PRGDB00065909 (At.8519)
| At.8519 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 42458657 (BX830235) |
| Gene Class | RLP |
| Domain Type | Ser-Thr Kinase, LRR, Receptor-Like Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AATACATCAAATGAGAGGTTTGGTTCATGTTTTATTAATCAATCCGAATAACATTACATATTTGTCTATATTATTGACTCAAATATATTTTTTCGTAATCCTAGAGATAAGCTTGGTTTACTTGCAAATTTCAAGAGGAGCACCACACAAACACTTGTTGTAAAAATAGGAATAAGAATCAAATGTCTGAAGTTTCCCTCCAGTTGGGATGTGTCCACACAGTTTGTTGTAGCTAACATTGAAGAACTGAAGAGGAGCTTCAGTCCGCTGCACCGGAATATTCCCAGTTATCCCATTGTGGTTCAAGTCCAAGATACCAAGTGTTTTAGGGATATCAACCTTTGAGATATCGAACTGGAACATGTTTCTTGATAAGTCAATAGACCAGGTTGTTTTGTTGGAACCAAACAACATCGAAGCATCACCTTGGAGCTTGTTGCGGGATAAATCGATCCGGTTAAAGTCGATGTTGCCTAATGATTTGGGTATTGGACCGGAGAGCTGGTTATGTTAAAAGCGAAGGTCAGGGACTGTTCCTGGAAACGACCCAAATGACTCTTGTATGGAACCTACAACATAAAGATCGTTGTTTAGACAAGACACTTAATGATGTAATAAAGGAAAAGATCGTTCTTTACCTGTAAGTTTGTTCCTGCTAAGTTCAAGAGCCAAGATTTTAGGTAACGTAGAGAGAGAACTTGGAATGGAACCAGAAAGATCATTGAAGGAAAGTTCTAAGAACTCGAGATTCTTGAGCTGACTTATAAAGTCAGGAATTGGACCTTTAAGATTCGTCCAGCTGAGCCTGAGAATTCGGAGGTTCTTGAGTTTGGCGATGGTGGGTTGGATTGTACCGGTGAGGTTAGAGAGTTTGCGGAAAACAAGGTTCTCAAGATACGGCAAGTAACCAACTTCAGCCGGGATCTGACCGGAGTTCTGGCCGGAGAATATGGTTAAGGCGGTAACACGGTGGTTAAGGGTGGCGTCGCCGAACTCAAGGCAGTACCAGGAGCAACAGTCGGTTTGAGGGTCCCATGAAGCGAGGTGATAAGGGTTGTTTAGAGATTTCTTGATCTTGAGGAGGGTGTTTTTGTCATTTTGGTTACAGAGATCTTTAGACAAACAGGTCGTGAGGAATGTGAACAAGAACAAGAGACAAAATGTCGCTGTCTTATCCATGGTGTTGGTTTTGAATTTTGATGGAAAGTGTTAGTGATACATATACATACTATATAGTGAGTGATATAGACTTAAAGAGACGGATTCGATTTGATCTCTGTTTCCACATGGACCGTAATAATAGTCAATACATATCATATAGTCAAGATGTCGGCGTTGAATATGTTTGGGTAATGTAATTAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.8519 | translated coding region predicted by ESTScan from UniGene At.8519 | MDKTATFCLLFLFTFLTTCLSKDLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLEFGDATLNHRVTALTIFSGQNSGQIPAEVGYLPYLENLVFRKLSNLTGTIQPTIAKLKNLRILRLSWTNLKGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGKERSFPLLHHXVSCLNNDLYVVGSIQESFGSFPGTVPDLRFXHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQRTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYSYFYNKCLCGAPLEICK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-346 | FAMILY NOT NAMED,FAMILY NOT NAMED | MDKTATFCLLFLFTFLTTCLSKDLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLEFGDATLNHRVTALTIFSGQNSGQIPAEVGYLPYLENLVFRKLSNLTGTIQPTIAKLKNLRILRLSWTNLKGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGKERSFPLLHHXVSCLNNDLYVVGSIQESFGSFPGTVPDLRFXHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQRTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYSYFYNKCLCG |
| HMMPanther: PTHR24420:SF918 | 1-346 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); PROTEIN BINDING | MDKTATFCLLFLFTFLTTCLSKDLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLEFGDATLNHRVTALTIFSGQNSGQIPAEVGYLPYLENLVFRKLSNLTGTIQPTIAKLKNLRILRLSWTNLKGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGKERSFPLLHHXVSCLNNDLYVVGSIQESFGSFPGTVPDLRFXHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQRTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYSYFYNKCLCG |
| Seg: seg | 6-20 | seg | TFCLLFLFTFLTTCL |
| superfamily: SSF52058 | 23-353 | L domain-like,LRR | DLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLEFGDATLNHRVTALTIFSGQNSGQIPAEVGYLPYLENLVFRKLSNLTGTIQPTIAKLKNLRILRLSWTNLKGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGKERSFPLLHHXVSCLNNDLYVVGSIQESFGSFPGTVPDLRFXHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQRTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYSYFYNKCLCGAPLEICK |
| Gene3D: G3DSA:3.80.10.10 | 25-350 | no description | CNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLEFGDATLNHRVTALTIFSGQNSGQIPAEVGYLPYLENLVFRKLSNLTGTIQPTIAKLKNLRILRLSWTNLKGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGKERSFPLLHHXVSCLNNDLYVVGSIQESFGSFPGTVPDLRFXHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQRTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYSYFYNKCLCGAPLE |
| HMMPfam: PF08263 IPR013210
|
27-59 | LRRNT_2 Leucine-rich repeat-containing N-terminal domain,
|
QNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWY |
| HMMPfam: PF00560 IPR001611
|
144-166 | LRR_1 Leucine-rich repeat
|
NLEFLELSFNDLSGSIPSSLSTL |
List of Contributions
There has not been any contribution yet.
