PRGDB00065903 (At.7703)

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At.7703
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 62320367 (AK221510)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Arabidopsis thaliana

Comment?

Arabidopsis thaliana mRNA for CBL-interacting protein kinase 20, complete cds, clone: RAFL07-58-I22

DNA Sequence

GAAGAAAAAATATAATTGATATTTTCAAAATTTGAGCTCCATCTCTTCTAAGCCATGGGAAACACATTCCAAGACGAAGTTAATCAATAGTTCATCCTCTGCTTTTTCATCAAGTTCCTTTGTTCCCTCAAAAGCGTCAATAAATGGATAAAAACGGCATAGTTTTGATGCGAAAATATGAATTAGGTCGTCTTCTAGGTCAAGGCACATTCGCAAAAGTGTACCACGCACGCAACATAAAAACAGGAGAAAGCGTAGCGATCAAGGTGATCGACAAACAGAAAGTTGCGAAAGTCGGATTAATCGATCAAATCAAACGAGAAATATCAGTGATGCGTCTCGTTCGTCACCCCCACGTCGTCTTCCTCCATGAAGTAATGGCGAGCAAGACAAAGATCTATTTCGCTATGGAATACGTTAAAGGCGGTGAGCTTTTTGATAAAGTCTCTAAAGGAAAGCTTAAAGAAAACATTGCTCGAAAATATTTCCAGCAATTGATCGGAGCAATCGATTATTGCCATAGCCGCGGAGTTTACCACCGCGATCTCAAACCGGAGAATCTTCTTCTAGACGAAAACGGCGATTTGAAAATATCGGATTTTGGCCTTAGCGCGTTGAGGGAGTCGAAGCAGCAAGATGGCTTGCTTCACACGACATGTGGAACACCTGCTTACGTGGCACCTGAAGTGATAGGCAAGAAAGGTTATGATGGAGCTAAAGCCGATGTTTGGTCTTGCGGGGTTGTGTTGTACGTGCTATTGGCTGGATTTCTTCCGTTTCACGAGCAAAATCTTGTGGAAATGTATCGGAAAATCACGAAAGGCGAATTCAAATGTCCGAATTGGTTTCCTCCCGAGGTCAAGAAGTTGTTGTCTCGGATTCTTGACCCTAACCCTAATTCAAGAATCAAGATTGAAAAAATCATGGAGAATTCCTGGTTTCAAAAGGGTTTCAAGAAGATCGAAACGCCTAAATCTCCCGAAAGTCATCAGATCGACTCACTGATCAGCGATGTCCACGCAGCTTTTTCCGTAAAACCGATGTCTTACAACGCGTTTGACTTGATCTCTTCGCTGTCTCAAGGATTCGATCTCTCGGGTTTGTTTGAGAAAGAAGAGAGATCAGAATCGAAGTTTACAACGAAGAAAGATGCAAAAGAGATAGTGTCGAAATTCGAGGAGATAGCAACAAGTAGTGAGAGATTCAATTTGACGAAGAGCGATGTAGGAGTGAAGATGGAAGATAAGAGAGAAGGAAGAAAAGGACATCTTGCGATTGATGTTGAGATATTTGAAGTGACAAATAGTTTTCATATGGTTGAGTTTAAGAAAAGTGGAGGTGATACAATGGAGTATAAGCAATTTTGTGATCGTGAGCTTAGGCCTTCTTTGAAAGATATTGTTTGGAAATGGCAAGGAAACAACAACAATAGCAACAATGAGAAGATTGAAGTGATACATTAAATGTGTTTTTCATCTTATATTTTTCTGGATTTGGTTGTTTTTCTTTAGATCTCCGTGTAAAAGATGAGATTTATGATAATGGCTGCAATCATCATCACaaaaaaaa


Protein sequences

Name Description Sequence
At.7703 translated coding region predicted by ESTScan from UniGene At.7703

MDKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKIETPKSPESHQIDSLISDVHAAFSVKPMSYNAFDLISSLSQGFDLSGLFEKEERSESKFTTKKDAKEIVSKFEEIATSSERFNLTKSDVGVKMEDKREGRKGHLAIDVEIFEVTNSFHMVEFKKSGGDTMEYKQFCDRELRPSLKDIVWKWQGNNNNSNNEKIEVIH

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
1-326 Kinase_like
Protein kinase-like domain

MDKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKIETPKSPESHQIDSLISDVHAAFSVKPMSYNAFDLISSLSQGFDLSGLFEKEER

HMMPanther: PTHR24343:SF45
1-273 PTHR24343:SF45,SERINE/THREONINE-PROTEIN KINASE PTK1

MDKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKI

HMMPanther: PTHR24343
1-273 PTHR24343,SERINE/THREONINE KINASE

MDKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKI

Gene3D: G3DSA:3.30.200.20
9-108 G3DSA:3.30.200.20

MRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKE

HMMPfam: PF00069
IPR017442
12-266 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

YELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWF

ProfileScan: PS50011
IPR000719
12-266 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

YELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWF

HMMSmart: SM00220
IPR002290
12-266 S_TKc
Serine/threonine-protein kinase domain

YELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWF

PatternScan: PS00107
IPR017441
18-41 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

LGQGTFAKVYHARNIKTGESVAIK

Gene3D: G3DSA:1.10.510.10
109-284 G3DSA:1.10.510.10

NIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKIETPKSPESHQI

PatternScan: PS00108
IPR008271
130-142 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VYHRDLKPENLLL

ProfileScan: PS50816
IPR018451
297-322 NAF
NAF/FISL domain

VKPMSYNAFDLISSLSQGFDLSGLFE

HMMPfam: PF03822
IPR004041
298-358 NAF
NAF domain

KPMSYNAFDLISSLSQGFDLSGLFEKEERSESKFTTKKDAKEIVSKFEEIATSSERFNLTK






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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