PRGDB00065919 (At.10473)
| At.10473 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 110737443 (AK228766) |
| Gene Class | Unknown |
| Domain Type | NBS |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ACACACATACACTTACATCTCCATCCTCTTGTcttaaaaagtttccaaaatctttcttttttcttcttctacattcttaaaatttcttctgttttcTCCTCACAACCAGACAAGCAAACTCTAAACTCTGTGGAAGATGTATGGAAATAATAACAAGAAGTCTATCAACATCACGAGTATGTTTCAAAACCTCATCCCCGAAGGCAGCGACATTTTCTCCCGGCGTTGCATCTGGGTCAATGGACCCGTCATCGTCGGAGCTGGCCCATCAGGTCTAGCCGTTGCTGCGGGCTTGAAACGTGAAGGGGTACCATTCATAATCCTCGAGCGAGCTAACTGCATTGCTTCATTATGGCAAAACAGAACCTACGATCGTCTCAAACTCCATCTACCTAAACAGTTTTGCCAATTACCCAATTATCCTTTCCCGGACGAGTTCCCTGAGTACCCTACCAAGTTTCAGTTTATTCAGTACCTTGAGTCCTACGCAGCCAACTTTGACATCAACCCTAAGTTCAACGAGACAGTCCAGTCCGCTAAATATGATGAGACGTTCGGGCTGTGGCGGGTTAAGACCATTTCAAACATGGGTCAGCTCGGTTCTTGCGAGTTTGAGTATATATGCAGATGGATTGTGGTGGCAACGGGAGAGAACGCTGAGAAAGTTGTGCCGGATTTTGAAGGTCTAGAGGATTTTGGCGGCGATGTTCTCCATGCTGGTGACTATAAATCCGGTGGAAGGTACCAAGGGAAAAAGGTTTTGGTGGTGGGATGTGGAAACTCCGGTATGGAAGTCTCTCTCGATCTCTACAATCACGGAGCAAACCCATCGATGGTCGTTCGTAGCGCTGTTCATGTTTTACCAAGAGAGATTTTTGGGAAATCAACGTTTGAATTAGGAGTTACGATGATGAAGTATATGCCCGTTTGGCTCGCGGACAAGACTATACTCTTTCTGGCGAGGATTATCTTGGGGAATACCGATAAATACGGTCTAAAAAGGCCGAAAATTGGACCGTTAGAGCTAAAGAACAAGGAAGGCAAAACTCCGGTTCTTGACATCGGAGCGTTACCCAAAATCAGATCGGGAAAGATCAAAATCGTCCCCGGAATCATAAAGTTCGGCAAAGGCAAAGTTGAGCTAATAGATGGCCGTGTTCTTGAGATTGATTCCGTTATTCTAGCTACTGGATACAGAAGCAACGTCCCTTCATGGCTTAAGGACAACGACTTCTTCTCCGATGATGGGATACCAAAAAACCCGTTTCCAAACGGATGGAAAGGAGAGGCGGGATTGTATGCGGTAGGGTTCACGAGAAAAGGATTGTTTGGTGCGTCGCTTGATGCTATGAGTGTGGCTCATGATATTGCTAATAGGTGGAAAGAAGAGTCTAAGCAACAGAAGAAAACTGCTGCTGCTCGTCATCGTCGTTGTATTTCACATTTCTAATCATCATTATCAAATTTAGGGaaaaaaatattcaaaaaaaGAAGAAGATAATTAAGCCCTCTCCTCGGAAGAAAATACCCCCaaaaaaaagagaattgtgaaaagaaaaaaataatagggggatttttctttgtttttttaggaagatgtggcttttttatgtatttttattttaagagtgctttattttgttgttgtattttttttAAATCTTCATTTTAGATTTTGAACTCTTGTAAGAAGTTTTGCTTAATCTAATATGACAAATATATTTTACGGTTTTGTaaaaaaaaaG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.10473 | translated coding region predicted by ESTScan from UniGene At.10473 | MYGNNNKKSINITSMFQNLIPEGSDIFSRRCIWVNGPVIVGAGPSGLAVAAGLKREGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNYPFPDEFPEYPTKFQFIQYLESYAANFDINPKFNETVQSAKYDETFGLWRVKTISNMGQLGSCEFEYICRWIVVATGENAEKVVPDFEGLEDFGGDVLHAGDYKSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPREIFGKSTFELGVTMMKYMPVWLADKTILFLARIILGNTDKYGLKRPKIGPLELKNKEGKTPVLDIGALPKIRSGKIKIVPGIIKFGKGKVELIDGRVLEIDSVILATGYRSNVPSWLKDNDFFSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEESKQQKKTAAARHRRCISHF |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23023:SF5 | 2-432 | PTHR23023:SF5,MONOOXYGENASE | YGNNNKKSINITSMFQNLIPEGSDIFSRRCIWVNGPVIVGAGPSGLAVAAGLKREGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNYPFPDEFPEYPTKFQFIQYLESYAANFDINPKFNETVQSAKYDETFGLWRVKTISNMGQLGSCEFEYICRWIVVATGENAEKVVPDFEGLEDFGGDVLHAGDYKSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPREIFGKSTFELGVTMMKYMPVWLADKTILFLARIILGNTDKYGLKRPKIGPLELKNKEGKTPVLDIGALPKIRSGKIKIVPGIIKFGKGKVELIDGRVLEIDSVILATGYRSNVPSWLKDNDFFSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEESKQQKKTAAARHRR |
| HMMPanther: PTHR23023 | 2-432 | PTHR23023,DIMETHYLANILINE MONOOXYGENASE | YGNNNKKSINITSMFQNLIPEGSDIFSRRCIWVNGPVIVGAGPSGLAVAAGLKREGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNYPFPDEFPEYPTKFQFIQYLESYAANFDINPKFNETVQSAKYDETFGLWRVKTISNMGQLGSCEFEYICRWIVVATGENAEKVVPDFEGLEDFGGDVLHAGDYKSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPREIFGKSTFELGVTMMKYMPVWLADKTILFLARIILGNTDKYGLKRPKIGPLELKNKEGKTPVLDIGALPKIRSGKIKIVPGIIKFGKGKVELIDGRVLEIDSVILATGYRSNVPSWLKDNDFFSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEESKQQKKTAAARHRR |
| FPrintScan: PR00469 IPR000103
|
36-58 | PNDRDTASEII Pyridine nucleotide-disulphide oxidoreductase, cla
|
GPVIVGAGPSGLAVAAGLKREGV |
| FPrintScan: PR00368 IPR013027
|
37-56 | FADPNR FAD-dependent pyridine nucleotide-disulphide oxido
|
PVIVGAGPSGLAVAAGLKRE |
| Gene3D: G3DSA:3.50.50.60 | 38-184 | G3DSA:3.50.50.60 | VIVGAGPSGLAVAAGLKREGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNYPFPDEFPEYPTKFQFIQYLESYAANFDINPKFNETVQSAKYDETFGLWRVKTISNMGQLGSCEFEYICRWIVVATGENAEKVVPDFEGL |
| superfamily: SSF51905 | 38-323 | SSF51905 | VIVGAGPSGLAVAAGLKREGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNYPFPDEFPEYPTKFQFIQYLESYAANFDINPKFNETVQSAKYDETFGLWRVKTISNMGQLGSCEFEYICRWIVVATGENAEKVVPDFEGLEDFGGDVLHAGDYKSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPREIFGKSTFELGVTMMKYMPVWLADKTILFLARIILGNTDKYGLKRPKIGPLELKNKEGKTPVLDIGALPKIRSGKIKIV |
| HMMPfam: PF00743 IPR020946
|
39-358 | FMO-like Flavin-containing monooxygenase-like
|
IVGAGPSGLAVAAGLKREGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNYPFPDEFPEYPTKFQFIQYLESYAANFDINPKFNETVQSAKYDETFGLWRVKTISNMGQLGSCEFEYICRWIVVATGENAEKVVPDFEGLEDFGGDVLHAGDYKSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPREIFGKSTFELGVTMMKYMPVWLADKTILFLARIILGNTDKYGLKRPKIGPLELKNKEGKTPVLDIGALPKIRSGKIKIVPGIIKFGKGKVELIDGRVLEIDSVILATGYRSNVP |
| FPrintScan: PR00368 IPR013027
|
163-181 | FADPNR FAD-dependent pyridine nucleotide-disulphide oxido
|
CRWIVVATGENAEKVVPDF |
| Gene3D: G3DSA:3.50.50.60 | 185-244 | G3DSA:3.50.50.60 | EDFGGDVLHAGDYKSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPR |
| FPrintScan: PR00469 IPR000103
|
203-227 | PNDRDTASEII Pyridine nucleotide-disulphide oxidoreductase, cla
|
YQGKKVLVVGCGNSGMEVSLDLYNH |
| FPrintScan: PR00368 IPR013027
|
207-225 | FADPNR FAD-dependent pyridine nucleotide-disulphide oxido
|
KVLVVGCGNSGMEVSLDLY |
| Gene3D: G3DSA:3.50.50.60 | 318-340 | G3DSA:3.50.50.60 | GKIKIVPGIIKFGKGKVELIDGR |
| superfamily: SSF51905 | 330-422 | SSF51905 | GKGKVELIDGRVLEIDSVILATGYRSNVPSWLKDNDFFSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEESKQQ |
| Gene3D: G3DSA:3.50.50.60 | 341-418 | G3DSA:3.50.50.60 | VLEIDSVILATGYRSNVPSWLKDNDFFSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEE |
List of Contributions
There has not been any contribution yet.
