PRGDB00065842 (At.302)
| At.302 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 15027840 (AY045777) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AAAAACAGAACACAAGAAAGTGTCCTAGCTagagagagagagagagaTGAGAAATGTACCAAACTATCATCATTCTTACTTCATATTATTCATCATAATTCTGTTTCTTGCTTTCTCTGTTTATGCAAGCAACTTTTCAGCCACAGAATCTCTCACTATCTCAAGCAACAAAACCATTATATCTCCTAGTCAAATCTTCGAGCTCGGTTTCTTCAATCCCGACTCAAGTTCACGTTGGTATCTCGGCATATGGTACAAGATAATCCCTATAAGAACCTACGTATGGGTTGCAAACAGAGACAATCCTCTCTCTAGTTCCAACGGAACTCTCAAAATATCCGACAATAACCTCGTCATTTTCGATCAGTCCGATAGGCCTGTTTGGTCGACGAATATAACCGGAGGAGATGTGAGATCACCAGTGGCTGCAGAGCTTCTTGATTACGGTAATTTTGTTCTTAGAGACTCCAAAAATAATAAACCAAGTGGATTTTTGTGGCAGAGTTTCGATTTCCCGACAGATACTTTACTATCGGATATGAAAATGGGATGGGATAACAAAAGCGGAGGATTCAACAGAATCTTGAGATCTTGGAAAACCACAGATGATCCGTCAAGCGGAGATTTCTCGACTAAACTCCGAACCAGCGGGTTCCCGGAGTTTTACATATACAACAAAGAGTCCATAACGTACAGGAGCGGTCCATGGCTCGGAAATCGGTTTAGCAGCGTACCGGGGATGAAACCAGTTGATTACATAGACAACAGTTTCACAGAGAATAATCAACAAGTTGTTTACTCATACCGAGTCAACAAAACCAACATTTACTCGATATTAAGCCTAAGCTCCACGGGACTATTACAACGATTAACTTGGATGGAGGCAGCACAGAGTTGGAAACAGTTATGGTACTCACCAAAGGACCTATGTGATAACTACAAAGAGTGTGGGAATTACGGTTATTGCGATGCGAACACTTCACCTATTTGTAATTGTATCAAAGGGTTTGAGCCAATGAATGAGCAAGCGGCTTTGAGAGATGATTCTGTTGGTTGCGTGAGGAAGACGAAGCTAAGCTGTGACGGTAGAGATGGGTTTGTGCGGTTGAAGAAGATGAGACTGCCAGATACTACAGAGACAAGTGTGGACAAAGGAATTGGGTTGAAAGAATGTGAAGAGAGGTGCCTAAAGGGTTGTAATTGTACGGCGTTTGCTAATACGGATATTCGTAATGGCGGTTCAGGTTGTGTGATTTGGTCCGGAGGGCTGTTCGATATCCGAAATTATGCTAAGGGAGGTCAGGATCTTTACGTTAGAGTAGCTGCTGGTGATCTAGAGGACAAGAGAATCaaaagtaaaaaaaTCATAGGTTCGAGTATTGGAGTGAGCATTTTGCTTCTTTTAAGTTTCATCATCTTCCATTTTTGGAAAAGGAAGCAGAAGCGATCAATAACAATTCAAACACCTATTGTTGATCTTGTGAGAAGCCAAGATTCTCTAATGAACGAATTGGTAAAAGCAAGCAGGAGTTACACATCCAAAGAAAACAAAACCGATTATCTAGAGCTCCCATTGATGGAGTGGAAAGCTTTAGCCATGGCAACAAACAATTTTTCGACGGACAATAAGCTTGGACAAGGTGGTTTTGGTATTGTTTACAAGGGAATGTTACTTGATGGAAAAGAAATCGCGGTAAAGAGACTATCGAAAATGTCTTCACAAGGGACCGATGAGTTCATGAACGAGGTTAGATTAATTGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTAGGTTGTTGCGTCGATAAGGGTGAGAAGATGTTGATCTATGAGTACTTGAGAATCTAAGCCTTGACTCGCATCTCTTTGACCAAACACGAAGCTCTAACTTAAATTGGCAAAAGAGATTTGATATTATCAATGGTATTGCTAGAGGACTTCTATATCTTCACCAAGATTCACGGTGTAGGATTATCCATAGAGACTTGAAAGCAAGTAACGTATTGCTTGATAAAAATATGACTCCAAAGATCTCCGATTTTGGGATGGCGAGGATCTTTGGACGGGAGGAGACAGAGGCTAATACAAGGAGGGTGGTCGGAACTTACGGCTACATGTCTCCAGAATATGCAATGGACGGGATATTCTCGATGAAGTCGGATGTTTTCAGCTTTGGGGTCTTGCTTCTAGAGATTATAAGTGGAAAAAGAAACAAAGGATTCTACAACTCAAACCGTGATCTTAATCTCCTTGGTTTTGTGTGGAGGCATTGGAAGGAAGGAAAAGAGCTAGAGATTGTAGATCCGATCAACATCGATGCTTTGTCATCAGAATTCCCGACACATGAAATCTTAAGATGTATACAAATTGGTCTCTTGTGTGTTCAAGAACGAGCCGAAGACAGACCAGTGATGTCCTCGGTAATGGTGATGCTTGGAAGCGAAACTACGGCTATTCCTCAGCCTAAACGTCCTGGTTTTTGCGTGGGGAGAAGTTCTCTTGAGGTTGATTCTTCGTCAAGTACACAGCGAGACGATGAATGTACAGTGAACCAAGTCACTCTCTCGGTCATTGACGCTCGGTAATATGTAAGATTGTAAGTTATCGACCCACTCTTTTTATATAAAAATATAGACACAGGGCAGTAAGGTCTCCACACTAGGGGCTGATACTTTGCATCAGTCAGTGATACCTTGTGTAACAAGTTTCCTTTGCCTCCATGGAACGTATACAAAAGTTGTATTCAACTTCGTTGTAAATATAATTAAGATaaaaagaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.302 | translated coding region predicted by ESTScan from UniGene At.302 | XKTEHKKVSXLEREREMRNVPNYHHSYFILFIIILFLAFSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF432 | 10-863 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | XLEREREMRNVPNYHHSYFILFIIILFLAFSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR |
| HMMPanther: PTHR24420 | 10-863 | FAMILY NOT NAMED,FAMILY NOT NAMED | XLEREREMRNVPNYHHSYFILFIIILFLAFSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR |
| Seg: seg | 28-37 | seg | FILFIIILFL |
| ProfileScan: PS50927 IPR001480
|
45-167 | BULB_LECTIN Bulb-type lectin domain
|
NFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLW |
| HMMSmart: SM00108 IPR001480
|
51-173 | Bulb-type mannose-specific lectin Bulb-type lectin domain
|
SLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQSFDFP |
| superfamily: SSF51110 IPR001480
|
76-239 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
SSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLG |
| HMMPfam: PF01453 IPR001480
|
92-206 | B_lectin Bulb-type lectin domain
|
RTYVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPS |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
207-243 | no description Bulb-type lectin domain
|
SGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFS |
| HMMPfam: PF00954 IPR000858
|
232-341 | S_locus_glycop S-locus glycoprotein
|
YRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMN |
| HMMPfam: PF08276 IPR013227
|
361-427 | PAN_2 PAN-2 domain
|
CDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDI |
| ProfileScan: PS50948 IPR003609
|
361-442 | PAN Apple-like
|
CDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVA |
| HMMSmart: SM00473 IPR003609
|
362-441 | divergent subfamily of APPLE domains Apple-like
|
DGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRV |
| Seg: seg | 451-474 | seg | IKSKKIIGSSIGVSILLLLSFIIF |
| HMMPfam: PF12398 IPR022126
|
488-529 | DUF3660 S-locus, receptor kinase
|
QTPIVDLVRSQDSLMNELVKASRSYTSKENKTDYLELPLMEW |
| superfamily: SSF56112 IPR011009
|
525-845 | Protein kinase-like (PK-like) Protein kinase-like domain
|
PLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQ |
| Gene3D: G3DSA:3.30.200.20 | 526-613 | no description | LMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYE |
| ProfileScan: PS50011 IPR000719
|
539-829 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGF |
| HMMSmart: SM00219 IPR020635
|
539-814 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVML |
| HMMSmart: SM00220 IPR002290
|
539-812 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMV |
| HMMPfam: PF07714 IPR001245
|
541-812 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
TDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEXLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMV |
| PatternScan: PS00107 IPR017441
|
545-567 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGQGGFGIVYKGMLLDGKEIAVK |
| Gene3D: G3DSA:1.10.510.10 | 616-814 | no description | ENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVML |
| PatternScan: PS00108 IPR008271
|
660-672 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDLKASNVLL |
| HMMPfam: PF11883 IPR021820
|
816-863 | DUF3403 S-locus receptor kinase, C-terminal
|
SETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR |
List of Contributions
There has not been any contribution yet.
