PRGDB00065924 (At.11057)

At.11057
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	145336931 (NM_104854)
Gene Class	Unknown
Domain Type
Gene Species	Arabidopsis thaliana
	Comment?

Arabidopsis thaliana BAN (BANYULS); oxidoreductase (BAN) mRNA, complete cds

DNA Sequence

ATAACAACTAAATCTCTATCTCTGTAATTTCAAAAGTACAATCATGGACCAGACTCTTACACACACCGGATCGAAGAAGGCTTGTGTCATTGGTGGCACGGGAAACTTAGCCTCTATTCTCATCAAGCATTTGCTTCAAAGTGGCTACAAAGTTAACACTACAGTTAGAGATCCAGAAAACGAGAAGAAAATAGCTCACCTTAGGAAACTTCAAGAGCTTGGCGACCTGAAGATCTTCAAGGCAGATTTGACTGATGAAGACAGTTTCGAATCCTCATTCTCCGGCTGTGAATACATCTTCCATGTCGCAACTCCGATCAACTTTAAATCCGAAGATCCCGAGAAAGACATGATCAAGCCGGCGATACAAGGAGTGATCAATGTGTTGAAATCTTGCTTAAAATCGAAATCAGTCAAGCGTGTGATCTACACATCTTCAGCTGCTGCTGTTTCCATCAACAATCTTTCTGGAACCGGAATCGTGATGAACGAAGAAAACTGGACTGACGTTGAATTTCTCACAGAGGAGAAGCCTTTTAACTGGGGTTACCCAATCTCGAAGGTGTTAGCAGAAAAGACAGCTTGGGAATTTGCAAAAGAGAATAAGATCAATCTCGTTACCGTGATTCCGGCACTTATAGCCGGAAACTCTCTCCTCTCCGATCCTCCGAGTAGCTTATCTCTCTCGATGTCTTTCATCACCGGGAAAGAAATGCATGTGACCGGTCTCAAGGAAATGCAGAAGCTATCTGGCTCGATCTCGTTCGTCCACGTAGACGATTTAGCTCGTGCCCATTTGTTTCTTGCGGAGAAAGAAACTGCTTCTGGTCGCTACATTTGCTGTGCTTACAACACAAGTGTTCCAGAGATTGCGGATTTTCTCATACAGAGATATCCTAAGTACAATGTGTTGTCAGAATTCGAAGAGGGCTTGTCGATTCCGAAATTGACACTATCTTCGCAAAAACTTATCAATGAAGGCTTTCGATTCGAATATGGGATCAATGAGATGTATGATCAAATGATAGAGTACTTCGAGTCAAAAGGATTGATCAAAGCTAAATAAACTTGACTTTTATAATGTCAAAATGGATTCAAAGAGTATATGAGTCTTTGGTCTCATTCTCATTCTATAAAATGGTATTGAATAATTATGTATTATATGTTGGTTGATTTAATGTCTTTTGATACATAAATATTACATACTTTTGAAATGAACTTGTG

Protein sequences

Name	Description	Sequence
At.11057	translated coding region predicted by ESTScan from UniGene At.11057	MDQTLTHTGSKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFESKGLIKAK

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR10366:SF9	1-340	PTHR10366:SF9,CINNAMOYL-COA REDUCTASE	MDQTLTHTGSKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFESKGLIKAK
HMMPanther: PTHR10366	1-340	PTHR10366,NAD DEPENDENT EPIMERASE/DEHYDRATASE	MDQTLTHTGSKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFESKGLIKAK
Gene3D: G3DSA:3.40.50.720 IPR016040	10-283	NAD(P)-bd NAD(P)-binding domain	SKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQR
superfamily: SSF51735	11-333	NAD(P)-bd	KKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFES
HMMPfam: PF01370 IPR001509	14-264	Epimerase NAD-dependent epimerase/dehydratase	CVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRY

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Analyses

Blast

Blast matches against Reference R-Genes. Show