PRGDB00065944 (At.13683)
At.13683 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 79324529 (NM_001036421) |
Gene Class | RLP |
Domain Type | Ser-Thr Kinase, LRR |
Gene Species | Arabidopsis thaliana |
DNA Sequence
CTCTCTCACATAAAAAAAGCAAACACTTAACGAGGAAGAAACACACTCATATCTCCTCACGTTCCCCaattttttgatttttattatctttttgggtttttgggtttGGTTAAACCATTTATGGGTCTTTAGATCTCTCTTGATAGTAAAGATAAGTAATTTTAGGGTCTGTTTGGTTCTGTTTCTGGAAAtttcacttttttcacttttttgggatcacatttagctttttttggttcctttattttGTAACGCCATTTATGCGTTAAACTTGTGTGAAGTGTTTGTTTGGTCTGAGCTGGAGATGGTGAGAATCTCACTGCTTTTGTTGTGTTTACTGGTTTCAACTTGTCTCTTCACTTCTTCATCAGCACAAGCTCCAGGTTTTGTGAGCTTGGATTGTGGAGGTGCAGAGCCATTCACTGATGAACTTGGACTCAAATGGTCACCTGATAATCATCTCATTTATGGAGAAACCGCTAATATATCGTCCGTTAACGAAACAAGAACTCAGTACACGACTTTAAGGCATTTCCCTGCTGATTCAAGAAAGTATTGCTACACTCTCAATGTCACGAGTAGGAATAGATATCTCATTAGAGCTACTTTCTTGTATGGTAATTTCGACAACAGCAACAATGTGTATCCCAAATTCGATATCTCCCTCGGGGCGACTCATTGGGCGACCATTGTTATCTCTGAAACCTATATAATCGAAACTGCAGAACTGGTGTTTCTGGCTTCTTCTCCTACTGTTAGTGTTTGTTTGTCAAATGCCACAACTGGACAGCCGTTTATATCTACTCTTGAGCTTAGGCAGTTGAGTGGTTCGATGTATGGTTCGATGCTATCTGAAGACCGGTTTTACCTGAGTGTTGCAGCACGGATAAATTTCGGGGCTGAAAGTGAAGCTTCTGTGAGGTACCCGGATGATCCGTATGATAGAATATGGGAATCTGATTTGCAAAAGAAGCCTAATTATCTTGTGGATGTTGCTGCTGGGACTGTGCGAGTGTCGACTACATTGCCAATCGAAAGCAGGGTCGATGACAGACCGCCTCAGAAGGTTATGCAGACGGCTGTGGTTGGAACAAACGGGTCCTTAACTTACAGAATGAACCTAGATGGCTTCCCTGGTTTTGGTTGGGCATTCACATACTTTGCTGAAATCGAGGATTTGGCTGAGGATGAGTCAAGGAAGTTTAGATTAGTTCTACCTGAGCAGCCTGAGTATAGCAAATCGGTTGTTAACATCAAGGAAAATACACAGAGACCGTATCGCGTTTATGCACCTGGCTATCCTAACATAACACTTCCATTTGTGCTAAACTTTCGATTTGCCAAAACGGCTGATTCTTCTAGGGGACCTATTCTGAATGCCATGGAGATCAGCAAATATTTGCGGAAAAGCGATGGTTCAGTAGATGCAACTGTTATGGCTAATGTGGCATCGCTATATTCTTCCACTGAATGGGCTCAAGAAGGCGGTGACCCTTGTTCACCCTCACCGTGGTCATGGGTGCAATGCAATTCGGATCCACAACCAAGGGTTGTTGCTATCAAGCTGTCGAGTATGAACTTGACGGGAAATATACCTTCTGACCTGGTGAAATTGACTGGTTTGGTTGAGTTATGGCTTGATGGGAATTCTTTTACGGGTCCAATACCGGATTTCTCTCGGTGTCCAAACCTGGAGATAATACACCTCGAGAACAACCGACTAACCGGAAAGATCCCTTCCTCGTTGACGAAACTCCCAAACCTGAAAGAACTGTACCTGCAGAACAATGTGTTAACAGGAACAATACCATCAGACCTGGCCAAAGATGTGATCTCAAACTTCTCTGGGAACCTTAACCTTGAAAAAAGTGGAGATAAAGGCAAGAAGCTCGGTGTCATCATCGGTGCATCAGTTGGTGCTTTTGTTCTGCTAATTGCAACCATCATTTCTTGCATCGTCATGTGCAAAAGCAAGAAGAATAACAAGTTGGGAAAAACTTCGGAGTTAACGAATCGTCCCTTACCGATTCAGAGAGTTTCGTCTACCTTGAGTGAAGCTCATGGAGACGCTGCACATTGCTTCACACTTTATGAGATCGAGGAAGCCACAAAAAAATTCGAAAAGAGAATTGGGTCGGGAGGTTTTGGAATCGTATACTATGGTAAAACAAGGGAGGGGAAAGAGATTGCTGTAAAGGTTCTTGCAAATAATTCATATCAGGGAAAGAGAGAGTTTGCAAACGAGGTTACATTACTCTCAAGGATACATCATCGGAACCTTGTGCAGTTTCTTGGTTATTGCCAAGAAGAGGGAAAAAACATGCTTGTGTATGAGTTCATGCACAATGGGACTTTGAAGGAGCATCTTTATGGCGTGGTACCACGTGACCGGAGAATCAGTTGGATTAAAAGGCTTGAGATAGCTGAAGATGCAGCCCGAGGTCCGTGAATTGTACAACAAAACAGAAAGCcattttttcgatatttgattttgttggttttgattgtttCTGTAGGGATCGAGTATCTTCACACAGGGTGTGTTCCAGCAATCATACATAGAGATCTCAAGACTAGTAACATCCTACTTGACAAACACATGAGGGCAAAGGTTTCAGATTTCGGTTTGTCGAAATTCGCAGTTGACGGGACCTCACATGTCTCCAGCATTGTCCGTGGCACAGTTGGATATCTTGACCCCGAGTACTATATATCGCAGCAGTTAACAGAGAAGAGTGATGTATATAGCTTCGGAGTCATTCTTCTTGAGCTAATGTCTGGCCAAGAAGCCATATCGAATGAAAGCTTTGGTGTCAACTGCCGGAACATAGTCCAATGGGCTAAGATGCATATAGACAACGGGGACATCCGAGGGATCATCGATCCAGCGCTAGCGGAAGATGATTACAGTCTCCAATCAATGTGGAAGATTGCGGAGAAAGCGTTGCTGTGTGTGAAACCGCACGGGAACATGAGACCTTCGATGTCCGAGGTGCAAAAAGATATCCAAGACGCGATTAGGATCGAGAAGGAAGCGTTGGCTGCAAGAGGCGGTATATCAGACGAGTTTTCCAGGAGCTCGGCTCATTCGTCTTCGCTCAACATGGGAATGCTTGACCTGGCTGGATCACAGAGTTATGTATCCATTGATGAATCAGTATTGCAGCCAACAGCTCGGTAGTAGATTCGGCTTTGTTTGTACAGATGCATTACTTGCTTGTGTTTTTGACCTTTCACATTGTCTCTGGTCTTTAGTTATTAGTTTTGAGCTTAACACTACttttttttctttcttttggactcgaggttacaagaagtgcttcgagtttgtttgtttttcttttattgttttCAGACTAACTCGGTGATTTATGTGGGATTGTGATATATTATGTTTTCTTTTAACTGATTTTCACATTTTCAACTGATT
Protein sequences
Name | Description | Sequence |
---|---|---|
At.13683 | translated coding region predicted by ESTScan from UniGene At.13683 | MVRISLLLLCLLVSTCLFTSSSAQAPGFVSLDCGGAEPFTDELGLKWSPDNHLIYGETANISSVNETRTQYTTLRHFPADSRKYCYTLNVTSRNRYLIRATFLYGNFDNSNNVYPKFDISLGATHWATIVISETYIIETAELVFLASSPTVSVCLSNATTGQPFISTLELRQLSGSMYGSMLSEDRFYLSVAARINFGAESEASVRYPDDPYDRIWESDLQKKPNYLVDVAAGTVRVSTTLPIESRVDDRPPQKVMQTAVVGTNGSLTYRMNLDGFPGFGWAFTYFAEIEDLAEDESRKFRLVLPEQPEYSKSVVNIKENTQRPYRVYAPGYPNITLPFVLNFRFAKTADSSRGPILNAMEISKYLRKSDGSVDATVMANVASLYSSTEWAQEGGDPCSPSPWSWVQCNSDPQPRVVAIKLSSMNLTGNIPSDLVKLTGLVELWLDGNSFTGPIPDFSRCPNLEIIHLENNRLTGKIPSSLTKLPNLKELYLQNNVLTGTIPSDLAKDVISNFSGNLNLEKSGDKGKKLGVIIGASVGAFVLLIATIISCIVMCKSKKNNKLGKTSELTNRPLPIQRVSSTLSEAHGDAAHCFTLYEIEEATKKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDIQDAIRIEKEALAARGGISDEFSRSSAHSSSLNMGMLDLAGSQSYVSIDESVLQPTAR |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
Seg: seg | 5-22 | seg | SLLLLCLLVSTCLFTSSS |
HMMPfam: PF12819 IPR024788
|
31-364 | Malectin_like,Carbohydrate-binding protein of the ER Malectin-like carbohydrate-binding domain
|
LDCGGAEPFTDELGLKWSPDNHLIYGETANISSVNETRTQYTTLRHFPADSRKYCYTLNVTSRNRYLIRATFLYGNFDNSNNVYPKFDISLGATHWATIVISETYIIETAELVFLASSPTVSVCLSNATTGQPFISTLELRQLSGSMYGSMLSEDRFYLSVAARINFGAESEASVRYPDDPYDRIWESDLQKKPNYLVDVAAGTVRVSTTLPIESRVDDRPPQKVMQTAVVGTNGSLTYRMNLDGFPGFGWAFTYFAEIEDLAEDESRKFRLVLPEQPEYSKSVVNIKENTQRPYRVYAPGYPNITLPFVLNFRFAKTADSSRGPILNAMEISK |
HMMPanther: PTHR24420:SF549 | 330-958 | SUBFAMILY NOT NAMED | PGYPNITLPFVLNFRFAKTADSSRGPILNAMEISKYLRKSDGSVDATVMANVASLYSSTEWAQEGGDPCSPSPWSWVQCNSDPQPRVVAIKLSSMNLTGNIPSDLVKLTGLVELWLDGNSFTGPIPDFSRCPNLEIIHLENNRLTGKIPSSLTKLPNLKELYLQNNVLTGTIPSDLAKDVISNFSGNLNLEKSGDKGKKLGVIIGASVGAFVLLIATIISCIVMCKSKKNNKLGKTSELTNRPLPIQRVSSTLSEAHGDAAHCFTLYEIEEATKKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDIQDAIRIEKEALAARGGISDEFSRSSAHSSSLNMGMLDLAGSQSYVSIDESVLQPTAR |
HMMPanther: PTHR24420 | 330-958 | FAMILY NOT NAMED,FAMILY NOT NAMED | PGYPNITLPFVLNFRFAKTADSSRGPILNAMEISKYLRKSDGSVDATVMANVASLYSSTEWAQEGGDPCSPSPWSWVQCNSDPQPRVVAIKLSSMNLTGNIPSDLVKLTGLVELWLDGNSFTGPIPDFSRCPNLEIIHLENNRLTGKIPSSLTKLPNLKELYLQNNVLTGTIPSDLAKDVISNFSGNLNLEKSGDKGKKLGVIIGASVGAFVLLIATIISCIVMCKSKKNNKLGKTSELTNRPLPIQRVSSTLSEAHGDAAHCFTLYEIEEATKKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDIQDAIRIEKEALAARGGISDEFSRSSAHSSSLNMGMLDLAGSQSYVSIDESVLQPTAR |
Gene3D: G3DSA:3.80.10.10 | 396-507 | no description | DPCSPSPWSWVQCNSDPQPRVVAIKLSSMNLTGNIPSDLVKLTGLVELWLDGNSFTGPIPDFSRCPNLEIIHLENNRLTGKIPSSLTKLPNLKELYLQNNVLTGTIPSDLAK |
superfamily: SSF52058 | 396-507 | L domain-like,LRR | DPCSPSPWSWVQCNSDPQPRVVAIKLSSMNLTGNIPSDLVKLTGLVELWLDGNSFTGPIPDFSRCPNLEIIHLENNRLTGKIPSSLTKLPNLKELYLQNNVLTGTIPSDLAK |
HMMPfam: PF13855 | 439-496 | LRR_8,Leucine rich repeat | GLVELWLDGNSFTGPIPDFSRCPNLEIIHLENNRLTGKIPSSLTKLPNLKELYLQNNV |
superfamily: SSF56112 IPR011009
|
575-901 | Protein kinase-like (PK-like) Protein kinase-like domain
|
IQRVSSTLSEAHGDAAHCFTLYEIEEATKKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDI |
Gene3D: G3DSA:3.30.200.20 | 588-664 | no description | DAAHCFTLYEIEEATKKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLG |
ProfileScan: PS50011 IPR000719
|
603-882 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
KKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALL |
HMMSmart: SM00220 IPR002290
|
603-905 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
KKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDIQDAI |
HMMSmart: SM00219 IPR020635
|
603-901 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
KKFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDI |
HMMPfam: PF07714 IPR001245
|
604-829 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
KFEKRIGSGGFGIVYYGKTREGKEIAVKVLANNSYQGKREFANEVTLLSRIHHRNLVQFLGYCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEA |
PatternScan: PS00107 IPR017441
|
609-631 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGSGGFGIVYYGKTREGKEIAVK |
Gene3D: G3DSA:1.10.510.10 | 665-897 | no description | YCQEEGKNMLVYEFMHNGTLKEHLYGVVPRDRRISWIKRLEIAEDAARGPXIVQQNRKPFFRYLILLVLIVSVGIEYLHTGCVPAIIHRDLKTSNILLDKHMRAKVSDFGLSKFAVDGTSHVSSIVRGTVGYLDPEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGIIDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEV |
Seg: seg | 728-735 | seg | LILLVLIV |
PatternScan: PS00108 IPR008271
|
750-762 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDLKTSNILL |
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