PRGDB00066540 (At.43483)

At.43483
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	79352580 (NM_102380)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Arabidopsis thaliana
	Comment?

Arabidopsis thaliana PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10); ATP binding

DNA Sequence

TTCTAATAGCTCACTGTAGAGTTGGGTTTTGACTAGCAGAGGAAATTTTTGGTGAAGTGTGTGGTCTCGAAGGAAAAGCTCTTTATACAGATCCGAACAAGTTTGCATTTTTGTCATCTAATCAGATAATCTCGCTTATCTGGAATTTGCATTATTGGTGATCTGGGTTTTATCTGTTTAGTGTTGAAGCCTGTTGTCCGAGTATTTAGGGTTCAAATTATAGTACAGTGTTGAGTGATGTGTGGTTTTTAGTTGGTGCTTGGAGGTTACTGTCATACTCAAGTCTGGGAAtttttgtttcttttttgtttAATAATTTCTCTTAGTAAAGTAAGTGACGGTGTTTGTTCAATTTCAGTTTTTGATCAGAAGAGTGTTGGTGAAGAAGATGTTAGAATCTGGTCTTGGGATTTAGATGACTACACCTGCACAGGCTCCTAGGGAGGAGGTGTCACTGTCTCCATCATTGGCGTCCCCTCCACTAATGGCGTTGCCTCCACCGCAGCCTTCGTTTCCCGGTGATAATGCCACTTCCCCAACTAGAGAGCCCACTAATGGCAATCCACCAGAGACCACAAACACCCCAGCTCAGTCTTCTCCTCCTCCTGAGACTCCACTATCATCACCACCACCAGAACCTTCTCCCCCATCACCTTCACTAACTGGACCTCCTCCGACGACGATTCCAGTATCTCCTCCACCAGAACCTTCTCCCCCACCACCTTTACCAACTGAAGCTCCTCCTCCAGCGAATCCAGTATCATCACCTCCACCAGAATCTTCTCCCCCGCCACCTCCACCAACTGAAGCTCCTCCTACTACTCCTATTACATCACCCAGCCCGCCAACAAATCCACCACCACCACCGGAAAGCCCTCCTTCACTACCTGCACCAGACCCTCCAAGCAATCCACTTCCACCACCTAAGTTAGTCCCACCATCACATTCACCTCCACGTCATTTACCTTCCCCGCCAGCCTCAGAAATTCCTCCTCCTCCACGTCATTTACCTTCCCCACCAGCCTCAGAACGTCCTTCAACTCCTCCATCAGATTCAGAACATCCTTCTCCTCCTCCTCCAGGGCATCCAAAACGTCGTGAGCAACCTCCTCCACCGGGTTCTAAACGTCCTACTCCATCACCTCCTTCTCCAAGTGACTCAAAACGTCCTGTGCATCCTTCACCTCCTTCTCCACCAGAGGAAACTCTCCCACCTCCCAAGCCAAGTCCAGATCCCTTACCTTCTAATTCGTCTTCACCACCAACATTGCTTCCACCATCGTCAGTTGTATCCCCGCCTTCGCCTCCTCGAAAATCTGTGTCAGGTCCTGATAATCCATCTCCAAACAACCCCACTCCTGTGACAGATAATTCCAGCAGTTCTGGTATTAGTATAGCGGCTGTTGTGGGTGTAAGTATTGGAGTGGCCCTTGTGCTGCTTACTCTCATTGGAGTTGTTGTCTGTTGCTTAAAGAAACGGAAAAAGAGGCTCTCAACCATTGGTGGTGGCTATGTTATGCCAACACCTATGGAATCCTCCTCCCCAAGATCAGATTCAGCGCTTCTGAAGACGCAGTCATCCGCACCTCTAGTGGGAAATCGTTCTAGCAATCGTACATACTTATCACAATCAGAGCCTGGTGGTTTTGGTCAATCGAGGGAACTGTTCTCATATGAAGAACTTGTCATAGCAACAAATGGATTCTCTGATGAAAATCTCTTGGGTGAAGGTGGATTTGGTCGTGTGTATAAAGGAGTTTTACCAGATGAAAGAGTGGTTGCTGTGAAACAATTAAAAATAGGTGGAGGACAAGGTGACCGAGAGTTCAAAGCCGAGGTTGATACCATAAGCAGGGTACATCACCGGAATTTGCTTTCTATGGTTGGATACTGCATTTCCGAGAACCGGAGATTGCTTATTTATGATTATGTCCCTAACAACAACCTTTACTTCCATCTTCACGCCGCAGGAACTCCGGGTCTAGACTGGGCAACACGTGTTAAAATTGCTGCTGGTGCGGCTCGTGGACTAGCTTATCTCCATGAAGATTGTCACCCTCGTATCATACATAGGGACATCAAATCATCCAACATTCTCTTAGAAAATAACTTCCATGCCCTGGTTTCTGACTTCGGCCTTGCAAAGCTAGCTCTCGACTGTAACACACATATTACAACTCGGGTCATGGGAACATTCGGCTACATGGCTCCGGAATATGCATCAAGTGGCAAATTAACCGAGAAATCAGACGTATTCTCCTTTGGGGTTGTTCTACTGGAGTTAATCACTGGACGTAAGCCTGTGGATGCATCCCAACCTCTGGGAGATGAGAGCCTTGTTGAATGGGCTCGTCCTTTGCTTAGTAATGCCACTGAAACCGAAGAGTTTACAGCTTTAGCAGATCCCAAGCTAGGTAGAAACTATGTTGGTGTTGAAATGTTTAGAATGATTGAAGCAGCGGCAGCTTGTATTCGCCATTCAGCTACAAAGAGACCCCGAATGAGTCAAATTGTGAGAGCTTTCGACAGTCTAGCTGAGGAAGACCTCACCAATGGAATGAGACTAGGCGAAAGCGAAATAATCAACTCAGCTCAACAGTCTGCAGAAATCAGATTGTTTAGAAGAATGGCTTTTGGCAGCCAAAACTACAGTACAGATTCTTTAACTCGTAATAGTTATATAAGCAAAGATGAAAACTTGTAAATATGAGAAACAAAACACATTGCAGAATGATTTTTCTGAGGAAGAGATCTCAAAGCAGAACCTTTCTTGATTAACTTCAAATTGGGATCCTCAGTTTCCTCTCTGCCGATACTATTGCAGAAACAGCGGGTTTTGGAATATTATGTGGATGAACATATTTGC

Protein sequences

Name	Description	Sequence
At.43483	translated coding region predicted by ESTScan from UniGene At.43483	MTTPAQAPREEVSLSPSLASPPLMALPPPQPSFPGDNATSPTREPTNGNPPETTNTPAQSSPPPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPSNPLPPPKLVPPSHSPPRHLPSPPASEIPPPPRHLPSPPASERPSTPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVLLTLIGVVVCCLKKRKKRLSTIGGGYVMPTPMESSSPRSDSALLKTQSSAPLVGNRSSNRTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYSTDSLTRNSYISKDENL

Domains

Domain	Start-End	Description	Sequence
FPrintScan: PR01217	29-50	PRICHEXTENSN,Proline rich extensin signature	PQPSFPGDNATSPTREPTNGNP
FPrintScan: PR01217	56-72	PRICHEXTENSN,Proline rich extensin signature	TPAQSSPPPETPLSSPP
FPrintScan: PR01217	74-91	PRICHEXTENSN,Proline rich extensin signature	EPSPPSPSLTGPPPTTIP
FPrintScan: PR01217	98-123	PRICHEXTENSN,Proline rich extensin signature	PSPPPPLPTEAPPPANPVSSPPPESS
HMMPanther: PTHR24420	245-762	PTHR24420,FAMILY NOT NAMED	SPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVLLTLIGVVVCCLKKRKKRLSTIGGGYVMPTPMESSSPRSDSALLKTQSSAPLVGNRSSNRTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYSTDSLTRNSYISKDENL
HMMPanther: PTHR24420:SF644	245-762	PTHR24420:SF644	SPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVLLTLIGVVVCCLKKRKKRLSTIGGGYVMPTPMESSSPRSDSALLKTQSSAPLVGNRSSNRTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYSTDSLTRNSYISKDENL
superfamily: SSF56112 IPR011009	400-703	Kinase_like Protein kinase-like domain	RTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAF
Gene3D: G3DSA:3.30.200.20	415-506	G3DSA:3.30.200.20	RELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYV
ProfileScan: PS50011 IPR000719	430-706	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	FSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSL
HMMPfam: PF00069 IPR017442	433-701	Pkinase,Ser-thr Serine/threonine-protein kinase-like domain	ENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVR
PatternScan: PS00107 IPR017441	436-458	PROTEIN_KINASE_ATP Protein kinase, ATP binding site	LGEGGFGRVYKGVLPDERVVAVK
Gene3D: G3DSA:1.10.510.10	509-703	G3DSA:1.10.510.10	NNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAF
PatternScan: PS00108 IPR008271	550-562	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	IIHRDIKSSNILL

List of Contributions

There has not been any contribution yet.

Add a Contribution

Analyses

Blast

Blast matches against Reference R-Genes. Show