PRGDB00065704 (Afp.7549)

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Afp.7549
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 74562025 (DT759831)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Aquilegia formosa x Aquilegia pubescens

Comment?

EST1193680 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1YB13, mRNA sequence

DNA Sequence

ACCTCAATTTGAATAACGATTACAAAACCTATAATTACTATTTCTAATATATGCTAGACACATATACAGATAATACAAAAGGTAGAAGTGCACAGGATGAACTATAAATAACATTTAACATTGCTTGCTACCTGTCTACTTCTCTTCTTGGCAATCTTCCCTTTTCCATCTTGCCATGTTGGCTTGGGTGCCACTATCATACCCACTACTGTCACCTGATTCAGTTGCCCGCCTCAGACTGTCACGATGTGGACGTCCTGGTTCCCGCCCAGTGCGACGATCTTCTCTGAAGGGGAAATCATCGGCCTCAAGCATGTGTATCACATGCCCCATCTTTGGCCTCTTCTGCAAATCTGGATCCACACATTTCAAAGCTACTAAAAGGGCTCGCTTCAATGCCCTTGATGACGGTTTCTCAGTCATCTTAGGATCCAACACTCCCTCTGCATTCCGGCTAGCAACCATGGATTTAAGCCACTCAACTAGGTTGACCTCTCCAGAAGGCCTGTTGTAATCAACTGGGTTTCTACCAGTAATTATCTCCATAATAAGAATACCGAAACTGTACACATCGCTCCGCTCATTTAACATGCCTGTACTTGCATATTCGGGAGCTACATATCCAAATGTTCCCATCACGCGGGTTGTAACATAGCTGCTGTCTGAACCCAAAAGTTTTGCAAGTCCAAAGTCAGACACCTTAGGGTTCCATTGCCTATCGAGTAAAATGTTGCTTGATTTAACATCACGGTGAACAACCTTGGGTTCAAGGCCCTCATGAAGATATGTCAACCCTTTTGCCGTTCCAAGGATAATGTTCATCCGAATCTCCCATGTAAGAGGACTGTAAGGACCTACATCCCCA


Protein sequences

Name Description Sequence
Afp.7549 translated coding region predicted by ESTScan from UniGene Afp.7549

XGDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHMLEADDFPFREDRRTGREPGRPHRDSLRRATESGDSSGYDSGTQANMARWKREDCQEEK

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-173 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

XGDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDL

HMMPanther: PTHR24420:SF827
2-220 SUBFAMILY NOT NAMED

GDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHMLEADDFPFREDRRTGREPGRPHRDSLRRATESGDS

HMMPanther: PTHR24420
2-220 FAMILY NOT NAMED,FAMILY NOT NAMED

GDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHMLEADDFPFREDRRTGREPGRPHRDSLRRATESGDS

HMMSmart: SM00219
IPR020635
2-186 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

GDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHML

HMMSmart: SM00220
IPR002290
3-193 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

DVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHMLEADDFPF

superfamily: SSF56112
IPR011009
9-194 Protein kinase-like (PK-like)
Protein kinase-like domain

PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHMLEADDFPFR

Gene3D: G3DSA:1.10.510.10
9-223 no description

PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVIHMLEADDFPFREDRRTGREPGRPHRDSLRRATESGDSSGY

HMMPfam: PF00069
IPR017442
9-183 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLGSDSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPSGEVNLVEWLKSMVASRNAEGVLDPKMTEKPSSRALKRALLVALKCVDPDLQKRPKMGHVI

PatternScan: PS00108
IPR008271
37-49 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VVHRDVKSSNILL

Seg: seg
156-167 seg

RALKRALLVALK






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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