PRGDB00065589 (Afp.1253)
| Afp.1253 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 71718127 (DR948764) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Aquilegia formosa x Aquilegia pubescens |
DNA Sequence
ATTTTAAACCAGACAACTAAGAAATCCATTATTCGAGCAGAGAAATCCGCCAAACTTTATGTGAATATAGAAGATATCTTTTCAACCAAACTTAATATCATTAACCTTAATTGTTTCGGTTCCATTATCGAAAAATCTCCCCAAGGCAAGTTTTGCCGTATCCGAGATAAGAAGCTGATAACCCTGTTTTGTGTATCTGTTTCTGGGCAAGATTTTAGCGCCTTAGAAATGGAGAAGGATGGAGTAGGCGAGTCCTCTCCTAGAGGAGTACTAGATAACTGCTCGAGGAGCTTAGAATCCGAAACGAGTTCTTCTAAGGCTAGTACCTCTGATTCTGAATCTCCACCTACTAAAAATGCTTCACACTGGCGTAGTTTCTTGTCTATGTTGAAAAGTAGATCAATTAGGCGCTTAGCCAGCTTTCCTCCTGTTAGCGCTCCAAAGTTATCAAAAAGAATTAGTAGAAGCATGAGAGAGAATCCAGCCCCATCATTAATTCCAGCTGAATATACCAATATGTATAGTTTCAAGTCTTCGTGGAGAAACTTCACGTTTGCTGAACTCCAAGCTGCAACCAAAAACTTCAGCTCTGAAAATTTGATTGGAAAAGGTGGTTTTGCGGAAGTTTACAAAGGTTGTTTGCAAGATGGCCAACATGTAGCAATTAAGCGACTGACACGTGGGACGTCAGATGAGAGAACTGGAGACTTCCTAACTGAGCTTGGAATTATAGTCCATGTTAACCATCATAATACTGCAAAGTTGATAGGGTACGGGATCGAAGGAGGAATGCACCTGGTTCTTGAATTGTCTCCCCATGGATGCTTAGCCTCTCTACTCTATGGTTCAAAGGAGAAACTGGACTGGGGTATCAGATACAAAATTGCTTTGGGGATAGCTG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Afp.1253 | translated coding region predicted by ESTScan from UniGene Afp.1253 | ILNQTTKKSIIRAEKSAKLYVNIEDIFSTKLNIINLNCFGSIIEKSPQGKFCRIRDKKLITLFCVSVSGQDFSALEMEKDGVGESSPRGVLDNCSRSLESETSSSKASTSDSESPPTKNASHWRSFLSMLKSRSIRRLASFPPVSAPKLSKRISRSMRENPAPSLIPAEYTNMYSFKSSWRNFTFAELQAATKNFSSENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLELSPHGCLASLLYGSKEKLDWGIRYKIALGIAX |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF794 | 67-300 | SUBFAMILY NOT NAMED | VSGQDFSALEMEKDGVGESSPRGVLDNCSRSLESETSSSKASTSDSESPPTKNASHWRSFLSMLKSRSIRRLASFPPVSAPKLSKRISRSMRENPAPSLIPAEYTNMYSFKSSWRNFTFAELQAATKNFSSENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLELSPHGCLASLLYGSKEKLDWGIRYKIALGIA |
| HMMPanther: PTHR24420 | 67-300 | FAMILY NOT NAMED,FAMILY NOT NAMED | VSGQDFSALEMEKDGVGESSPRGVLDNCSRSLESETSSSKASTSDSESPPTKNASHWRSFLSMLKSRSIRRLASFPPVSAPKLSKRISRSMRENPAPSLIPAEYTNMYSFKSSWRNFTFAELQAATKNFSSENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLELSPHGCLASLLYGSKEKLDWGIRYKIALGIA |
| Seg: seg | 95-114 | seg | SRSLESETSSSKASTSDSES |
| superfamily: SSF56112 IPR011009
|
167-300 | Protein kinase-like (PK-like) Protein kinase-like domain
|
PAEYTNMYSFKSSWRNFTFAELQAATKNFSSENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLELSPHGCLASLLYGSKEKLDWGIRYKIALGIA |
| Gene3D: G3DSA:3.30.200.20 | 176-270 | no description | FKSSWRNFTFAELQAATKNFSSENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLEL |
| ProfileScan: PS50011 IPR000719
|
195-301 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSSENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLELSPHGCLASLLYGSKEKLDWGIRYKIALGIAX |
| HMMPfam: PF07714 IPR001245
|
198-300 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
ENLIGKGGFAEVYKGCLQDGQHVAIKRLTRGTSDERTGDFLTELGIIVHVNHHNTAKLIGYGIEGGMHLVLELSPHGCLASLLYGSKEKLDWGIRYKIALGIA |
| PatternScan: PS00107 IPR017441
|
201-223 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGKGGFAEVYKGCLQDGQHVAIK |
List of Contributions
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