PRGDB00066670 (At.51233)
| At.51233 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 79472726 (NM_117388) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGAGTTGTTTCTTGGGTCCATCGACAAACAACAAAAGTAGGGAGAATGAAGGCTCATCTATGGCTGCTCCTTATGAACAACAAAACCTACCACGGAATGATCGTAGGCAGATAACAACATGGGAAGCGGTGGGAACGAACAAAGAATCACCGAAAAATATCAAGGCAAAGAGTTTCAAATTTCGTGAATTAGCAACCGCTACAAATAGTTTCAGGCAAGAGTTCTTGATCGGAGAAGGAGGGTTTGGGAGGGTTTACAAAGGAAAGATGGAGAAGACAGGACAGGTGGTAGCTGTGAAGCAACTTGACCGTAATGGATTACAAGGGAATAGAGAGTTTCTGGTAGAGATCTTCAGGTTAAGTCTTCTTCATCATCCCAACCTTGCCAATCTCATTGGATATTGCCTTGATGGAGACCAGAGACTTCTTGTTCACGAGTTCATGCCTCTTGGTTCCCTTGAAGATCATCTCCTAGATGTTGTAGTAGGACAACAACCATTGGATTGGAACTCTCGGATAAGGATTGCCTTAGGAGCCGCAAAAGGGCTCGAATATCTCCACGAAAAGGCAAACCCTCCGGTGATATATCGAGATTTCAAATCGTCAAATATATTGCTTAATGTAGATTTTGATGCAAAACTATCAGATTTTGGTTTGGCAAAACTTGGTTCGGTTGGGGACACACAAAATGTATCTTCCCGAGTAGTGGGAACTTATGGTTATTGCGCTCCTGAGTATCACAAAACCGGTCAGCTGACGGTTAAATCTGATGTATATAGTTTTGGGGTTGTGTTGTTGGAACTCATAACCGGTAAGCGAGTTATCGACACAACGAGACCATGTCATGAACAAAATCTGGTTACTTGGGCACAACCGATTTTCAGAGAACCAAATAGATTCCCCGAGCTAGCGGATCCACTTCTTCAAGGGGAGTTCCCGGAAAAAAGTTTGAACCAAGCTGTAGCAATAGCGGCAATGTGTCTACAAGAAGAACCAATAGTTCGACCTTTAATCAGTGATGTTGTCACCGCCTTAAGTTTTATGAGTACAGAAACCGGTTCACCTTCCGGTCTAACGGGAACCGCTCTTAACCCTTTATCTCCTAAGACCGTGGAGGACCAGGGCTGGCTTCAATGTGAGTCTCCAAGAGATGTGTACTCGTTACTATAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| At.51233 | translated coding region predicted by ESTScan from UniGene At.51233 | MSCFLGPSTNNKSRENEGSSMAAPYEQQNLPRNDRRQITTWEAVGTNKESPKNIKAKSFKFRELATATNSFRQEFLIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFMPLGSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDVVTALSFMSTETGSPSGLTGTALNPLSPKTVEDQGWLQCESPRDVYSLL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF56112 IPR011009
|
41-353 | Kinase_like Protein kinase-like domain
|
WEAVGTNKESPKNIKAKSFKFRELATATNSFRQEFLIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFMPLGSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDVVTALSFMSTETG |
| HMMPanther: PTHR24420 | 47-350 | PTHR24420,FAMILY NOT NAMED | NKESPKNIKAKSFKFRELATATNSFRQEFLIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFMPLGSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDVVTALSFMST |
| HMMPanther: PTHR24420:SF700 | 47-350 | PTHR24420:SF700 | NKESPKNIKAKSFKFRELATATNSFRQEFLIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFMPLGSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDVVTALSFMST |
| Gene3D: G3DSA:3.30.200.20 | 55-148 | G3DSA:3.30.200.20 | KAKSFKFRELATATNSFRQEFLIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFM |
| ProfileScan: PS50011 IPR000719
|
71-348 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FRQEFLIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFMPLGSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDVVTALSFM |
| HMMPfam: PF00069 IPR017442
|
76-341 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
LIGEGGFGRVYKGKMEKTGQVVAVKQLDRNGLQGNREFLVEIFRLSLLHHPNLANLIGYCLDGDQRLLVHEFMPLGSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDV |
| PatternScan: PS00107 IPR017441
|
77-100 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGEGGFGRVYKGKMEKTGQVVAVK |
| Gene3D: G3DSA:1.10.510.10 | 151-348 | G3DSA:1.10.510.10 | GSLEDHLLDVVVGQQPLDWNSRIRIALGAAKGLEYLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAPEYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWAQPIFREPNRFPELADPLLQGEFPEKSLNQAVAIAAMCLQEEPIVRPLISDVVTALSFM |
| PatternScan: PS00108 IPR008271
|
194-206 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIYRDFKSSNILL |
List of Contributions
There has not been any contribution yet.
