PRGDB00066067 (At.22848)
| At.22848 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 145358538 (NM_122928) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AACACaaaaaaaaaCAAGAACTCATTCAGATTCTTCTCTGATGATCCACTTCTTGTAATAATAACAAAAACAAACAGAGTGGTTTCTCTATGAAATCAACGTTTCtgttgttgttgttgttACTTAGTCTCAATCTTCTCTTTGTCTTTGTTTCATGTGCTTCTTCCATAGAGTTTGTTTACCCTAATTTCACAGCTTCTAACCTCAGATTCGTCGATAGCTCCAAAGGAGCTTTCCTCTTGTCTCGTAATTCCATCTTCAAAGCCGGTTTATTCAGTCCCGGCGGCGATGATTCCTCTACCGGTTTCTACTTCTCCGTCGTCCATGTCGATTCCGGTTCAACAATCTGGTCATCAAATCGAGATTCCCCTGTTTCAAGCTCTGGTACAATGAATCTTACTCCTCAAGGAATCTCTGTTATTGAAGATGGTAAAAGTCAAATACCAGTTTGGTCAACGCCGGTTTTAGCTTCTCCGGTTAAGTCCCTTCGGTTAACCGACGCCGGTAATCTCCTTCTTCTTGATCACTTGAACGTTTCTCTATGGGAAAGCTTTGATTTTCCTACTGACTCGATCGTTCTTGGACAAAGACTTAAGCTTGGGATGTTCTTGTCCGGATCCGTCTCGCGGTCTGATTTCTCTACCGGAGATTATAAGTTCTTGGTCGGTGAATCCGACGGTTTGATGCAGTGGAGAGGACAGAATTATTGGAAGCTAAGGATGCATATACGAGCTAATGTTGATTCTAACTTCCCTGTTGAGTATCTAACGGTCACTACTTCAGGATTAGCTCTTATGGCACGGAACGGGACGGTGGTTGTAGTCCGCGTGGCTTTACCACCGTCCTCTGATTTCCGAGTGGCGAAGATGGATTCATCAGGTAAGTTCATCGTTAGTAGATTCTCCGGGAAGAATCTTGTGACGGAATTCTCTGGTCCTATGGATTCTTGTCAGATTCCGTTTGTCTGCGGTAAGCTCGGGCTTTGTAATCTTGATAACGCTTCGGAAAATCAGAGCTGTTCATGTCCAGATGAGATGCGAATGGATGCTGGTAAGGGTGTGTGTGTTCCGGTTAGCCAATCATTGAGTTTACCTGTTTCTTGTGAAGCAAGAAACATTTCGTATCTCGAACTAGGTCTTGGTGTGTCTTACTTCTCTACTCATTTCACCGATCCTGTGGAACACGGTCTCCCGTTATTGGCTTGTCATGATATTTGCAGTAAGAATTGCTCTTGCCTCGGTGTTTTCTATGAGAACACGTCTCGGTCTTGTTATCTCGTAAAGGACTCGTTTGGTTCTTTGTCTTTAGTAAAGAACTCACCAGAGAATCATGATCTTATTGGATACGTTAAGTTGTCTATCAGAAAAACAAACGCTCAGCCTCCGGGAAACAATAACAGAGGAGGATCTAGCTTCCCTGTGATCGCACTTGTGCTCTTACCTTGCTCTGGTTTCTTCCTTTTGATTGCATTAGGGCTTCTCTGGTGGCGTAGATGTGCAGTGATGAGATACAGTAGCATCCGTGAGAAGCAAGTAACTAGACCCGGGTCGTTCGAATCAGGAGATCTAGGATCTTTCCATATCCCGGGGTTACCTCAGAAATTCGAATTCGAGGAGCTGGAACAAGCAACTGAGAATTTCAAGATGCAGATAGGATCAGGCGGATTTGGATCAGTCTACAAAGGAACTCTCCCAGATGAAACACTCATTGCTGTCAAGAAAATCACAAACCATGGACTTCACGGTAGACAAGAGTTTTGTACGGAAATCGCGATAATTGGAAATATCAGACACACGAATCTAGTGAAACTGCGAGGCTTTTGCGCTCGCGGGAGGCAGTTACTCTTAGTCTACGAGTACATGAACCATGGCTCGTTAGAAAAGACTCTGTTTAGTGGGAATGGTCCGGTGCTTGAGTGGCAAGAAAGGTTTGATATAGCGCTCGGGACTGCTCGCGGGCTCGCGTATCTCCACAGTGGTTGCGACCAGAAGATCATACACTGCGATGTGAAGCCAGAGAACATCTTACTGCACGATCATTTCCAACCTAAGATATCTGATTTCGGGTTATCAAAGCTTCTTAATCAAGAAGAATCAAGTCTGTTCACTACGATGAGAGGTACTCGAGGCTATTTAGCTCCAGAGTGGATAACAAACGCAGCGATCTCCGAGAAAGCTGATGTGTACAGCTATGGAATGGTTTTGTTAGAACTAGTGAGTGGTAGGAAAAACTGTTCTTTTCGATCTCGGAGCAACAGTGTGACGGAGGATAATAATCAGAACCACTCGTCGACTACGACCACTAGTACTGGTTTGGTGTATTTCCCATTGTACGCTTTGGATATGCATGAACAAGGGAGGTATATGGAGCTCGCTGATCCGAGGCTAGAGGGTCGGGTAACGAGCCAAGAGGCTGAGAAGTTGGTTCGGATAGCTTTGTGTTGCGTCCACGAGGAGCCAGCATTGAGGCCAACAATGGCAGCGGTAGTGGGTATGTTCGAAGGAAGTATACCGTTGGGGAACCCGAGGATGGAGTCGTTGAACTTCTTGAGGTTTTATGGGCTGAGGTTTGCGGAGTCTTCCATGGTTGAAGGACAAAATGGGGAGAGTGAAACTATGGTCTTCCACCGGCGAGAGAGCTCTAATAGTGGCGGCTCTAGGCAGTCTGCGTCTTACATAGCGTCTCAGGAAGTGTCCGGCCCGCGATGAGATCACCTAAATGTGAATTatttttgtcttttgttttatttggttttggttactttgTTAATAGTGATAGGCCTTGTTCATATAATCTCTACTATATATGAAAATTATTGAAAAATCTTGACATAGAGACT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.22848 | translated coding region predicted by ESTScan from UniGene At.22848 | MNLTPQGISVIEDGKSQIPVWSTPVLASPVKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDFSTGDYKFLVGESDGLMQWRGQNYWKLRMHIRANVDSNFPVEYLTVTTSGLALMARNGTVVVVRVALPPSSDFRVAKMDSSGKFIVSRFSGKNLVTEFSGPMDSCQIPFVCGKLGLCNLDNASENQSCSCPDEMRMDAGKGVCVPVSQSLSLPVSCEARNISYLELGLGVSYFSTHFTDPVEHGLPLLACHDICSKNCSCLGVFYENTSRSCYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQPPGNNNRGGSSFPVIALVLLPCSGFFLLIALGLLWWRRCAVMRYSSIREKQVTRPGSFESGDLGSFHIPGLPQKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEGSIPLGNPRMESLNFLRFYGLRFAESSMVEGQNGESETMVFHRRESSNSGGSRQSASYIASQEVSGPR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF01453 IPR001480
|
3-71 | B_lectin Bulb-type lectin domain
|
LTPQGISVIEDGKSQIPVWSTPVLASPVKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLG |
| superfamily: SSF51110 IPR001480
|
10-113 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
VIEDGKSQIPVWSTPVLASPVKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDFSTGDYKFLVGESDGLMQWRGQNYWKLRMHI |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
10-108 | no description Bulb-type lectin domain
|
VIEDGKSQIPVWSTPVLASPVKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDFSTGDYKFLVGESDGLMQWRGQNYWK |
| HMMPanther: PTHR24420:SF781 | 30-768 | SUBFAMILY NOT NAMED | VKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDFSTGDYKFLVGESDGLMQWRGQNYWKLRMHIRANVDSNFPVEYLTVTTSGLALMARNGTVVVVRVALPPSSDFRVAKMDSSGKFIVSRFSGKNLVTEFSGPMDSCQIPFVCGKLGLCNLDNASENQSCSCPDEMRMDAGKGVCVPVSQSLSLPVSCEARNISYLELGLGVSYFSTHFTDPVEHGLPLLACHDICSKNCSCLGVFYENTSRSCYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQPPGNNNRGGSSFPVIALVLLPCSGFFLLIALGLLWWRRCAVMRYSSIREKQVTRPGSFESGDLGSFHIPGLPQKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEGSIPLGNPRMESLNFLRFYGLRFAESSMVEGQNGESETMVFHRRESSNSGGSRQSASYIASQEV |
| HMMPanther: PTHR24420 | 30-768 | FAMILY NOT NAMED,FAMILY NOT NAMED | VKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDFSTGDYKFLVGESDGLMQWRGQNYWKLRMHIRANVDSNFPVEYLTVTTSGLALMARNGTVVVVRVALPPSSDFRVAKMDSSGKFIVSRFSGKNLVTEFSGPMDSCQIPFVCGKLGLCNLDNASENQSCSCPDEMRMDAGKGVCVPVSQSLSLPVSCEARNISYLELGLGVSYFSTHFTDPVEHGLPLLACHDICSKNCSCLGVFYENTSRSCYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQPPGNNNRGGSSFPVIALVLLPCSGFFLLIALGLLWWRRCAVMRYSSIREKQVTRPGSFESGDLGSFHIPGLPQKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEGSIPLGNPRMESLNFLRFYGLRFAESSMVEGQNGESETMVFHRRESSNSGGSRQSASYIASQEV |
| Seg: seg | 33-51 | seg | LRLTDAGNLLLLDHLNVSL |
| Seg: seg | 224-238 | seg | VCVPVSQSLSLPVSC |
| Gene3D: G3DSA:3.30.200.20 | 402-477 | no description | PQKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGF |
| superfamily: SSF56112 IPR011009
|
403-734 | Protein kinase-like (PK-like) Protein kinase-like domain
|
QKFEFEELEQATENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEGSIPLGNPRMESLNFLRFYGLRFAESSMVE |
| ProfileScan: PS50011 IPR000719
|
415-714 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
ENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEGSIPLGNPRM |
| HMMSmart: SM00219 IPR020635
|
415-703 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
ENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMF |
| HMMSmart: SM00220 IPR002290
|
415-703 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
ENFKMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMF |
| HMMPfam: PF00069 IPR017442
|
418-699 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
KMQIGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAV |
| PatternScan: PS00107 IPR017441
|
421-444 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGSGGFGSVYKGTLPDETLIAVKK |
| PatternScan: PS00108 IPR008271
|
535-547 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHCDVKPENILL |
| Seg: seg | 633-640 | seg | SSTTTTST |
| Gene3D: G3DSA:1.10.510.10 | 645-697 | no description | FPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMA |
| Seg: seg | 747-761 | seg | RRESSNSGGSRQSAS |
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