PRGDB00065573 (Afp.307)

Afp.307
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	74538324 (DT744747)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Aquilegia formosa x Aquilegia pubescens
	Comment?

EST1178596 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1VR94, mRNA sequence

DNA Sequence

TCTGTCTGCCTCCACATATAGTCAATAGATATATATAGAGAGACGGTGATCGAACATCATATTACCAATATTGAGAAACGCCTATACATGGTTAAACTCCACTTTCAATACTGTTACAGCAAACTCATTCAACCTTTTAAACCACTTTCTTCTTTTGCCGTATGAAGCAGTGTCACCACATTTTAACCCATAGTTAGAGTGATCAACGCTTAATCCTTACTTCAGAACTTCATATCTCGGGTAGTTGAGGCATCACTACTTGCTGAGGGGTTGAGCCCGTAGGTGCTTGTATCTCCATCTCCCTGGCTATCGAAGGCCATCTTTCTGAATTTTTTTAAGTCCTCGTTATAAGCTCTGGTATTGTACTCTGAGCTTAAATTTGAACTTGAGCTATTGGTAGCTTTTATTCCCTCACTCAAGTCCTCCAATGAGGCATCGCCTTCCAGTGTACGTACAATCTGACTCATTTTTGGTCGTCTTTTCGCAGAATGGCGAATGCTTGCTGAAGCACATGCTATCATGCGTGCAATTTCGTTGTGGTTGTACACATTGTGCAAACGTGGATCAACTAGCTCATCATAATCCTCATCAGCTAATGCAGTTGTCAGTATTGGCCTAGCCCAATCTACTAAGCTGTCATCCATGTATTTATTGGTAGTATCCACGGGACGTCGTCCAGTTATCAACTCCAAGAGCATAACTCCAAAAGAGAAGACATCGGATTTCTCAGTTAGTTTCCCACTTGATGCGTACTCAGGAGCTAAATAACCAAAAGTACCCATGACACGTGTTGAGACATGAGTGAAATTATCTTGAGAAAGTTTAGCCAATCCAAAGTCTGCCACCATGGCTTCATAATTATTGTCCAAGAGAATATTAGCGGCTTTGATGTCACGATGGATAATGCGGGGATGGCAATCTTCATGGAGGTACGCAAGTCCTTTTGCAGAACCAATTGCAATATTGAGCCTCTTGG

Protein sequences

Name	Description	Sequence
Afp.307	translated coding region predicted by ESTScan from UniGene Afp.307	XKRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRAYNEDLKKFRKMAFDSQGDGDTSTYGLNPSASSDASTTRDMKF

Domains

Domain	Start-End	Description	Sequence
ProfileScan: PS50011 IPR000719	1-184	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	XKRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASL
HMMPanther: PTHR24420:SF822	2-247	SUBFAMILY NOT NAMED	KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRAYNEDLKKFRKMAFDSQGDGDTSTYGLNPSASSDASTTR
HMMPanther: PTHR24420	2-247	FAMILY NOT NAMED,FAMILY NOT NAMED	KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRAYNEDLKKFRKMAFDSQGDGDTSTYGLNPSASSDASTTR
HMMSmart: SM00219 IPR020635	2-178	Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain	KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTL
HMMSmart: SM00220 IPR002290	2-166	Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas	KRLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAK
superfamily: SSF56112 IPR011009	3-209	Protein kinase-like (PK-like) Protein kinase-like domain	RLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEYNTRA
Gene3D: G3DSA:1.10.510.10	3-205	no description	RLNIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQIVRTLEGDASLEDLSEGIKATNSSSSNLSSEY
HMMPfam: PF00069 IPR017442	9-174	Pkinase,Ser-thr Serine/threonine-protein kinase-like domain	GSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKLSQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTNKYMDDSLVDWARPILTTALADEDYDELVDPRLHNVYNHNEIARMIACASASIRHSAKRRPKMSQI
PatternScan: PS00108 IPR008271	25-37	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	IIHRDIKAANILL
Seg: seg	195-203	seg	NSSSSNLSS

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Analyses

Blast

Blast matches against Reference R-Genes. Show