PRGDB00065575 (Afp.499)

Afp.499
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	74529150 (DT739160)
Gene Class	Unknown
Domain Type
Gene Species	Aquilegia formosa x Aquilegia pubescens
	Comment?

EST1173009 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1UL72, mRNA sequence

DNA Sequence

TCGATATATTGCATCTGTAAAAGCTACAAAGACAAGTGTGACTCACTGCTATCGAAAGCGTTGATGGGAAGGCATAGGAGATTGGGAGGGAGCTAAGATTGTAAATTTCCATTTTCCAGGAAGCCTTTTTCTCTGAGGCTCTCCACTGCTTCTCGGACTGCATCCTCAATTGGTGTAAATACCAGGCCCAGATCAATTAGTCTCTTAGCTGCATCTTTGCACCCCATCAAACCCGGTTGTGTTTCTTCGTTGAACCTGTGAATGGGAAATTGAGGGTAGAGTTTGGAGACAGTATGGGCGAAATCACGGAACTGATAGATGCCGTTGGTGCAGAGGTACCTCCCAGAAGCAGAGGGAGTCTCAAAAAGAAGCAGTTGGGCTTTGGCAACGTCTCTGACATGAACAGCGCCCAGCCAATGATACTCTTGTGTGTCCTTAGATCCCTGTAGCATATGTAGCAGAACGGCAGAACTGGCATTCAAAGAAGGCTGGAGAAGAGAACCTAGACAAGTGGAAGGATGGATTGCAACAACATCGATATCATTGTTTTTGGAATATTCCCAAGCAGCTTTCTCAGCCAATGTTTTTGATACTGGATACCATTTCTGATGGGATTTGCAGTAGTCGAGATCGGTCCAAGAGGTCTCGTTGAAAGGAATGGAGTTGTTGGGCCATGCTGGGTTTGGGACTAGGGCTGAGATGGAAGATGTTAAGACCACCCTCCTGACTGTTCCCGCTAAGGATGCTGCTTGGAGAACAGCTGGGACAATAAGCTCCAAATAGGGATCTTTAGGATCATCCAAGCTGCAAGGTGATGCCACGTGGAAAACACCATGGCAACCATGAACAGCTTTACAGATAGCCTCTTTGTCAAGG

Protein sequences

Name	Description	Sequence
Afp.499	translated coding region predicted by ESTScan from UniGene Afp.499	XLDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLREKGFLENGNLQSXLPPNLLCLPINAFDSSESHLSLXLLQMQYIX

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR10366:SF9	2-256	CINNAMOYL-COA REDUCTASE,CINNAMOYL-COA REDUCTASE	LDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLREKGFLEN
HMMPanther: PTHR10366	2-256	FAMILY NOT NAMED,NAD DEPENDENT EPIMERASE/DEHYDRATASE	LDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLREKGFLEN
superfamily: SSF51735	2-250	NAD(P)-binding Rossmann-fold domains	LDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLRE
Gene3D: G3DSA:3.40.50.720 IPR016040	3-201	no description NAD(P)-binding domain	DKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLY
HMMPfam: PF01370 IPR001509	3-181	Epimerase NAD-dependent epimerase/dehydratase	DKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRY
Seg: seg	256-273	seg	NGNLQSXLPPNLLCLPIN
Seg: seg	277-287	seg	SSESHLSLXLL

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Analyses

Blast

Blast matches against Reference R-Genes. Show