PRGDB00065575 (Afp.499)
Afp.499 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 74529150 (DT739160) |
Gene Class | Unknown |
Domain Type | |
Gene Species | Aquilegia formosa x Aquilegia pubescens |
DNA Sequence
TCGATATATTGCATCTGTAAAAGCTACAAAGACAAGTGTGACTCACTGCTATCGAAAGCGTTGATGGGAAGGCATAGGAGATTGGGAGGGAGCTAAGATTGTAAATTTCCATTTTCCAGGAAGCCTTTTTCTCTGAGGCTCTCCACTGCTTCTCGGACTGCATCCTCAATTGGTGTAAATACCAGGCCCAGATCAATTAGTCTCTTAGCTGCATCTTTGCACCCCATCAAACCCGGTTGTGTTTCTTCGTTGAACCTGTGAATGGGAAATTGAGGGTAGAGTTTGGAGACAGTATGGGCGAAATCACGGAACTGATAGATGCCGTTGGTGCAGAGGTACCTCCCAGAAGCAGAGGGAGTCTCAAAAAGAAGCAGTTGGGCTTTGGCAACGTCTCTGACATGAACAGCGCCCAGCCAATGATACTCTTGTGTGTCCTTAGATCCCTGTAGCATATGTAGCAGAACGGCAGAACTGGCATTCAAAGAAGGCTGGAGAAGAGAACCTAGACAAGTGGAAGGATGGATTGCAACAACATCGATATCATTGTTTTTGGAATATTCCCAAGCAGCTTTCTCAGCCAATGTTTTTGATACTGGATACCATTTCTGATGGGATTTGCAGTAGTCGAGATCGGTCCAAGAGGTCTCGTTGAAAGGAATGGAGTTGTTGGGCCATGCTGGGTTTGGGACTAGGGCTGAGATGGAAGATGTTAAGACCACCCTCCTGACTGTTCCCGCTAAGGATGCTGCTTGGAGAACAGCTGGGACAATAAGCTCCAAATAGGGATCTTTAGGATCATCCAAGCTGCAAGGTGATGCCACGTGGAAAACACCATGGCAACCATGAACAGCTTTACAGATAGCCTCTTTGTCAAGG
Protein sequences
Name | Description | Sequence |
---|---|---|
Afp.499 | translated coding region predicted by ESTScan from UniGene Afp.499 | XLDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLREKGFLENGNLQSXLPPNLLCLPINAFDSSESHLSLXLLQMQYIX |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR10366:SF9 | 2-256 | CINNAMOYL-COA REDUCTASE,CINNAMOYL-COA REDUCTASE | LDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLREKGFLEN |
HMMPanther: PTHR10366 | 2-256 | FAMILY NOT NAMED,NAD DEPENDENT EPIMERASE/DEHYDRATASE | LDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLREKGFLEN |
superfamily: SSF51735 | 2-250 | NAD(P)-binding Rossmann-fold domains | LDKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLYPQFPIHRFNEETQPGLMGCKDAAKRLIDLGLVFTPIEDAVREAVESLRE |
Gene3D: G3DSA:3.40.50.720 IPR016040
|
3-201 | no description NAD(P)-binding domain
|
DKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRYLCTNGIYQFRDFAHTVSKLY |
HMMPfam: PF01370 IPR001509
|
3-181 | Epimerase NAD-dependent epimerase/dehydratase
|
DKEAICKAVHGCHGVFHVASPCSLDDPKDPYLELIVPAVLQAASLAGTVRRVVLTSSISALVPNPAWPNNSIPFNETSWTDLDYCKSHQKWYPVSKTLAEKAAWEYSKNNDIDVVAIHPSTCLGSLLQPSLNASSAVLLHMLQGSKDTQEYHWLGAVHVRDVAKAQLLLFETPSASGRY |
Seg: seg | 256-273 | seg | NGNLQSXLPPNLLCLPIN |
Seg: seg | 277-287 | seg | SSESHLSLXLL |
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