATGGTTAAACTCCACTTTCAATACTGTTACAGCAAACTCATTCAACCTTTTAAACCACTTTCTTCTTTTGCCGTATGAAGCAGTGTCACCACATTTTAACCCATAGTTAGAGTGATCAACGCTTAATCCTTACTTCAGAACTTCATATCTCGGGTAGTTGAGGCATCACTACTTGCTGAGGGGTTGAGCCCGTAGGTGCTTGTATCTCCATCTCCCTGGCTATCGAAGGCCATCTTTCTGAATTTTTTTAAGTCCTCGTTATAAGCTCTGGTATTGTACTCTGAGCTTAAATTTGAACTTGAGCTATTGGTAGCTTTTATTCCCTCACTCAAGTCCTCCAATGAGGCATCGCCTTCCAGTGTACGTACAATCTGACTCATTTTTGGTCGTCTTTTCGCAGAATGGCGAATGCTTGCTGAAGCACATGCTATCATGCGTGCAATTTCGTTGTGGTTGTACACATTGTGCAAACGTGGATCAACTAGCTCATCATAATCCTCATCAGCTAATGCAGTTGTCAGTATTGGCCTAGCCCAATCTACTAAGCTGTCATCCATGTATTTATTGGTAGTATCCACGGGACGTCGTCCAGTTATCAACTCCAAGAGCATAACTCCAAAAGAGAAGACATCGGATTTCTCAGTTAGTTTCCCACTTGATGCGTACTCAGGAGCTAAATAACCAAAAGTACCCATGACACGTGTTGAGACATGAGTGAAATTATCTTGAGAAAGTTTAGCCAATCCAAAGTCTGCCACCATGGCTTCATAATTATTGTCCAAGAGAATATTAGCGGCTTTGATGTCACGATGGATAATGCGGGGATGGCAATCTTCATGGAGGTACGCAAGTCCTTTTGCAGAACCAATTGCAATATTGAGCCTCTTGG


Protein sequences

Name Description Sequence
Afp.307 translated coding region predicted by ESTScan from UniGene Afp.307

XKRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRAYNEDLKKFRKMAFDSQGDGDTSTYGLNPSASSDASTTRDMKF

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-184 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

XKRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASL

HMMPanther: PTHR24420:SF822
2-247 SUBFAMILY NOT NAMED

KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRAYNEDLKKFRKMAFDSQGDGDTSTYGLNPSASSDASTTR

HMMPanther: PTHR24420
2-247 FAMILY NOT NAMED,FAMILY NOT NAMED

KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRAYNEDLKKFRKMAFDSQGDGDTSTYGLNPSASSDASTTR

HMMSmart: SM00219
IPR020635
2-178 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTL

HMMSmart: SM00220
IPR002290
2-166 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAK

superfamily: SSF56112
IPR011009
3-209 Protein kinase-like (PK-like)
Protein kinase-like domain

RLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRA

Gene3D: G3DSA:1.10.510.10
3-205 no description

RLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEY

HMMPfam: PF00069
IPR017442
9-174 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

GSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQI

PatternScan: PS00108
IPR008271
25-37 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDIKAANILL

Seg: seg
195-203 seg

NSSSSNLSS






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Analyses

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