PRGDB00066375 (At.35272)
| At.35272 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 145337387 (NM_105742) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ACTTTCGTTTCAAATCTAAATCCTTCCTCGCATAAACTCTTCCCTGAATCAAAAACCCATTCTAATAAAAACAAAGACGATCTCAAACACGCTTCTTCTTCTTCCTCATTCCTCAATCATCCCTAAGACGTCACCTCACTTAAACCCAATCCAACGCCGCCGAACCAAAATCAACTTCTTCGGTTCTTCCCCAATTCAATACTACTTTCTGGGTCGTCGTTAAATCCCTAAATCTCTCTCTGTTGTTACCTTCCCATGGGATGGTCACTAAGAACTCTCATAAGAGCAATCTGGGCATGACAAAGTCCATGAATTTCTTTCAGAACATCATTAAACCTTTCAAACGCAGCTCCAATCGAGGTCTTGAAGATGATATTGAGCGAATTGCTGCTATGGAGCAAAAAGTTTTCCCATTTCAAGTTTTAGTTTCCGCTACCAAAGATTTTCACCCGACCCATAAACTCGGTGAAGGTGGTTTCGGTCCCGTCTTCAAGGGAAGATTACCTGACGGGAGAGACATAGCAGTGAAGAAGCTATCTCAGGTTTCAAGGCAAGGCAAAAACGAGTTTGTGAACGAGGCTAAGTTGTTGGCTAAAGTTCAGCATCGCAATGTTGTTAATCTTTGGGGTTATTGTACACATGGAGATGATAAGCTCTTGGTTTATGAGTATGTCGTTAATGAGAGCCTCGACAAGGTCCTCTTCAAATCCAACAGAAAATCGGAGATAGATTGGAAGCAGAGGTTTGAGATCATAACAGGCATTGCTCGAGGACTGCTCTATCTACATGAAGACGCGCCAAACTGCATCATCCACAGGGATATTAAGGCTGGCAATATTTTGCTGGATGAAAAATGGGTTCCTAAGATTGCAGATTTTGGGATGGCTAGACTCTATCAGGAAGATGTAACACATGTCAACACTCGTGTTGCAGGAACCAATGGTTATATGGCGCCAGAGTACGTAATGCACGGGGTTCTATCGGTAAAGGCAGACGTATTCAGCTTTGGGGTTTTGGTTCTGGAGCTCGTAAGTGGACAGAAGAACTCGAGTTTTAGCATGAGACACCCTGACCAGACTCTTCTTGAATGGGCATTTAAGTTGTACAAGAAAGGCCGGACCATGGAGATACTAGACCAAGATATAGCAGCTTCAGCTGATCCAGATCAAGTCAAACTCTGTGTACAGATCGGACTACTCTGCGTTCAAGGCGATCCGCATCAAAGACCGAGCATGAGACGGGTATCTCTACTTCTCTCTAGAAAACCAGGACATCTAGAAGAACCGGATCATCCTGGTGTCCCGGGATCTAGATACCGTCGGCGAACACAACGTCCTTCAGGAGCAGCATCACTTGGAACATTGTCGACCACTGGTTCCAGCACAGATTCTTTCGGTTCAAACCTGAACACAAACACGGGAACTGGTGTTAGAGGTACCCCCGCATCTTCTAAAGCTTCAACTCGGAGTAATGCCACTAGAAGTGCTGGTCAGAGCTCTAGCTCAGACCCTCACGGGAAACGACATATGAGTTATTGAAGTACATAAAATCTGGTCATAGGTGATTGTAAATAGCGAGCTGCATATATAATATTTGTTTCataatttatttaattttgcttttgaaaagtaaattaatttatttttttGACTGCAGTAGTGATTTAGTTTTGTAGTATGATTTGTTATATTAGCGGGAAAAAATTATGATTCATTTGTTACATTTGTATATTAGAATAATCACTTGTAGTCCC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.35272 | translated coding region predicted by ESTScan from UniGene At.35272 | MVTKNSHKSNLGMTKSMNFFQNIIKPFKRSSNRGLEDDIERIAAMEQKVFPFQVLVSATKDFHPTHKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWGYCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPGHLEEPDHPGVPGSRYRRRTQRPSGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPASSKASTRSNATRSAGQSSSSDPHGKRHMSY |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF787 | 13-404 | PTHR24420:SF787 | MTKSMNFFQNIIKPFKRSSNRGLEDDIERIAAMEQKVFPFQVLVSATKDFHPTHKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWGYCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPGHLEEPDHPGVPGSRYRRRTQRPSGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPASSKASTRSN |
| HMMPanther: PTHR24420 | 13-404 | PTHR24420,FAMILY NOT NAMED | MTKSMNFFQNIIKPFKRSSNRGLEDDIERIAAMEQKVFPFQVLVSATKDFHPTHKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWGYCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPGHLEEPDHPGVPGSRYRRRTQRPSGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPASSKASTRSN |
| superfamily: SSF56112 IPR011009
|
32-340 | Kinase_like Protein kinase-like domain
|
NRGLEDDIERIAAMEQKVFPFQVLVSATKDFHPTHKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWGYCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPGHLE |
| Gene3D: G3DSA:3.30.200.20 | 47-123 | G3DSA:3.30.200.20 | QKVFPFQVLVSATKDFHPTHKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWG |
| ProfileScan: PS50011 IPR000719
|
62-347 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FHPTHKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWGYCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPGHLEEPDHPGV |
| HMMPfam: PF07714 IPR001245
|
65-329 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
THKLGEGGFGPVFKGRLPDGRDIAVKKLSQVSRQGKNEFVNEAKLLAKVQHRNVVNLWGYCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMRRVS |
| Gene3D: G3DSA:1.10.510.10 | 124-326 | G3DSA:1.10.510.10 | YCTHGDDKLLVYEYVVNESLDKVLFKSNRKSEIDWKQRFEIITGIARGLLYLHEDAPNCIIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSVKADVFSFGVLVLELVSGQKNSSFSMRHPDQTLLEWAFKLYKKGRTMEILDQDIAASADPDQVKLCVQIGLLCVQGDPHQRPSMR |
| PatternScan: PS00108 IPR008271
|
183-195 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKAGNILL |
List of Contributions
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