PRGDB00065578 (Afp.552)
| Afp.552 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 74555085 (DT755596) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Aquilegia formosa x Aquilegia pubescens |
DNA Sequence
TAGACCAAGATTCCCACCACCTCTACCACTTCCTCTTCCTCTCCCTAACAATAACAACTCTTCTTTCTCTACCGTCGATCGTCTATCAGATCTTGAGAAATTACAAGTTCTTGGTCATGGAAATAGTGGTACCGTTTACAAAGTAAGACATAAGCGCACGTTAGCAACTTATGCATTAAAAGTGATCCATGGAGATTGTGATACTACTGTACGCCGACAGATCTTTCGTGAGATGGAGATTCTTCGTCGTACAGATTCTCCTTATGTTGTTAGTTGCAATGGAATCTTCGAAAAATCACCAGGAGATATCGCGATTCTGTTAGAATATATGGATTCGGTTACACTGGATAATGTACTCCGCATTAACGGAACTTTCTCGGAATCTTCTTTGGCGAATGTTGCTCTTCAAGTTCTTAACGGTCTTAACTATCTTCACACACATAAGATTGTTCATCGGGATATAAAACCGTCAAATCTTCTTGTTAATTCGAAGATGGAAGTCAAAATAGCTGACTTTGGAGTCAGTAAAATCATGTGCCGTTCACTTGATCCTTGTGATTCGTATGTTGGCACGTGTGCTTATATGAGTCCAGAAAGATTTGATCCAGATACTTATGGTGCTAATTATAATGGTTATGCTGGTGATATTTGGAGCTTAGGGCTCACGTTAGTAGAACTCTATGTTGGTCACTTTCCATTTTCACCACCAGGACAAAAACCTGATTGGGCTTCACTAATGTGCGCAATATGTTTTAGTGATCCACCTAGTTTGCAAGAAAGTTCAGCTTCAGAAGAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Afp.552 | translated coding region predicted by ESTScan from UniGene Afp.552 | XRPRFPPPLPLPLPLPNNNNSSFSTVDRLSDLEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPGQKPDWASLMCAICFSDPPSLQESSASEE |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 6-20 | seg | PPPLPLPLPLPNNNN |
| HMMPanther: PTHR24361:SF31 | 7-266 | SUBFAMILY NOT NAMED | PPLPLPLPLPNNNNSSFSTVDRLSDLEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPGQKPDWASLMCAICFSDPPSLQESSASEE |
| HMMPanther: PTHR24361 | 7-266 | FAMILY NOT NAMED,MITOGEN-ACTIVATED KINASE KINASE KINASE | PPLPLPLPLPNNNNSSFSTVDRLSDLEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPGQKPDWASLMCAICFSDPPSLQESSASEE |
| superfamily: SSF56112 IPR011009
|
18-234 | Protein kinase-like (PK-like) Protein kinase-like domain
|
NNNSSFSTVDRLSDLEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPF |
| Gene3D: G3DSA:3.30.200.20 | 21-138 | no description | SSFSTVDRLSDLEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQV |
| ProfileScan: PS50011 IPR000719
|
32-266 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
LEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPGQKPDWASLMCAICFSDPPSLQESSASEE |
| HMMSmart: SM00220 IPR002290
|
32-264 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
LEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPGQKPDWASLMCAICFSDPPSLQESSAS |
| HMMSmart: SM00219 IPR020635
|
32-265 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
LEKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPGQKPDWASLMCAICFSDPPSLQESSASE |
| HMMPfam: PF00069 IPR017442
|
33-238 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
EKLQVLGHGNSGTVYKVRHKRTLATYALKVIHGDCDTTVRRQIFREMEILRRTDSPYVVSCNGIFEKSPGDIAILLEYMDSVTLDNVLRINGTFSESSLANVALQVLNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPG |
| PatternScan: PS00107 IPR017441
|
38-61 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGHGNSGTVYKVRHKRTLATYALK |
| Gene3D: G3DSA:1.10.510.10 | 139-238 | no description | LNGLNYLHTHKIVHRDIKPSNLLVNSKMEVKIADFGVSKIMCRSLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLVELYVGHFPFSPPG |
| PatternScan: PS00108 IPR008271
|
150-162 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IVHRDIKPSNLLV |
List of Contributions
There has not been any contribution yet.
