PRGDB00065933 (At.11883)
| At.11883 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 13877528 (AF370465) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AAAAAGAGCTTTTGAGTTTTGGTCGTACaaaaaaaaaGAAAGGGAAAATGAAGATAGGACCTGTAGGGAAGCATGATGCTAGAAGCACTACAATTGTAAACTGGGGCGAAGGATCTCACGATGGCTTCATCTCTCAGATTTTTCTATCTCATGGCGTCGCTGGAATTATGTCTATCCAATTCCAGTTCGTGATGGACGGAAAACTCGTTTTATCCGATCGTCACGGTCCATTTTCCGGCAACATGTTTGACGTTATAGAGCTCAACTATCCGCATGAGTACATAACTGGAATCAGTGGAGAGTATTACAAGTATGAAGCCAACAATCCTCACATGAGGTCTCTCAAATTCAATACCAACACTAGCGAGTACGGTCCTTTTGGCACCTCCGGTTCGAGCAACGACAAATTTGCTTTTAAACTCGGGAAATCTCCTCAGTTCGGCGGTTTCCATGGGACTTATGATGCCTCGGGACTACAGTACATTGGTGTTTATCTCCGCCCAAAAACAGTTCTACCCAAAATAGATACGGGCAATGCAGAGGAAACAGAGTCAAAAATTGTACTGGGCTGAAAGTGTTTGTATACGACTCTATTCTGCTGATTGTACATTCTTAATTATGAAAATTCTTCTATGAATaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.11883 | translated coding region predicted by ESTScan from UniGene At.11883 | MKIGPVGKHDARSTTIVNWGEGSHDGFISQIFLSHGVAGIMSIQFQFVMDGKLVLSDRHGPFSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQFGGFHGTYDASGLQYIGVYLRPKTVLPKIDTGNAEETESKIVLG |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF51101 IPR001229
|
1-152 | Mannose-bd_lectin Mannose-binding lectin
|
MKIGPVGKHDARSTTIVNWGEGSHDGFISQIFLSHGVAGIMSIQFQFVMDGKLVLSDRHGPFSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQFGGFHGTYDASGLQYIGVYLRP |
| Gene3D: G3DSA:2.100.10.30 IPR001229
|
2-152 | Mannose-bd_lectin Mannose-binding lectin
|
KIGPVGKHDARSTTIVNWGEGSHDGFISQIFLSHGVAGIMSIQFQFVMDGKLVLSDRHGPFSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQFGGFHGTYDASGLQYIGVYLRP |
| HMMSmart: SM00915 IPR001229
|
16-152 | Jacalin Mannose-binding lectin
|
IVNWGEGSHDGFISQIFLSHGVAGIMSIQFQFVMDGKLVLSDRHGPFSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQFGGFHGTYDASGLQYIGVYLRP |
| HMMPfam: PF01419 IPR001229
|
19-152 | Jacalin Mannose-binding lectin
|
WGEGSHDGFISQIFLSHGVAGIMSIQFQFVMDGKLVLSDRHGPFSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQFGGFHGTYDASGLQYIGVYLRP |
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