PRGDB00065843 (At.318)
| At.318 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 20856746 (AY102113) |
| Gene Class | RLK |
| Domain Type | Ser-Thr Kinase, Receptor-Like Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
CTTGTTTGATAATCCATCTTTTACGTTTACAATCAGAAATATCTAAAGACAAAACACACACAACCACAATGTAGTCTATTTGTTCCTACCCTTAAAAGTCTCTGTTGGCTTTTCAAAACCTGGTCCATTGAGTCATTGACTCAGAGAGTTAGAACTAAAAAGTCTTTATATTTACACATATACGCAGATTTAATCTCTACATCTTTGCTTCAGTAAAATGGGTTCTCTTTCTTGTTCAATAATCCATCTGGTTCTTATTCTGCAACTACAAACAtttttcgttttttCTCAAAACATCAGAAACGGCTCTGTTCCTGTCGGAGAATCTCTCACCGCTTCAGAGTCCCAACAAATCTCTAGTTCATGGCGTTCACCTTCCGGTGACTTTGCTTTCGGGTTCCGCAAGATCCAACCAAACGACGGTTTCACTCTCTCCATTTGGTTCGACAAGATTTCTGACAAGACCATCGTGTGGCACGCACAAGCCGTCAACACAACCACCGGTCTTGTCCCTAATGGTTCGAAGGTTACATTAACTGCAGATGGCGGTCTGGTTATCGCTGACCCTCGAGGTCAGGAGCTGTGGAGAGCGTTGAGTGGTGGCTCTGTTTCTCGAGGGCGATTTACTGACGACGGAAACTTCGTTCTTTTCAGAGATGGGTCAGAAGATTCTGACGAGGTTCTATGGTCGAGCTTTGAAAATCCCACCGACACTCTGTTACCTAATCAGAATATAGAAGTTGGAAGGAATCTGTCATCACGTAGGACAGAGACGAGCTTCAAAAAAGGAAGATTCAGCCTACGTCTAGAGGATGACGGAAATCTTCAGCTTCACTCTCTCAACGCCGAGACTGCCTCAGAATCAGACATATACTCTCAGTACTACGAAAGTAATACCAACGATCCAAACAACCCCGGGATTCAATTAGTTTTCAACCAGTCAGGGGAAATATATGTTCTTCAAAGGAACAATTCAAGATTCGTCGTCAAAGATAGAGATCCGGATTTTTCTATCGCCGCGCCGTTCTACATTTCGACGGGGTTTTTGCTGAGTACTATCATCCCAAAGGAGGCCAGGAGAATAGTGGGTGGGTGTTTGCTTGGGCTGTGCCGGATAATATGTGTAGCCCCGATGATGCACTTGGGAATATGGCTTGTGGGTATAATAATATATGTAGTTTAGGAAACAACAAGAGGCCAAAATGTGAGTGTCCTGAGAGGTTTGTGTTAAAGGATCCGAGCAATGAGTATGGTGATTGTTTGCCAGATTTTGAGATGCAGACTTGTAGACCAGAGAACCAAACCGCAAACTCAGATGTGAATCTTTACGAGTTCATTACTTTAGAGAAGACGAATTGGCCGTTTGGGGATTATGAGAGTTATGCCAACTATGATGAAGAAAGATGTAAAGCTTCTTGTCTTAGCGATTGTTTATGTGCTGCGGTTATTTTTGGAACAAATCGGGATCTAAAATGTTGGAAGAAGAAGTTTCCCTTGTCTCACGGTGAAAGATCTCCACGTGGTGATAGTGATACATTCATTAAGGTTCGAAACCGCTCCATCGCGGATGTTCCAGTTACCGGAAACAGAGCGAAAAAACTTGACTGGTTAATCATTGCTTGTTCTGTTCTACTTGGAACTTCAGCTTTTGTGATTTTTGATACTTCTTGCTCTTTATAGAAAGACTAAGAAGAGTAAAAATATGATGAAGAATCAAGCGAGAGATATCGGTCGGACTACAGCTACAACTACTGCAAATGAGTTGAATTTGAGGGTCTTTACATATGGAGAGCTTGCAGAGGCTACAAGAGATTTCACGGAAGAGCTTGGAAGAGGAGCCTTTGGTATAGTTTACAAAGGATATTTAGAAGTTGCCGGTGGTTCTGAAGTTACCGTGGCTGTGAAGAAACTAGATCGTCTTGATTTAGATAACGAAAAAGAGTTCAAGAATGAGGTTAAAGTGATAGGTCAGATTCACCACAAGAACCTAGTGAGGCTCATTGGCTTCTGCAACGAAGGACAGAGCCAGATGATCGTCTATGAGTTTTTACCACAAGGGACGCTAGCCAATTTTCTCTTCAGGCGTCCGAGGCCGAGCTGGGAAGATAGAAAGAATATTGCGGTGGCCATTGCTCGTGGAATCTTGTATCTACATGAAGAGTGCAGCGAGCAGATCATACACTGTGACATAAAACCGCAGAACATACTCCTAGATGAGTATTACACTCCTCGGATCTCGGATTTTGGTCTAGCAAAGCTTTTGTTGATGAACCAAACGTATACGCTCACTAACATCCGTGGAACAAAAGGGTATGTGGCCCCTGAATGGTTCAGGAATAGCCCCATTACATCCAAAGTAGATGTTTATAGCTATGGAGTAATGCTTTTAGAAATCGTGTGCTGCAAGAAAGCCGTCGACCTTGAGGATAACGTGATTCTCATCAATTGGGCTTACGATTGTTTTCGACAAGGAAGGTTGGAAGATCTGACTGAGGACGATTCAGAGGCAATGAATGACATGGAAACTGTGGAGAGATATGTGAAAATAGCGATATGGTGTATACAAGAAGAGCATGGGATGAGACCTAACATGAGAAATGTTACACAGATGCTTGAAGGTGTGATTCAAGTTTTTGATCCTCCAAATCCGTCTCCTTATAGCACTTTCACTTGGTCTGATGAATCTTTGTCTAGTGATCCAGTGTCACTTGTTTGATAAGTTGATaaaaaaacaaaaTAAAGTTATTATACTTTTGTATGGAATAAACTCCAATCATTAATATTACGTTAAATAATCACACCTTTTTTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.318 | translated coding region predicted by ESTScan from UniGene At.318 | MGSLSCSIIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETSFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPNNPGIQLVFNQSGEIYVLQRNNSRFVVKDRDPDFSIAXAVLHFDGVFAEYYHPKGGQENSGWVFAWAVPDNMCSPDDALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEMQTCRPENQTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDCLCAAVIFGTNRDLKCWKKKFPLSHGERSPRGDSDTFIKVRNRSIADVPVTGNRAKKLDWLIIACSVLLGTSAFVIFDLLALYRKTKKSKNMMKNQARDIGRTTATTTANELNLRVFTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPSPYSTFTWSDESLSSDPVSLV |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF815 | 1-822 | RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); CARBOHYDRATE BINDING / KINASE | MGSLSCSIIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETSFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPNNPGIQLVFNQSGEIYVLQRNNSRFVVKDRDPDFSIAXAVLHFDGVFAEYYHPKGGQENSGWVFAWAVPDNMCSPDDALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEMQTCRPENQTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDCLCAAVIFGTNRDLKCWKKKFPLSHGERSPRGDSDTFIKVRNRSIADVPVTGNRAKKLDWLIIACSVLLGTSAFVIFDLLALYRKTKKSKNMMKNQARDIGRTTATTTANELNLRVFTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPSPYSTFTWSDE |
| HMMPanther: PTHR24420 | 1-822 | FAMILY NOT NAMED,FAMILY NOT NAMED | MGSLSCSIIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETSFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPNNPGIQLVFNQSGEIYVLQRNNSRFVVKDRDPDFSIAXAVLHFDGVFAEYYHPKGGQENSGWVFAWAVPDNMCSPDDALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEMQTCRPENQTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDCLCAAVIFGTNRDLKCWKKKFPLSHGERSPRGDSDTFIKVRNRSIADVPVTGNRAKKLDWLIIACSVLLGTSAFVIFDLLALYRKTKKSKNMMKNQARDIGRTTATTTANELNLRVFTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPSPYSTFTWSDE |
| Seg: seg | 37-54 | seg | SLTASESQQISSSWRSPS |
| ProfileScan: PS50927 IPR001480
|
37-157 | BULB_LECTIN Bulb-type lectin domain
|
SLTASESQQISSSWRSPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLW |
| HMMSmart: SM00108 IPR001480
|
37-163 | Bulb-type mannose-specific lectin Bulb-type lectin domain
|
SLTASESQQISSSWRSPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENP |
| superfamily: SSF51110 IPR001480
|
66-206 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
PNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETSFKKGRFSLRLEDDGNLQLH |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
70-206 | no description Bulb-type lectin domain
|
FTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETSFKKGRFSLRLEDDGNLQLH |
| HMMPfam: PF01453 IPR001480
|
82-186 | B_lectin Bulb-type lectin domain
|
KTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTET |
| superfamily: SSF56112 IPR011009
|
505-822 | Protein kinase-like (PK-like) Protein kinase-like domain
|
GRTTATTTANELNLRVFTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPSPYSTFTWSDE |
| Seg: seg | 507-513 | seg | TTATTTA |
| Gene3D: G3DSA:3.30.200.20 | 514-596 | no description | NELNLRVFTYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIG |
| ProfileScan: PS50011 IPR000719
|
531-803 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
RDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVI |
| HMMSmart: SM00219 IPR020635
|
531-799 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
RDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQML |
| HMMSmart: SM00220 IPR002290
|
531-806 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
RDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVF |
| HMMPfam: PF00069 IPR017442
|
534-796 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
TEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVT |
| PatternScan: PS00107 IPR017441
|
537-564 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGRGAFGIVYKGYLEVAGGSEVTVAVKK |
| Gene3D: G3DSA:1.10.510.10 | 597-796 | no description | FCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVT |
| PatternScan: PS00108 IPR008271
|
653-665 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHCDIKPQNILL |
List of Contributions
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