PRGDB00066377 (At.35295)
| At.35295 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 145337375 (NM_105720) |
| Gene Class | RLK-GNK2 |
| Domain Type | Ser-Thr Kinase, GNK2 |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
CTTTCTTCACAACTTGAAACAGAACACAAAACCCTTGATGAGGGAATAAAAAAAGGAGATCTCTTTCTCAATCAAACAAAACAAAATGAAGAAAGAACCTGTCCATATCCTTCCTCTGTACCTTCCATGTCTCTTGATGTTTCTTCTTTCATCACTCCGTCAAATCACCGGAGACGCAAGGGCTAGAGCCGTTAAAGTCACTTGCTCACCTTTGCTTGAGCACAACGAAACCGCTTATGTCCCAAATTTCGTAGCCACAATGGAGAAAATCAGCACACAAGTACAAACTTCCGGTTTTGGAGTTGCTCTCACCGGTACAGGACCAGACGCTAACTATGGTCTTGCGCAGTGCTATGGTGATCTTCCTTTAAACGATTGTGTACTCTGTTACGCGGAAGCAAGGACGATGCTTCCGCAGTGTTATCCTCAGAACGGAGGTAGAATCTTTCTTGATGGATGTTTTATGAGAGCTGAGAATTATAGTTTCTATAATGAATACAAAGGACCTGAAGATAGCATCGTATGTGGAAACACGACGAGAAAGAATAAGACTTTTGGTGATGCGGTGAGACAAGGGCTGAGAAATGCTGTTACTGAGGCTTCTGGGACTGGAGGGTACGCTCGTGCGTCTGCAAAGGCGGGTGAATCTGAATCTGAATCAGCGTTTGTGTTGGCGAATTGTTGGAGAACTTTGAGTCCTGATTCTTGTAAACAGTGTTTGGAGAATGCCTCTGCTTCTGTGGTTAAAGGATGTTTGCCATGGTCAGAAGGACGTGCGCTTCACACTGGATGTTTCCTTCGGTACTCTGATCAAGATTTCTTGAATAAGATACCAAGAAACGGAAGATCAAGAGGCTCTGTGGTAGTGATTGTGGTGTCAGTACTTAGCTCTGTGGTTGTCTTCATGATTGGAGTAGCAGTAAGTGTTTATATCTGCAAACGTCGGACCATAAAGAGGAAGAGAAGAGGATCAAAAGATGTTGAGAAAATGGCGAAAACACTAAAAGACAGTAGCTTGAATTTCAAATACTCAACACTAGAGAAAGCCACAGGTTCTTTTGACAACGCGAACAAGCTTGGACAAGGCGGATTTGGAACTGTCTATAAGGGGGTTCTTCCAGACGGAAGAGATATCGCTGTGAAGCGGTTATTCTTTAACAACAGACATAGAGCAACCGATTTCTACAATGAAGTCAACATGATCAGCACTGTTGAACATAAGAACCTTGTTAGGCTGCTTGGTTGCAGCTGCTCAGGACCAGAGAGTCTCCTTGTCTATGAATACCTTCAGAACAAGAGCCTTGATCGATTCATCTTTGACGTGAACAGAGGGAAAACATTAGACTGGCAGAGAAGATACACGATCATCGTTGGAACCGCTGAAGGATTGGTGTATCTGCATGAGCAGTCGTCTGTGAAAATTATTCACAGAGACATAAAAGCAAGTAATATTCTGCTAGATTCAAAGCTTCAAGCTAAAATCGCCGATTTTGGTCTGGCGAGATCATTCCAGGACGATAAGAGCCATATTAGCACTGCCATTGCAGGGACCTTAGGTTATATGGCTCCGGAGTACTTAGCACATGGTCAGCTAACAGAGATGGTAGACGTTTACAGCTTTGGAGTTCTTGTACTAGAGATTGTAACTGGAAAACAGAACACCAAAAGCAAAATGTCAGATTACTCAGACAGTTTGATCACAGAGGCATGGAAGCATTTTCAGTCAGGAGAGTTGGAGAAAATATATGATCCAAACCTCGATTGGAAGAGTCAGTATGACAGTCACATCATCAAGAAAGAGATAGCAAGAGTTGTTCAAATAGGGCTATTGTGCACTCAAGAGATCCCTTCGCTAAGACCACCGATGTCTAAGTTATTACATATGCTAAAGAACAAAGAGGAGGTCTTGCCATTGCCGAGTAATCCTCCGTTTATGGATGAAAGAGTCATGGAACTTCGAGATGGTTCTGATGGTGATTCAGCTGGTTGTGCATCTCTTGCCACTGTCTCACAAAGTTCCTTTTATGGTAGATGAGCTTTGAAGAAGTGTATAAGAAGAAGAGAATACAAAATCTTTGATCTTTGAGCAGAAACTAAAATTTTGTGTATAAACCAGTGAGAGAAGCTAGATAGTATAGGTAAGTTATATCTTATGTATCATACTTGATAACaaaaaaaaaGTACTCAATAATTC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.35295 | translated coding region predicted by ESTScan from UniGene At.35295 | MKKEPVHILPLYLPCLLMFLLSSLRQITGDARARAVKVTCSPLLEHNETAYVPNFVATMEKISTQVQTSGFGVALTGTGPDANYGLAQCYGDLPLNDCVLCYAEARTMLPQCYPQNGGRIFLDGCFMRAENYSFYNEYKGPEDSIVCGNTTRKNKTFGDAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRALHTGCFLRYSDQDFLNKIPRNGRSRGSVVVIVVSVLSSVVVFMIGVAVSVYICKRRTIKRKRRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVLPLPSNPPFMDERVMELRDGSDGDSAGCASLATVSQSSFYGR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS51473 | 33-134 | GNK2,Gnk2-homologous domain profile. | ARAVKVTCSPLLEHNETAYVPNFVATMEKISTQVQTSGFGVALTGTGPDANYGLAQCYGDLPLNDCVLCYAEARTMLPQCYPQNGGRIFLDGCFMRAENYSF |
| HMMPfam: PF01657 IPR002902
|
46-134 | Stress-antifung Gnk2-homologous domain
|
HNETAYVPNFVATMEKISTQVQTSGFGVALTGTGPDANYGLAQCYGDLPLNDCVLCYAEARTMLPQCYPQNGGRIFLDGCFMRAENYSF |
| HMMPanther: PTHR24420:SF433 | 84-628 | PTHR24420:SF433,SUBFAMILY NOT NAMED | YGLAQCYGDLPLNDCVLCYAEARTMLPQCYPQNGGRIFLDGCFMRAENYSFYNEYKGPEDSIVCGNTTRKNKTFGDAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRALHTGCFLRYSDQDFLNKIPRNGRSRGSVVVIVVSVLSSVVVFMIGVAVSVYICKRRTIKRKRRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVLPLPSNPPFMDERVMELRDGS |
| HMMPanther: PTHR24420 | 84-628 | PTHR24420,FAMILY NOT NAMED | YGLAQCYGDLPLNDCVLCYAEARTMLPQCYPQNGGRIFLDGCFMRAENYSFYNEYKGPEDSIVCGNTTRKNKTFGDAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRALHTGCFLRYSDQDFLNKIPRNGRSRGSVVVIVVSVLSSVVVFMIGVAVSVYICKRRTIKRKRRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVLPLPSNPPFMDERVMELRDGS |
| ProfileScan: PS51473 | 139-245 | GNK2,Gnk2-homologous domain profile. | KGPEDSIVCGNTTRKNKTFGDAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRALHTGCFLRYSDQDF |
| HMMPfam: PF01657 IPR002902
|
147-245 | Stress-antifung Gnk2-homologous domain
|
CGNTTRKNKTFGDAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRALHTGCFLRYSDQDF |
| Gene3D: G3DSA:2.60.120.200 IPR013320
|
248-343 | ConA_like_subgrp Concanavalin A-like lectin/glucanase, subgroup
|
KIPRNGRSRGSVVVIVVSVLSSVVVFMIGVAVSVYICKRRTIKRKRRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGV |
| superfamily: SSF56112 IPR011009
|
311-632 | Kinase_like Protein kinase-like domain
|
LNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVLPLPSNPPFMDERVMELRDGSDGDS |
| ProfileScan: PS50011 IPR000719
|
325-608 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVL |
| HMMPfam: PF00069 IPR017442
|
328-539 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
ANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLIT |
| PatternScan: PS00107 IPR017441
|
331-353 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGQGGFGTVYKGVLPDGRDIAVK |
| Gene3D: G3DSA:3.30.200.20 | 344-400 | G3DSA:3.30.200.20 | LPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEY |
| Gene3D: G3DSA:1.10.510.10 | 401-609 | G3DSA:1.10.510.10 | LQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVLP |
| PatternScan: PS00108 IPR008271
|
446-458 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKASNILL |
List of Contributions
There has not been any contribution yet.
