PRGDB00066152 (At.27667)
| At.27667 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 30689340 (NM_119383) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AAGACACTCGCAGCAtctctctacttctctctctctctGTTTCAACCCCTCTTGTCGTCTATCTCCATCAAAAAGACCAAAATCAAACATCATTGAATGTTAGACAGAGAGGCAAAAACTAATCAAAGTGTTTCTAATCCCTGAAAATAAGCCCACTTCTTCTATTTTCCTCATTTCAGTTTCTGGGTTTTAATCGATCTCCCCCTTTCTCACCCTTCCGTCTGAATTCCGGTCTGCAATCGTCGGAAAGTTTTGGACTTTACACCAACGCCAAAGCGAGTTCTTGTTTCTCTGTTTGCTTCTCTAGGACCAATCAGTTTCCATTTACAGATGCGTACTATTCACCTGTCAGAGCTCTGAGATTTGTCTTTTTGCATCTCTCTGAATATTTCTCTTTTCTCAGATCCATTGACCTCATCCACATACATAAAGTTTAGGTATTTTTAAAAGGGTTCAATTCTGGGGTTTACCGGAATTTCATCATCTTTGAAGACCATGAGAGGCGTCTTCATCGTCATCGTAACGTGTCTGGTTTTCTTACCGGATCCTCTACGTGCCGGTGTAGCGTCCATCGGGAGCATCACTCCAGGTTTTGGAGGATCTCAGATGAATTACATCAACAACGATGGTATCTTCCTCGAATCCAACAACTCAGCCTTCGGTTTCGGTTTCGTAACTACACAAGATTCCGTTACTCTGTTCACACTCAGTATCATCCACAAGAGCAGCACGAAACTGATCTGGTCCGCGAACAGAGCTTCCCCTGTTTCCAATTCCGACAAGTTTGTGTTCGATGACAACGGAAATGTGGTGATGGAAGGAACTGAGGTTTGGAGATTGGATAATTCAGGCAAAAACGCTTCAAGAATCGAGCTGCGTGACTCCGGGAATCTCGTTGTTGTTTCCGTTGACGGAACTTCGATCTGGGAGAGTTTTGATCATCCGACAGATACTCTGATCACGAATCAAGCTTTCAAAGAAGGCATGAAGCTCACTAGCAGTCCTTCTTCGAGCAACATGACTTATGCCCTTGAGATCAAATCAGGAGATATGGTTTTATCTGTTAACAGCTTAACCCCTCAAGTGTATTGGTCAATGGCAAATGCCAGAGAGAGGATCATCAACAAAGATGGCGGCGTAGTGACTTCATCGTCTCTCCTTGGGAATTCATGGCGGTTCTTTGATCAGAAACAGGTTTTGTTGTGGCAGTTTGTATTCTCAGACAATAAAGATGATAACACAACTTGGATCGCTGTTTTGGGAAACAACGGTGTGATCTCTTTTTCTAATCTTGGAAGCGGAGCATCTGCTGCCGATTCTTCGACTAAAATACCTAGCGATCTGTGCGGAACACCTGAGCCTTGCGGGCCTTACTATGTCTGCTCGGGTTCTAAAGTGTGTGGATGTGTGTCCGGGTTGTCTCGGGCTCGGTCTGATTGCAAAACCGGGATTACTTCTCCCTGTAAGAAAACCAAGGATAATGCAACATTGCCTTTGCAGCTAGTAAGTGCTGGAGACGGTGTAGACTATTTCGCTCTTGGGTATGCTCCTCCGTTCTCCAAGAAAACTGATCTTGATAGCTGTAAAGAGTTCTGCCACAACAATTGCTCGTGCCTTGGTCTTTTCTTCCAGAACAGTTCTGGTAATTGCTTCTTGTTTGATTATATTGGAAGCTTTAAAACCTCTGGCAATGGAGGCTCTGGGTTTGTGTCTTACATCAAGATCGCAAGTACTGGTTCTGGAGGTGGAGATAACGGAGAAGATGATGGGAAACATTTTCCTTATGTAGTGATTATTGTCGTGGTAACAGTTTTTATCATCGCTGTTTTGATCTTTGTGGCCTTCCGGATTCATAAGAGAAAGAAAATGATTTTGGAGGCTCCTCAAGAGAGTTCAGAAGAAGATAACTTCTTGGAGAACTTATCCGGGATGCCTATTCGGTTCGCTTACAAAGATCTTCAGTCAGCGACGAATAACTTCTCGGTGAAGTTAGGTCAAGGAGGGTTTGGATCGGTCTATGAAGGTACTTTACCAGATGGTTCTCGTCTAGCTGTGAAGAAACTTGAAGGAATCGGTCAAGGGAAGAAAGAATTCAGAGCCGAGGTTAGTATAATCGGAAGTATTCATCATCTGCACTTGGTGCGGCTAAGAGGATTCTGCGCAGAAGGGGCTCATAGGCTGCTCGCATACGAGTTCTTATCCAAAGGTTCGTTGGAGAGATGGATATTTAGGAAAAAGGATGGCGATGTTCTTCTAGATTGGGACACAAGATTTAACATAGCACTCGGAACAGCCAAAGGTTTAGCGTATCTACATGAAGATTGTGATGCAAGGATTGTTCACTGCGATATAAAACCCGAGAACATCCTATTAGACGATAACTTCAATGCCAAGGTATCCGATTTCGGACTGGCGAAGCTCATGACCCGCGAACAAAGCCATGTCTTCACAACAATGCGCGGGACAAGAGGCTACTTGGCTCCAGAATGGATCACAAACTATGCGATATCAGAGAAGAGTGATGTTTACAGCTACGGAATGGTGTTGCTAGAGTTAATAGGAGGAAGAAAGAACTATGATCCATCAGAAACTTCGGAGAAATGCCATTTTCCTTCTTTTGCTTTCAAGAAGATGGAAGAAGGGAAGCTTATGGATATTGTCGATGGGAAGATGAAGAATGTTGATGTGACTGACGAAAGGGTTCAAAGGGCTATGAAAACCGCACTTTGGTGTATACAAGAAGATATGCAAACGAGACCCTCGATGAGCAAAGTTGTTCAAATGCTTGAAGGTGTTTTTCCGGTGGTCCAGCCACCTAGTTCTTCCACTATGGGATCGAGACTTTACTCAAGCTTCTTTAAGTCCATCAGCGAGGACGGCGGTGCTACTACGTCATCTGGACCGTCCGATTGTAACAGTGAGAATTATCTCTCCGCCGTGAGACTCTCCGGTCCGAGATAGCAATCTTTTTAGCCAATTTTTAGTATCTTATATAATAGGTTTTTGGCTCACCATGTTTTGTTGTATATTGTTTTTGTGTTACATCTTAAAAGAATAGCCATCACTCAGTTTTGTAACGTTCCGAGATCAATTATTTCATAGATTACCCGTCGTTTTTCTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.27667 | translated coding region predicted by ESTScan from UniGene At.27667 | MRGVFIVIVTCLVFLPDPLRAGVASIGSITPGFGGSQMNYINNDGIFLESNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSSSNMTYALEIKSGDMVLSVNSLTPQVYWSMANARERIINKDGGVVTSSSLLGNSWRFFDQKQVLLWQFVFSDNKDDNTTWIAVLGNNGVISFSNLGSGASAADSSTKIPSDLCGTPEPCGPYYVCSGSKVCGCVSGLSRARSDCKTGITSPCKKTKDNATLPLQLVSAGDGVDYFALGYAPPFSKKTDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFKTSGNGGSGFVSYIKIASTGSGGGDNGEDDGKHFPYVVIIVVVTVFIIAVLIFVAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPSSSTMGSRLYSSFFKSISEDGGATTSSGPSDCNSENYLSAVRLSGPR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF926 | 1-779 | PTHR24420:SF926 | MRGVFIVIVTCLVFLPDPLRAGVASIGSITPGFGGSQMNYINNDGIFLESNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSSSNMTYALEIKSGDMVLSVNSLTPQVYWSMANARERIINKDGGVVTSSSLLGNSWRFFDQKQVLLWQFVFSDNKDDNTTWIAVLGNNGVISFSNLGSGASAADSSTKIPSDLCGTPEPCGPYYVCSGSKVCGCVSGLSRARSDCKTGITSPCKKTKDNATLPLQLVSAGDGVDYFALGYAPPFSKKTDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFKTSGNGGSGFVSYIKIASTGSGGGDNGEDDGKHFPYVVIIVVVTVFIIAVLIFVAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPSSSTM |
| HMMPanther: PTHR24420 | 1-779 | PTHR24420,FAMILY NOT NAMED | MRGVFIVIVTCLVFLPDPLRAGVASIGSITPGFGGSQMNYINNDGIFLESNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSSSNMTYALEIKSGDMVLSVNSLTPQVYWSMANARERIINKDGGVVTSSSLLGNSWRFFDQKQVLLWQFVFSDNKDDNTTWIAVLGNNGVISFSNLGSGASAADSSTKIPSDLCGTPEPCGPYYVCSGSKVCGCVSGLSRARSDCKTGITSPCKKTKDNATLPLQLVSAGDGVDYFALGYAPPFSKKTDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFKTSGNGGSGFVSYIKIASTGSGGGDNGEDDGKHFPYVVIIVVVTVFIIAVLIFVAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPSSSTM |
| HMMPIR: PIRSF000641 IPR024171
|
3-804 | SRK S-receptor-like serine/threonine-protein kinase
|
GVFIVIVTCLVFLPDPLRAGVASIGSITPGFGGSQMNYINNDGIFLESNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSSSNMTYALEIKSGDMVLSVNSLTPQVYWSMANARERIINKDGGVVTSSSLLGNSWRFFDQKQVLLWQFVFSDNKDDNTTWIAVLGNNGVISFSNLGSGASAADSSTKIPSDLCGTPEPCGPYYVCSGSKVCGCVSGLSRARSDCKTGITSPCKKTKDNATLPLQLVSAGDGVDYFALGYAPPFSKKTDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFKTSGNGGSGFVSYIKIASTGSGGGDNGEDDGKHFPYVVIIVVVTVFIIAVLIFVAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPSSSTMGSRLYSSFFKSISEDGGATTSSGPS |
| ProfileScan: PS50927 IPR001480
|
33-148 | BULB_LECTIN Bulb-type lectin domain
|
FGGSQMNYINNDGIFLESNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFD |
| HMMSmart: SM00108 IPR001480
|
39-150 | B_lectin Bulb-type lectin domain
|
NYINNDGIFLESNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHP |
| superfamily: SSF51110 IPR001480
|
66-205 | B_lectin Bulb-type lectin domain
|
VTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSSSNMTYALEIKSGDMVLSVNSLTPQVYWSMANAR |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
72-202 | Bulb-type_lectin_dom Bulb-type lectin domain
|
SIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSSSNMTYALEIKSGDMVLSVNSLTPQVYWSMA |
| HMMPfam: PF01453 IPR001480
|
80-170 | B_lectin Bulb-type lectin domain
|
KLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSP |
| superfamily: SSF56112 IPR011009
|
465-772 | Kinase_like Protein kinase-like domain
|
ESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQ |
| Gene3D: G3DSA:3.30.200.20 | 482-567 | G3DSA:3.30.200.20 | RFAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEF |
| ProfileScan: PS50011 IPR000719
|
493-768 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
NNFSVKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVF |
| HMMPfam: PF00069 IPR017442
|
497-762 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
VKLGQGGFGSVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQ |
| PatternScan: PS00107 IPR017441
|
499-522 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGQGGFGSVYEGTLPDGSRLAVKK |
| Gene3D: G3DSA:1.10.510.10 | 571-766 | G3DSA:1.10.510.10 | GSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEG |
| PatternScan: PS00108 IPR008271
|
614-626 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IVHCDIKPENILL |
List of Contributions
There has not been any contribution yet.
