PRGDB00066540 (At.43483)
At.43483 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 79352580 (NM_102380) |
Gene Class | Unknown |
Domain Type | Ser-Thr Kinase |
Gene Species | Arabidopsis thaliana |
DNA Sequence
TTCTAATAGCTCACTGTAGAGTTGGGTTTTGACTAGCAGAGGAAATTTTTGGTGAAGTGTGTGGTCTCGAAGGAAAAGCTCTTTATACAGATCCGAACAAGTTTGCATTTTTGTCATCTAATCAGATAATCTCGCTTATCTGGAATTTGCATTATTGGTGATCTGGGTTTTATCTGTTTAGTGTTGAAGCCTGTTGTCCGAGTATTTAGGGTTCAAATTATAGTACAGTGTTGAGTGATGTGTGGTTTTTAGTTGGTGCTTGGAGGTTACTGTCATACTCAAGTCTGGGAAtttttgtttcttttttgtttAATAATTTCTCTTAGTAAAGTAAGTGACGGTGTTTGTTCAATTTCAGTTTTTGATCAGAAGAGTGTTGGTGAAGAAGATGTTAGAATCTGGTCTTGGGATTTAGATGACTACACCTGCACAGGCTCCTAGGGAGGAGGTGTCACTGTCTCCATCATTGGCGTCCCCTCCACTAATGGCGTTGCCTCCACCGCAGCCTTCGTTTCCCGGTGATAATGCCACTTCCCCAACTAGAGAGCCCACTAATGGCAATCCACCAGAGACCACAAACACCCCAGCTCAGTCTTCTCCTCCTCCTGAGACTCCACTATCATCACCACCACCAGAACCTTCTCCCCCATCACCTTCACTAACTGGACCTCCTCCGACGACGATTCCAGTATCTCCTCCACCAGAACCTTCTCCCCCACCACCTTTACCAACTGAAGCTCCTCCTCCAGCGAATCCAGTATCATCACCTCCACCAGAATCTTCTCCCCCGCCACCTCCACCAACTGAAGCTCCTCCTACTACTCCTATTACATCACCCAGCCCGCCAACAAATCCACCACCACCACCGGAAAGCCCTCCTTCACTACCTGCACCAGACCCTCCAAGCAATCCACTTCCACCACCTAAGTTAGTCCCACCATCACATTCACCTCCACGTCATTTACCTTCCCCGCCAGCCTCAGAAATTCCTCCTCCTCCACGTCATTTACCTTCCCCACCAGCCTCAGAACGTCCTTCAACTCCTCCATCAGATTCAGAACATCCTTCTCCTCCTCCTCCAGGGCATCCAAAACGTCGTGAGCAACCTCCTCCACCGGGTTCTAAACGTCCTACTCCATCACCTCCTTCTCCAAGTGACTCAAAACGTCCTGTGCATCCTTCACCTCCTTCTCCACCAGAGGAAACTCTCCCACCTCCCAAGCCAAGTCCAGATCCCTTACCTTCTAATTCGTCTTCACCACCAACATTGCTTCCACCATCGTCAGTTGTATCCCCGCCTTCGCCTCCTCGAAAATCTGTGTCAGGTCCTGATAATCCATCTCCAAACAACCCCACTCCTGTGACAGATAATTCCAGCAGTTCTGGTATTAGTATAGCGGCTGTTGTGGGTGTAAGTATTGGAGTGGCCCTTGTGCTGCTTACTCTCATTGGAGTTGTTGTCTGTTGCTTAAAGAAACGGAAAAAGAGGCTCTCAACCATTGGTGGTGGCTATGTTATGCCAACACCTATGGAATCCTCCTCCCCAAGATCAGATTCAGCGCTTCTGAAGACGCAGTCATCCGCACCTCTAGTGGGAAATCGTTCTAGCAATCGTACATACTTATCACAATCAGAGCCTGGTGGTTTTGGTCAATCGAGGGAACTGTTCTCATATGAAGAACTTGTCATAGCAACAAATGGATTCTCTGATGAAAATCTCTTGGGTGAAGGTGGATTTGGTCGTGTGTATAAAGGAGTTTTACCAGATGAAAGAGTGGTTGCTGTGAAACAATTAAAAATAGGTGGAGGACAAGGTGACCGAGAGTTCAAAGCCGAGGTTGATACCATAAGCAGGGTACATCACCGGAATTTGCTTTCTATGGTTGGATACTGCATTTCCGAGAACCGGAGATTGCTTATTTATGATTATGTCCCTAACAACAACCTTTACTTCCATCTTCACGCCGCAGGAACTCCGGGTCTAGACTGGGCAACACGTGTTAAAATTGCTGCTGGTGCGGCTCGTGGACTAGCTTATCTCCATGAAGATTGTCACCCTCGTATCATACATAGGGACATCAAATCATCCAACATTCTCTTAGAAAATAACTTCCATGCCCTGGTTTCTGACTTCGGCCTTGCAAAGCTAGCTCTCGACTGTAACACACATATTACAACTCGGGTCATGGGAACATTCGGCTACATGGCTCCGGAATATGCATCAAGTGGCAAATTAACCGAGAAATCAGACGTATTCTCCTTTGGGGTTGTTCTACTGGAGTTAATCACTGGACGTAAGCCTGTGGATGCATCCCAACCTCTGGGAGATGAGAGCCTTGTTGAATGGGCTCGTCCTTTGCTTAGTAATGCCACTGAAACCGAAGAGTTTACAGCTTTAGCAGATCCCAAGCTAGGTAGAAACTATGTTGGTGTTGAAATGTTTAGAATGATTGAAGCAGCGGCAGCTTGTATTCGCCATTCAGCTACAAAGAGACCCCGAATGAGTCAAATTGTGAGAGCTTTCGACAGTCTAGCTGAGGAAGACCTCACCAATGGAATGAGACTAGGCGAAAGCGAAATAATCAACTCAGCTCAACAGTCTGCAGAAATCAGATTGTTTAGAAGAATGGCTTTTGGCAGCCAAAACTACAGTACAGATTCTTTAACTCGTAATAGTTATATAAGCAAAGATGAAAACTTGTAAATATGAGAAACAAAACACATTGCAGAATGATTTTTCTGAGGAAGAGATCTCAAAGCAGAACCTTTCTTGATTAACTTCAAATTGGGATCCTCAGTTTCCTCTCTGCCGATACTATTGCAGAAACAGCGGGTTTTGGAATATTATGTGGATGAACATATTTGC
Protein sequences
Name | Description | Sequence |
---|---|---|
At.43483 | translated coding region predicted by ESTScan from UniGene At.43483 | MTTPAQAPREEVSLSPSLASPPLMALPPPQPSFPGDNATSPTREPTNGNPPETTNTPAQSSPPPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPSNPLPPPKLVPPSHSPPRHLPSPPASEIPPPPRHLPSPPASERPSTPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVLLTLIGVVVCCLKKRKKRLSTIGGGYVMPTPMESSSPRSDSALLKTQSSAPLVGNRSSNRTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYSTDSLTRNSYISKDENL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
FPrintScan: PR01217 | 29-50 | PRICHEXTENSN,Proline rich extensin signature | PQPSFPGDNATSPTREPTNGNP |
FPrintScan: PR01217 | 56-72 | PRICHEXTENSN,Proline rich extensin signature | TPAQSSPPPETPLSSPP |
FPrintScan: PR01217 | 74-91 | PRICHEXTENSN,Proline rich extensin signature | EPSPPSPSLTGPPPTTIP |
FPrintScan: PR01217 | 98-123 | PRICHEXTENSN,Proline rich extensin signature | PSPPPPLPTEAPPPANPVSSPPPESS |
HMMPanther: PTHR24420 | 245-762 | PTHR24420,FAMILY NOT NAMED | SPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVLLTLIGVVVCCLKKRKKRLSTIGGGYVMPTPMESSSPRSDSALLKTQSSAPLVGNRSSNRTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYSTDSLTRNSYISKDENL |
HMMPanther: PTHR24420:SF644 | 245-762 | PTHR24420:SF644 | SPSDSKRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSSSGISIAAVVGVSIGVALVLLTLIGVVVCCLKKRKKRLSTIGGGYVMPTPMESSSPRSDSALLKTQSSAPLVGNRSSNRTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYSTDSLTRNSYISKDENL |
superfamily: SSF56112 IPR011009
|
400-703 | Kinase_like Protein kinase-like domain
|
RTYLSQSEPGGFGQSRELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAF |
Gene3D: G3DSA:3.30.200.20 | 415-506 | G3DSA:3.30.200.20 | RELFSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYV |
ProfileScan: PS50011 IPR000719
|
430-706 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSL |
HMMPfam: PF00069 IPR017442
|
433-701 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
ENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDTISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVR |
PatternScan: PS00107 IPR017441
|
436-458 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGEGGFGRVYKGVLPDERVVAVK |
Gene3D: G3DSA:1.10.510.10 | 509-703 | G3DSA:1.10.510.10 | NNLYFHLHAAGTPGLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAF |
PatternScan: PS00108 IPR008271
|
550-562 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKSSNILL |
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