PRGDB00065889 (At.5038)
| At.5038 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 9280635 (AF286050) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
GATGGAGAACAAACCAAGTGTATTAACTGAAAGATATGAAGTTGGGAGGTTATTGGGTCAAGGTACTTTTGCTAAAGTGTATTCTGGAAGGAGTAATCATACCAACGAGAGTGTAGCTATCAAGATGATTGACAAGGACAAAGTTATGAGAGTCGGGCTTAGCCAGCAAATCAAGCGAGAGATCTCTGTAATGAGGATCGCTAAACACCCGAATGTCGTTGAGTTATACGAGGTTATGGCTACAAAGTCAAGGATTTACTTTGTTATTGAGTATTGTAAAGGTGGTGAGCTTTTCAACAAGGTTGCAAAAGGAAAACTTAAAGAAGATGTTGCTTGGAAGTATTTTTATCAGCTTATTAGTGCGGTTGATTTTTGTCACAGCCGCGGAGTTTATCACCGCGACATTAAGCCGGAAAATCTTTTGTTGGATGACAATGATAATCTTAAGGTATCTGATTTTGGTTTAAGTGCGCTTGCTGATTGCAAGCGGCAAGATGGTCTTCTACATACAACTTGTGGTACACCTGCTTATGTTGCGCCCGAGGTTATTAACCGAAAAGGATACGAGGGTACGAAAGCGGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTCTTTTGGCTGGTTATCTCCCTTTCCATGACACTAATCTTATGGAGATGTATAGGAAGATAGGTAAAGCAGACTTCAAGTGTCCCAGCTGGTTTGCTCCTGAGGTAAAGAGACTATTGTGTAAGATGTTGGACCCTAACCATGAGACTAGAATCACTATTGCAAAAATCAAGGAGAGTTCTTGGTTCAGAAAGGGTTTGCATTTGAAGCAAAAAAAGATGGAAAAGATGGAGAAACAACAAGTCAGAGAGGCTACTAATCCCATGGAAGCTGGAGGTTCAGGCCAAAATGAAAACGGAGAAAACCACGAGCCGCCTCGACTTGCTACCTTGAATGCTTTCGATATCATCGCCTTGTCTACGGGGTTTGGTCTGGCAGGACTTTTTGGGGATGTATATGACAAGCGAGAATCTAGGTTCGCGTCGCAAAAACCTGCTTCAGAGATCATTTCTAAGCTAGTAGAGGTTGCCAAGTGCCTGAAGCTGAAGATAAGAAAGCAAGGCGCAGGCTTGTTCAAACTGGAAAGAGTAAAGGAAGGAAAAAACGGAATTTTGACGATGGATGCAGAGATATTCCAAGTGACGCCGACGTTTCACCTGGTGGAAGTGAAGAAATGTAATGGAGATACAATGGAGTATCAGAAGTTAGTGGAGGAGGATCTTAGGCCTGCTTTGGCAGATATTGTTTGGGTTTGGCAAGGCGAGAAGGAGAAAGAGGAGCAGTTACTGCAGGATGAACAAGGAGAGCAAGAACCATCATAGCAAGTTCAGCTACAAGCCTACAACTGCAAGCACATGAATTGTTGCAGGAACATGAAAATGGTAACCCTCTTGCGACTTCAGCTGAAACAGAAGCAAGCATCAAGAAACTCTAACGAAAACAGAGGAAGGAAAACAATAACAATTGCACAAAATGGATTCTTTTTGCATATAGACTACAAAAATTGTAGATAGTTGATTGATTTGTAACAACTACGAGCttttttttttACCTTGCCTCTTGTGAAGTTTTGAACGTATATTGTTTCATGAGTACAGTAATTGAATTTCTTTAAGAGTTTGGTCGATACATaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.5038 | translated coding region predicted by ESTScan from UniGene At.5038 | XMENKPSVLTERYEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREATNPMEAGGSGQNENGENHEPPRLATLNAFDIIALSTGFGLAGLFGDVYDKRESRFASQKPASEIISKLVEVAKCLKLKIRKQGAGLFKLERVKEGKNGILTMDAEIFQVTPTFHLVEVKKCNGDTMEYQKLVEEDLRPALADIVWVWQGEKEKEEQLLQDEQGEQEPSXASSATSLQLQAHELLQEHENGNPLATSAETEASIKKL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24343:SF45 | 2-294 | SUBFAMILY NOT NAMED,SERINE/THREONINE-PROTEIN KINASE PTK1 | MENKPSVLTERYEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREATNPME |
| HMMPanther: PTHR24343 | 2-294 | FAMILY NOT NAMED,SERINE/THREONINE KINASE | MENKPSVLTERYEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREATNPME |
| Gene3D: G3DSA:3.30.200.20 | 4-109 | no description | NKPSVLTERYEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKE |
| superfamily: SSF56112 IPR011009
|
8-298 | Protein kinase-like (PK-like) Protein kinase-like domain
|
VLTERYEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREATNPMEAGGS |
| ProfileScan: PS50011 IPR000719
|
13-267 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWF |
| HMMPfam: PF00069 IPR017442
|
13-267 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
YEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWF |
| HMMSmart: SM00219 IPR020635
|
13-267 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWF |
| HMMSmart: SM00220 IPR002290
|
13-267 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YEVGRLLGQGTFAKVYSGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWF |
| PatternScan: PS00107 IPR017441
|
19-42 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGQGTFAKVYSGRSNHTNESVAIK |
| Gene3D: G3DSA:1.10.510.10 | 110-304 | no description | DVAWKYFYQLISAVDFCHSRGVYHRDIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSCGVVLFVLLAGYLPFHDTNLMEMYRKIGKADFKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREATNPMEAGGSGQNENG |
| PatternScan: PS00108 IPR008271
|
131-143 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VYHRDIKPENLLL |
| Seg: seg | 140-149 | seg | NLLLDDNDNL |
| Seg: seg | 274-285 | seg | KQKKMEKMEKQQ |
| ProfileScan: PS50816 IPR018451
|
310-334 | NAF NAF/FISL domain
|
PRLATLNAFDIIALSTGFGLAGLFG |
| HMMPfam: PF03822 IPR004041
|
313-370 | NAF NAF domain
|
ATLNAFDIIALSTGFGLAGLFGDVYDKRESRFASQKPASEIISKLVEVAKCLKLKIRK |
| Seg: seg | 437-455 | seg | QGEKEKEEQLLQDEQGEQE |
| Seg: seg | 457-477 | seg | SXASSATSLQLQAHELLQEHE |
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