PRGDB00066393 (At.36455)
| At.36455 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 30696572 (NM_104823) |
| Gene Class | RLK |
| Domain Type | Ser-Thr Kinase, Receptor-Like Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AGCTAATCTAAAAAAGATAGTTTTTGGAGAGAAATAACAAATATGGGGAAGAAGTGGATCGTGTTCTTTGCTTATTTGCTCTTATCTAGCTTCTTTATAAGTTCTAGCTCTGCAGGGATAACGAAAGAAAGTCCTTTGCCAATAGGACAAACTCTCAGCTCCTCTAATGGTTTTTATGAACTGGGGTTCTTCAATTTTAATAACTCCCAGAATCAGTATGTCGGAATCTGGTTCAAGGGTATTATTCCCCGGGTGGTTGTGTGGGTGGCCAATAGAGAAAAGCCTGTTACAGATTCCACGGCAAATCTCGCTATCAGCAACAATGGAAGTCTTCTGTTATTTAATGGCAAACATGGCGTTGCATGGTCCAGTGGAGAAGCTCTTGTTTCTAACGGGTCTCGTGCAGAGCTTTCAGACACCGGAAATCTTATTGTCATAGACAATTTTTCGGGAAGAACTCTATGGCAAAGCTTTGACCATCTTGGTGATACTATGCTTCCTTCCTCAACCCTGAAGTATAACCTCGCCACTGGCGAGAAGCAGGTGTTGAGTTCTTGGAAAAGTTACACTGATCCATCGGTTGGCGACTTTGTGCTTCAGATTACGCCACAAGTGCCAACGCAGGTGCTTGTTACGAAAGGATCAACGCCTTATTATAGAAGCGGTCCATGGGCTAAAACAAGGTTCACGGGGATACCGCTAATGGATGACACATTTACAGGTCCAGTCAGCGTTCAGCAGGATACAAATGGGTCAGGATCTCTCACTTATTTAAACAGAAACGATAGACTTCAACGTACAATGCTAACATCAAAGGGCACACAGGAGTTGTCTTGGCATAATGGGACGGACTGGGTATTGAACTTTGTGGCTCCAGAACACTCATGTGATTACTACGGTGTATGTGGACCTTTTGGGTTATGTGTGAAGTCTGTTCCTCCAAAATGTACGTGTTTCAAAGGGTTTGTTCCTAAACTCATTGAGGAGTGGAAAAGAGGAAACTGGACTGGTGGTTGTGTGAGGCGTACCGAACTATATTGTCAAGGAAACTCTACTGGCAAATATGCAAACGTGTTCCATCCTGTTGCCAGGATAAAGCCTCCAGACTTTTACGAATTTGCAAGTTTTGTGAATGTTGAAGAATGCCAGAAAAGTTGCCTCCACAATTGTTCTTGCTTGGCCTTTGCTTATATCGATGGAATTGGGTGCTTAATGTGGAACCAAGACCTAATGGACGCAGTGCAATTTTCTGAAGGAGGAGAACTTCTCTCCATTCGTCTGGCACGTTCTGAACTAGGTGGAAATAAGCGCAAGAAGGCCATTACTGCTAGTATTGTGAGCCTTTCTCTTGTTGTGATAATTGCGTTTGTTGCGTTTTGTTTCTGGAGATATAGAGTGAAACATAATGCTGATATAACAACGGATGCTTCACAAGTTTCATGGAGGAATGATCTGAAACCACAAGATGTCCCAGGTTTAGATTTCTTTGATATGCATACCATTCAAACTGCCACCAATAATTTCAGTATATCAAACAAACTCGGACAAGGTGGATTTGGCCCTGTTTATAAGGGTAAGCTGCAAGATGGGAAAGAAATTGCTGTAAAACGGCTTTCTAGCAGCTCGGGCCAGGGCAAAGAGGAGTTCATGAATGAAATAGTACTCATCTCAAAACTACAACATAAAAACTTAGTTCGGATTTTGGGATGTTGCATTGAAGGAGAAGAGAAGCTATTGATTTATGAGTTCATGTTGAACAATAGCCTTGATACCTTTCTCTTCGATTCAAGAAAAAGGCTTGAGATTGACTGGCCAAAGAGATTGGATATCATTCAAGGTATTGCGCGTGGAATTCACTATCTCCATCGTGACTCACACCTCAAGGTTATTCACCGAGATCTGAAGGTTAGCAATATTCTTCTTGACGAGAAGATGAATCCAAAGATATCAGATTTTGGATTGGCTCGGATGTATCAGGGAACCGAATATCAGGACAATACTCGCAGGGTTGTAGGAACTCTAGGATATATGGCTCCTGAGTATGCATGGACTGGGATGTTTTCTGAAAAGTCCGACATCTATAGCTTTGGAGTTCTAATGTTAGAAATCATAAGCGGGGAGAAGATCTCAAGATTCAGCTATGGCAAAGAAGAAAAAACCCTTATTGCATATGCGTGGGAATCTTGGTGTGATACTGGAGGAATTGATCTCTTGGACAAAGATGTCGCCGATTCATGTCGCCCACTGGAAGTTGAGAGATGTGTTCAGATCGGTCTGCTCTGTGTTCAACACCAACCTGCAGATAGACCCAACACACTTGAGTTGCTGTCTATGCTCACCACAACATCAGATCTTCCACCACCAGAACAACCGACATTTGTAGTGCACAGGAGAGATGACAAATCATCGTCTGAGGATTTGATCACTGTGAATGAGATGACAAAGTCTGTGATCTTAGGGCGTTAAGAAATGATGTTTGATCTTAGGGCGTTGATAACAAACTTCACCTTTTATTCTTTTTGTAACATATTTTTTGTATACATGAACCTCCATTCTGGTGCAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.36455 | translated coding region predicted by ESTScan from UniGene At.36455 | MGKKWIVFFAYLLLSSFFISSSSAGITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQITPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYLNRNDRLQRTMLTSKGTQELSWHNGTDWVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCFKGFVPKLIEEWKRGNWTGGCVRRTELYCQGNSTGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCFWRYRVKHNADITTDASQVSWRNDLKPQDVPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPPPEQPTFVVHRRDDKSSSEDLITVNEMTKSVILGR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF720 | 1-807 | PTHR24420:SF720 | MGKKWIVFFAYLLLSSFFISSSSAGITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQITPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYLNRNDRLQRTMLTSKGTQELSWHNGTDWVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCFKGFVPKLIEEWKRGNWTGGCVRRTELYCQGNSTGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCFWRYRVKHNADITTDASQVSWRNDLKPQDVPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPPPEQPTFVVHRRDDKSSSEDLITVNEMTKSVILGR |
| HMMPanther: PTHR24420 | 1-807 | PTHR24420,FAMILY NOT NAMED | MGKKWIVFFAYLLLSSFFISSSSAGITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQITPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYLNRNDRLQRTMLTSKGTQELSWHNGTDWVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCFKGFVPKLIEEWKRGNWTGGCVRRTELYCQGNSTGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCFWRYRVKHNADITTDASQVSWRNDLKPQDVPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPPPEQPTFVVHRRDDKSSSEDLITVNEMTKSVILGR |
| HMMPIR: PIRSF000641 IPR024171
|
2-807 | SRK S-receptor-like serine/threonine-protein kinase
|
GKKWIVFFAYLLLSSFFISSSSAGITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQITPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYLNRNDRLQRTMLTSKGTQELSWHNGTDWVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCFKGFVPKLIEEWKRGNWTGGCVRRTELYCQGNSTGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCFWRYRVKHNADITTDASQVSWRNDLKPQDVPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPPPEQPTFVVHRRDDKSSSEDLITVNEMTKSVILGR |
| ProfileScan: PS50927 IPR001480
|
23-144 | BULB_LECTIN Bulb-type lectin domain
|
SAGITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSF |
| HMMSmart: SM00108 IPR001480
|
29-147 | B_lectin Bulb-type lectin domain
|
ESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHL |
| superfamily: SSF51110 IPR001480
|
54-212 | B_lectin Bulb-type lectin domain
|
NSQNQYVGIWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQITPQVPTQVLVTKGSTPYYRSGPWAK |
| HMMPfam: PF01453 IPR001480
|
70-179 | B_lectin Bulb-type lectin domain
|
RVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPS |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
70-149 | Bulb-type_lectin_dom Bulb-type lectin domain
|
RVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTGNLIVIDNFSGRTLWQSFDHLGD |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
181-216 | Bulb-type_lectin_dom Bulb-type lectin domain
|
GDFVLQITPQVPTQVLVTKGSTPYYRSGPWAKTRFT |
| HMMPfam: PF00954 IPR000858
|
205-311 | S_locus_glycop S-locus glycoprotein
|
YRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYLNRNDRLQRTMLTSKGTQELSWHNGTDWVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCFKGFVPK |
| ProfileScan: PS50948 IPR003609
|
333-413 | PAN Apple-like
|
CQGNSTGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSEGGELLSIRL |
| HMMSmart: SM00473 IPR003609
|
338-413 | PAN_AP Apple-like
|
TGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSEGGELLSIRL |
| HMMPfam: PF08276 IPR013227
|
342-398 | PAN_2 PAN-2 domain
|
ANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMD |
| superfamily: SSF56112 IPR011009
|
466-788 | Kinase_like Protein kinase-like domain
|
SWRNDLKPQDVPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPPPEQPTFVVHRRDDKS |
| Gene3D: G3DSA:3.30.200.20 | 480-556 | G3DSA:3.30.200.20 | DFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGC |
| ProfileScan: PS50011 IPR000719
|
494-779 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPPPEQPTF |
| HMMPfam: PF07714 IPR001245
|
496-762 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
ISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELL |
| Gene3D: G3DSA:1.10.510.10 | 557-770 | G3DSA:1.10.510.10 | CIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCVQIGLLCVQHQPADRPNTLELLSMLTTTSD |
| PatternScan: PS00108 IPR008271
|
615-627 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIHRDLKVSNILL |
| HMMPfam: PF11883 IPR021820
|
766-807 | DUF3403 S-locus receptor kinase, C-terminal
|
TTTSDLPPPEQPTFVVHRRDDKSSSEDLITVNEMTKSVILGR |
List of Contributions
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