PRGDB00065844 (At.319)
| At.319 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 240255700 (NM_116257) |
| Gene Class | RLK |
| Domain Type | Ser-Thr Kinase, Receptor-Like Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATCTTGCAAAAATTCTCTCCACATTTCAAACGTCTAATAGTTAAAGAGAGCTTTTGTTTTTTCTTTCCCATGTCTATCAGTATCACCACCGAGAAAATATCATCAACACCACCAACCAAACATTAACCCACCCGAGAGTACCCAATGCCATGTACTACTTAtcttcctcttcttcttctcctcttccttcttcCACCACCATCTGTACAAAGCAAAGTTATCATCAAAGGAAACCAAACCATTCTGAGTTTCAAAGCTATTTTCCGGCTTGGTTTCTTCAGCACCACCAATGGTTCCTCCAATTGGTACTTGGGTATCTCTTACGCTTCTATGCCAACTCCCACCCACGTTTGGGTCGCCAATCGAATCCGACCCGTTTCGGATCCTGACTCTTCCACTCTCGAGCTCACCTCCACCGGATACCTAATCGTCAGTAACCTCCGTGACGGCGTCGTTTGGCAGACGGATAACAAACAACCCGGAACCGATTTCCGGTTCTCTGAAACCGGGAATCTGATTTTGATCAACGACGACGGTTCTCCGGTTTGGCAGAGCTTTGACAATCCGACTGACACGTGGCTTCCGGGGATGAATGTCACCGGTCTAACAGCTATGACTTCGTGGCGGAGTCTCTTCGATCCTTCGCCGGGGTTTTACTCTCTGAGACTGAGTCCAAGCTTCAACGAGTTCCAGCTTGTTTACAAAGGAACCACACCGTATTGGTCCACCGGAAATTGGACCGGAGAAGCCTTCGTCGGCGTTCCGGAAATGACCATTCCTTACATCTACAGGTTCCATTTCGTTAACCCTTACACTCCCACGGCGTCGTTTTGGTACATCGTCCCACCGTTGGACTCCGTTTCCGAGCCACGGCTGACGCGGTTCATGGTCGGCGCCAACGGCCAGCTGAAGCAGTACACTTGGGATCCACAGACGCAGAGCTGGAACATGTTCTGGTTGCAGCCGGAGGATCCTTGCCGCGTTTACAATCTCTGTGGTCAATTAGGGTTTTGTAGCAGCGAATTGCTCAAGCCCTGTGCTTGCATCCGCGGTTTCCGGCCTAGGAACGACGCCGCGTGGAGATCTGATGATTACAGCGACGGATGCCGCCGTGAAAACGGTGATTCCGGCGAAAAGAGTGATACTTTTGAAGCCGTTGGTGATCTACGCTACGATGGTGATGTGAAGATGTCACGGTTGCAGGTAAGCAAGAGCTCTTGCGCCAAAACTTGCTTAGGAAACTCTTCTTGTGTTGGTTTTTATCATAAGGAGAAGTCTAATCTCTGCAAAATTTTACTCGAGTCGCCGAATAATCTGAAGAATTCGAGCTCGTGGACTGGAGTTAGTGAAGATGTATTGTATATCAGAGAACCAAAGAAAGGGAATTCAAAGGGAAACATCTCTAAGTCTATAATTATATTGTGCAGCGTTGTTGGGTCAATCTCAGTTCTTGGGTTTACATTGTTAGTGCCATTGATTCTGTTGAAGAGGAGTCGAAAGAGGAAGAAGACTAGGAAACAAGACGAAGATGGGTTTGCTGTGTTGAATCTTAAGGTATTTTCTTTCAAGGAGCTTCAATCAGCTACCAATGGGTTCTCGGATAAGGTCGGACACGGCGGTTTTGGGGCGGTGTTTAAGGGAACATTACCGGGTTCTTCTACATTCGTGGCTGTGAAACGCTTAGAAAGACCTGGAAGCGGGGAGAGTGAGTTCCGGGCAGAGGTATGCACCATTGGGAACATTCAACATGTCAATCTCGTTAGGCTTAGAGGTTTCTGTTCAGAGAATCTTCATAGGCTTCTTGTCTATGATTACATGCCACAAGGATCCTTGAGTTCCTATCTGTCTAGAACAAGCCCCAAATTGCTAAGCTGGGAGACCCGTTTCAGGATCGCGTTAGGTACTGCCAAAGGGATCGCGTACTTGCATGAAGGATGCAGGGACTGTATTATACACTGTGATATCAAACCGGAGAACATTCTTTTGGACAGTGATTACAACGCCAAAGTGTCTGATTTTGGCTTGGCTAAGCTCCTTGGACGTGACTTCAGCAGAGTTCTAGCCACGATGAGAGGGACATGGGGCTACGTGGCTCCCGAATGGATATCTGGTTTGCCCATCACGACAAAAGCTGATGTGTATAGCTTTGGAATGACATTGCTCGAGCTGATCGGTGGTAGAAGAAATGTCATTGTTAATAGCGATACACTGGGAGAGAAAGAGACAGAACCAGAGAAATGGTTCTTTCCGCCATGGGCAGCGCGTGAGATCATACAAGGCAATGTGGACTCTGTGGTTGACTCTAGACTCAACGGAGAATATAACACTGAAGAGGTGACGAGGATGGCAACGGTGGCGATATGGTGCATACAAGACAATGAAGAGATAAGGCCAGCAATGGGAACGGTAGTGAAGATGCTTGAAGGAGTTGTGGAGGTGACGGTTCCTCCACCGCCTAAATTAATACAAGCTCTTGTCTCCGGCGATTCATACCGAGGAGTGAGCGGCACAAGCTGTAGTGAAGGCCATGGCTGTTCGGATCTCAATACAGGTTTGTCTAGCCCTGGCTCACGGTCGTCTTTTGGTAGACCTTCTCCTTGATCAATTTTGTAAGGTGATTTGGTCAAAACCAGCCTTAAATGTTTTAAGTGTTGCTCTCTAAGAGGGTTTAATTAGTTTAAACTGTATTTGTTGGTTGTATGATATTTGACTTAATCGACATTAACAGTTAAAACCATGGATTATGTCTTTCTTCTTAGTTTGAAAGTTCTTGTCACTTTGATAATCTTCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.319 | translated coding region predicted by ESTScan from UniGene At.319 | MPCTTYLPLLLLLFLLPPPSVQSKVIIKGNQTILSFKAIFRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMTSWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTPYWSTGNWTGEAFVGVPEMTIPYIYRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFMVGANGQLKQYTWDPQTQSWNMFWLQPEDPCRVYNLCGQLGFCSSELLKPCACIRGFRPRNDAAWRSDDYSDGCRRENGDSGEKSDTFEAVGDLRYDGDVKMSRLQVSKSSCAKTCLGNSSCVGFYHKEKSNLCKILLESPNNLKNSSSWTGVSEDVLYIREPKKGNSKGNISKSIIILCSVVGSISVLGFTLLVPLILLKRSRKRKKTRKQDEDGFAVLNLKVFSFKELQSATNGFSDKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEGVVEVTVPPPPKLIQALVSGDSYRGVSGTSCSEGHGCSDLNTGLSSPGSRSSFGRPSP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 7-19 | seg | LPLLLLLFLLPPP |
| ProfileScan: PS50927 IPR001480
|
18-139 | BULB_LECTIN Bulb-type lectin domain
|
PPSVQSKVIIKGNQTILSFKAIFRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFD |
| HMMSmart: SM00108 IPR001480
|
24-141 | Bulb-type mannose-specific lectin Bulb-type lectin domain
|
KVIIKGNQTILSFKAIFRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNP |
| HMMPanther: PTHR11795:SF54 | 25-408 | RLK4 (RECEPTOR-LIKE PROTEIN KINASE 4); SUGAR BINDING | VIIKGNQTILSFKAIFRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMTSWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTPYWSTGNWTGEAFVGVPEMTIPYIYRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFMVGANGQLKQYTWDPQTQSWNMFWLQPEDPCRVYNLCGQLGFCSSELLKPCACIRGFRPRNDAAWRSDDYSDGCRRENGDSGEKSDTFEAVGDLRYDGDVKMSRLQVSKSSCAKTCLGNSSCVGFYHKEKSNLCKILLESPNNLKNSSSWTGVSEDVLYIR |
| HMMPanther: PTHR11795 | 25-408 | FAMILY NOT NAMED,UNCHARACTERIZED | VIIKGNQTILSFKAIFRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMTSWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTPYWSTGNWTGEAFVGVPEMTIPYIYRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFMVGANGQLKQYTWDPQTQSWNMFWLQPEDPCRVYNLCGQLGFCSSELLKPCACIRGFRPRNDAAWRSDDYSDGCRRENGDSGEKSDTFEAVGDLRYDGDVKMSRLQVSKSSCAKTCLGNSSCVGFYHKEKSNLCKILLESPNNLKNSSSWTGVSEDVLYIR |
| superfamily: SSF51110 IPR001480
|
53-199 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
NWYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMTSWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTPYWSTGNWT |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
54-198 | no description Bulb-type lectin domain
|
WYLGISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMTSWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTPYWSTGNW |
| HMMPfam: PF01453 IPR001480
|
67-167 | B_lectin Bulb-type lectin domain
|
THVWVANRIRPVSDPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAMTSWRSLFDPS |
| HMMPfam: PF00954 IPR000858
|
193-308 | S_locus_glycop S-locus glycoprotein
|
WSTGNWTGEAFVGVPEMTIPYIYRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFMVGANGQLKQYTWDPQTQSWNMFWLQPEDPCRVYNLCGQLGFCSSELLKPCACIRGFRPRN |
| Gene3D: G3DSA:2.60.120.200 IPR013320
|
407-500 | no description Concanavalin A-like lectin/glucanase, subgroup
|
IREPKKGNSKGNISKSIIILCSVVGSISVLGFTLLVPLILLKRSRKRKKTRKQDEDGFAVLNLKVFSFKELQSATNGFSDKVGHGGFGAVFKGT |
| Seg: seg | 411-425 | seg | KKGNSKGNISKSIII |
| Seg: seg | 448-458 | seg | KRSRKRKKTRK |
| superfamily: SSF56112 IPR011009
|
470-790 | Protein kinase-like (PK-like) Protein kinase-like domain
|
KVFSFKELQSATNGFSDKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEGVVEVTVPPPPKLIQALVSGDSYRGVSGTS |
| ProfileScan: PS50011 IPR000719
|
482-763 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
NGFSDKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEGVV |
| HMMSmart: SM00220 IPR002290
|
482-739 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
NGFSDKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAI |
| HMMSmart: SM00219 IPR020635
|
484-759 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSDKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKML |
| HMMPfam: PF00069 IPR017442
|
486-682 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
DKVGHGGFGAVFKGTLPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNV |
| PatternScan: PS00107 IPR017441
|
488-511 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
VGHGGFGAVFKGTLPGSSTFVAVK |
| Gene3D: G3DSA:3.30.200.20 | 501-559 | no description | LPGSSTFVAVKRLERPGSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMP |
| Gene3D: G3DSA:1.10.510.10 | 561-761 | no description | GSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEG |
| PatternScan: PS00108 IPR008271
|
602-614 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHCDIKPENILL |
| Seg: seg | 762-771 | seg | VVEVTVPPPP |
| Seg: seg | 805-818 | seg | SSPGSRSSFGRPSP |
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