PRGDB00065743 (Ahy.734)

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Ahy.734
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 30420452 (CD038614)
Gene Class Unknown
Domain Type
Gene Species Arachis hypogaea

Comment?

UTPPI009_G10 USDA-Tifton Peanut Immature Pod cDNA Library (UTPP) Arachis hypogaea cDNA clone UTPPI009_G10 5', mRNA sequence

DNA Sequence

GGGAAAACGAAGGAAGAAGAATTGAAGCAGAGCTCAACGAACGATAACGACAACAAACTTCACTCAACTCTTCCAAATCCATTTCTCGATTTCTCATCACTTATCGTCCAATAATGGCGACGTTCGAGTTGTACCGTAGATCAACGATCGGAATGTGCCTCACGGAGACTTTGGACGAGATGGTTCAAAACGGAACCCTTAGCCCAGAGCTTGCTATTCAGGTTCTCGTTCAGTTTGATAAGTCCATGGCTGAAGCATTGGAAACACAAGTTAAGAGCAAGGTCTCCATTAAGGGACATCTCCACACATACAGATTTTGTGACAACGTTTGGACCTTCATGTTACAAGATGCATTGATTAAGACTGATGACTGTCAAGAGAATGTTGGAAGAGTTAAAATTGTGGCATGTGATTCAAAGTTACTCACACAATAAACTTGCTGAATTTCCATGGACTGTGGATGAAGGAGTTGTTGTCATTTGCTTGTATCATGGGAATGGTGGTGGCAAAGACAATAGTCAAAGATGATCTTAATTCTCGAATGAACAGCAACCACGTAACAATATGGATTTTAAAGCCATTAATCTTCACACCTTTATTTAGTTAATGTTACATTCAGAATGCTACATGTTTAATTGGATGAGAATACTCTCCTTCACTGTACTGTTTTATAAACGAACTTATGGNTGAA


Protein sequences

Name Description Sequence
Ahy.734 translated coding region predicted by ESTScan from UniGene Ahy.734

MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMAEALETQVKSKVSIKGHLHTYRFCDNVWTFMLQDALIKTDDCQENVGRVKIVACDSKLLNNKLAEFPWTVDEGVVVICLYHGNGGGKDNSQR

Domains

Domain Start-End Description Sequence

BlastProDom: PD009224
IPR015872
1-50 T2AG_ARATH_Q39236;
Transcription initiation factor IIA, gamma subunit

MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMAEALE

HMMPanther: PTHR10966
IPR003194
1-110 TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2
Transcription initiation factor IIA, gamma subunit

MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMAEALETQVKSKVSIKGHLHTYRFCDNVWTFMLQDALIKTDDCQENVGRVKIVACDSKLLNNKLAE

Gene3D: G3DSA:1.10.287.190
IPR015872
2-54 no description
Transcription initiation factor IIA, gamma subunit

ATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMAEALETQVK

HMMPfam: PF02268
IPR015872
3-50 TFIIA_gamma_N
Transcription initiation factor IIA, gamma subunit

TFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMAEALE

superfamily: SSF47396
IPR009083
4-54 Transcription factor IIA (TFIIA), alpha-helical domain
Transcription factor IIA, helical

FELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMAEALETQVK

HMMPfam: PF02751
IPR015871
52-101 TFIIA_gamma_C
Transcription initiation factor IIA, gamma subunit

QVKSKVSIKGHLHTYRFCDNVWTFMLQDALIKTDDCQENVGRVKIVACDS

superfamily: SSF50784
IPR009088
52-102 Transcription factor IIA (TFIIA), beta-barrel domain
Transcription factor IIA, beta-barrel

QVKSKVSIKGHLHTYRFCDNVWTFMLQDALIKTDDCQENVGRVKIVACDSK

Gene3D: G3DSA:2.30.18.10
IPR009088
55-106 no description
Transcription factor IIA, beta-barrel

SKVSIKGHLHTYRFCDNVWTFMLQDALIKTDDCQENVGRVKIVACDSKLLNN






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Analyses

Blast

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