PRGDB00065599 (Afp.1754)

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Afp.1754
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 71680918 (DR912665)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Aquilegia formosa x Aquilegia pubescens

Comment?

EST1104204 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1L264, mRNA sequence

DNA Sequence

ATCTTTGTTTACAGAGTTAAAAAATAAGAGGAATGAGGGGTGAGTGAGCACACATCGGCAATTACTTATTGATCATAATAATGTGAAGAAGATGGGATCTTCTCTAGGACCTGTACTACTTCCTTCATGGAAGGCCTTTTCTGTTGAACTATAGAAGCACAATTAAATCCTAGTTTAAAACAATTCACTAAGATATCCTCTTTTCCTTCTACCTCAGCTCGGATAGACACGTCAACCATTCTCACAACCCGATTTGATTCTTCCAATACAAAACCATTGGTCCAATGACTCAACTCTGTATCAGAATATGTTTTCCCAGTTAGTAGCTCAAGCAACACAAGGCCAAAAGAGTATACATCCCACTTTGCGTTGGGCTTGAGGTTCTTGAGTGACTCAGGTGCATGGTAGGGCGAAGGACCAATCATGGATCCAGCGCTAGGGCTCGGGCTTGCACCCATTGGGAGGTCTTGAAAGCTATCCCGTGAAGCGGTGGATCTTTTGCTCCCAAAATTCCGAGCTGACCCGCCCGGTTTACTGCTAGTGTCGCCCCAAACCAACTTTTCAAGCCCAAAATCGCCAATTTGAGGCTCCATGTTTGCTCCCAAGAGAATGTTACTTGGTTTTAAGTTGCCATGTACATGTTTTTTGTCATGCAGGTAGGCTAGCCCACGAGCAACTCCTCTTACTATCCTAAGCCTTGTTTCCCAAGATAGATGATATGGAGATGAACCTGGTCTTTTGTAACTGACGTTGGCGAGGCTTCCATTAGGTACATGATCATAGATGATAAGCTTTTCATCAGAACCCCAGTAAAACCCTCGTATGCGCACGACATTAGGGTGGCGTAATTTAGCAATTAGCCTAACCTGGTTCTCAAAATCTTTGAACCTTTCAACTCCACTTTCAC


Protein sequences

Name Description Sequence
Afp.1754 translated coding region predicted by ESTScan from UniGene Afp.1754

XESGVERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVLEKIPSSSHYYDQ

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-279 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

XESGVERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVLEKIPSSSHYYD

HMMSmart: SM00219
IPR020635
1-268 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

XESGVERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVL

HMMPanther: PTHR24420:SF470
2-271 SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED

ESGVERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVLEKI

HMMPanther: PTHR24420
2-271 FAMILY NOT NAMED,FAMILY NOT NAMED

ESGVERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVLEKI

HMMSmart: SM00220
IPR002290
3-268 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

SGVERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVL

superfamily: SSF56112
IPR011009
6-268 Protein kinase-like (PK-like)
Protein kinase-like domain

ERFKDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQVL

Gene3D: G3DSA:3.30.200.20
9-78 no description

KDFENQVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGV

HMMPfam: PF00069
IPR017442
14-266 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

QVRLIAKLRHPNVVRIRGFYWGSDEKLIIYDHVPNGSLANVSYKRPGSSPYHLSWETRLRIVRGVARGLAYLHDKKHVHGNLKPSNILLGANMEPQIGDFGLEKLVWGDTSSKPGGSARNFGSKRSTASRDSFQDLPMGASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQ

Seg: seg
150-167 seg

PMGASPSPSAGSMIGPSP

Gene3D: G3DSA:1.10.510.10
152-266 no description

GASPSPSAGSMIGPSPYHAPESLKNLKPNAKWDVYSFGLVLLELLTGKTYSDTELSHWTNGFVLEESNRVVRMVDVSIRAEVEGKEDILVNCFKLGFNCASIVQQKRPSMKEVVQ






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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