PRGDB00065916 (At.9613)

At.9613
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	16649054 (AY059897)
Gene Class	RLP
Domain Type	LRR, Ser-Thr Kinase
Gene Species	Arabidopsis thaliana
	Comment?

Arabidopsis thaliana receptor protein kinase-like protein (At5g67200; K21H1.16) mRNA, complete cds

DNA Sequence

ACTaaaaaaaaatgacactgaacttttttcttcccttcttcttcttcttcattctCCTCCGTGTCTCCGCCGGAGCAGAGCCAAATTACTTCAACTCCTTACTTCCTTCCGACGCCGTTGCATTACTCTCTTTCAAATCCACCGCCGATCTCGACAACAAGCTCTTGTATTCACTCACCGAGCGTTACGACTACTGTCAATGGCGCGGCGTTAAATGTGCACAAGGACGCATCGTTCGTCTTGTTCTCTCCGGCGTTGGTCTCCGCGGCTACTTCTCTTCAGCTACTCTTAGCCGTCTTGACCAGCTCCGAGTTCTGAGTCTCGAGAATAACTCGCTCTTTGGTCCGATTCCTGATCTTTCACATCTCGTTAACCTCAAATCTCTCTTCCTTAGCCGGAATCAGTTTTCCGGTGCTTTCCCTCCGTCGATTCTCTCTCTGCACCGGTTAATGATTCTCTCTATATCCCACAACAACTTCTCCGGTTCGATTCCCTCTGAGATCAACGCACTTGACCGGTTAACTTCATTAAATCTCGACTTTAACCGGTTTAACGGAACTCTACCGTCGTTAAACCAGTCGTTTCTGACGTCATTCAACGTCTCCGGTAACAACCTCACCGGAGTAATCCCCGTTACTCCGACTCTATCACGTTTCGATGCGTCGTCGTTTAGGTCTAACCCTGGACTCTGCGGCGAGATCATTAACCGAGCTTGCGCTTCACGCTCGCCGTTCTTTGGCTCCACTAACAAAACGACGTCGTCAGAAGCTCCGTTAGGACAAAGCGCACAGGCGCAGAATGGTGGTGCGGTGGTTATCCCTCCGGTAGTTACGAAGAAGAAAGGTAAAGAAAGTGGATTAGTCCTTGGTTTCACCGCTGGTCTCGCTTCGCTTATAGTTCTTGGTCTTTGCCTCGTTGTGTTCTCTCTGGTGATAAAGAAACGAAACGACGATGGAATATATGAACCAAATCCAAAAGGAGAAGCTTCCTTATCTCAACAACAGCAATCACAAAACCAAACTCCAAGAACAAGAGCAGTTCCGGTTTTGAACTCAGATACCGAATCTCAAAAGCGAGAAAAAGAGGTTCAATTTCAAGAAACAGAGCAGCGAATACCAAATAGTGGGAATCTTGTTTTCTGTGGAGAATCTAGAAGTCAAGGAATGTACACAATGGAGCAGCTAATGAGAGCTTCAGCGGAGTTATTAGGAAGAGGATCAGTAGGGATTACGTATAAAGCGGTTCTTGATAATCAGCTTATTGTGACGGTGAAGAGACTAGACGCTGCTAAAACGGCAGTGACGAGTGAAGAAGCGTTTGAGAATCATATGGAGATTGTTGGTGGACTTAGACATACCAATCTTGTTCCGATTAGATCTTATTTTCAGTCCAACGGAGAGAGACTTATCATCTACGATTATCATCCTAATGGCAGCTTATTCAATCTCATTCACGGTTCAAGATCGTCAAGAGCAAAGCCATTACATTGGACATCATGTTTAAAGATTGCAGAAGATGTAGCTCAAGGCTTATATTACATCCACCAAACATCATCAGCATTAGTCCATGGAAACCTAAAATCCACAAACATTCTCTTAGGACAAGACTTTGAAGCCTGTTTAACAGATTACTGCCTCAGTGTCTTAACAGACTCTTCTTCTGCTTCACCTGATGATCCTGACTCATCCTCCTACAAAGCTCCTGAGATCAGAAAATCATCACGTAGACCAACTTCCAAATGTGATGTTTACTCGTTTGGTGTCTTGATCTTTGAGCTTTTGACTGGTAAGAATGCGTCAAGGCATCCGTTTATGGCGCCTCATGATATGCTTGATTGGGTTAGAGCAATGAGAGAAGAAGAAGAAGGAACAGAGGATAATAGGCTTGGGATGATGACTGAAACAGCTTGTCTTTGCCGTGTGACATCACCAGAGCAAAGACCAACGATGAGACAAGTGATTAAGATGATTCAGGAGATTAAGGAGAGTGTTATGGCTGAAGAAAACGATCCGTTCCGGTGAAAACGAAACTTCCTAGCTATCCTCCGAACAATTTTCCCAAGCGAGGGGGTTAATTTAGAGAAAGGAGAATATAGGGTGCGTGAATGTAATTTTGTTAGCATGTGGGGTTGGAATTGTAATACAGTTGGAATTTAGAGGACGAAAGTCAAAGAAGTTTGCTTTTTCTCT

Protein sequences

Name	Description	Sequence
At.9613	translated coding region predicted by ESTScan from UniGene At.9613	MTLNFFLPFFFFFILLRVSAGAEPNYFNSLLPSDAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVKCAQGRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIPDLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCGEIINRACASRSPFFGSTNKTTSSEAPLGQSAQAQNGGAVVIPPVVTKKKGKESGLVLGFTAGLASLIVLGLCLVVFSLVIKKRNDDGIYEPNPKGEASLSQQQQSQNQTPRTRAVPVLNSDTESQKREKEVQFQETEQRIPNSGNLVFCGESRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLDWVRAMREEEEGTEDNRLGMMTETACLCRVTSPEQRPTMRQVIKMIQEIKESVMAEENDPFR

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR24420	1-669	PTHR24420,FAMILY NOT NAMED	MTLNFFLPFFFFFILLRVSAGAEPNYFNSLLPSDAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVKCAQGRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIPDLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCGEIINRACASRSPFFGSTNKTTSSEAPLGQSAQAQNGGAVVIPPVVTKKKGKESGLVLGFTAGLASLIVLGLCLVVFSLVIKKRNDDGIYEPNPKGEASLSQQQQSQNQTPRTRAVPVLNSDTESQKREKEVQFQETEQRIPNSGNLVFCGESRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLDWVRAMREEEEGTEDNRLGMMTETACLCRVTSPEQRPTMRQVIKMIQEIKESVMAEENDPFR
superfamily: SSF52058	28-228	SSF52058,LRR	NSLLPSDAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVKCAQGRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIPDLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCG
Gene3D: G3DSA:3.80.10.10	32-207	G3DSA:3.80.10.10	PSDAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVKCAQGRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIPDLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIP
HMMPfam: PF00560 IPR001611	98-119	LRR_1 Leucine-rich repeat	QLRVLSLENNSLFGPIPDLSHL
HMMPfam: PF00560 IPR001611	121-141	LRR_1 Leucine-rich repeat	NLKSLFLSRNQFSGAFPPSIL
HMMPfam: PF00560 IPR001611	146-165	LRR_1 Leucine-rich repeat	LMILSISHNNFSGSIPSEIN
superfamily: SSF56112 IPR011009	380-668	Kinase_like Protein kinase-like domain	SRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLDWVRAMREEEEGTEDNRLGMMTETACLCRVTSPEQRPTMRQVIKMIQEIKESVMAEENDPF
ProfileScan: PS50011 IPR000719	393-669	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	RASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLDWVRAMREEEEGTEDNRLGMMTETACLCRVTSPEQRPTMRQVIKMIQEIKESVMAEENDPFR
Gene3D: G3DSA:3.30.200.20	397-470	G3DSA:3.30.200.20	ELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDY
HMMPfam: PF00069 IPR017442	397-651	Pkinase,Ser-thr Serine/threonine-protein kinase-like domain	ELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLDWVRAMREEEEGTEDNRLGMMTETACLCRVTSPEQRPTMRQVIK
Gene3D: G3DSA:1.10.510.10	471-661	G3DSA:1.10.510.10	HPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLDWVRAMREEEEGTEDNRLGMMTETACLCRVTSPEQRPTMRQVIKMIQEIKESVM

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Analyses

Blast

Blast matches against Reference R-Genes. Show