PRGDB00067106 (Bna.4153)
| Bna.4153 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 65299651 (CN829865) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Brassica napus |
DNA Sequence
CGAGAAGGCGACGGATAGCTTTAACAAGAACAGAGTTCTTGGGCAGGGAGGTCAAGGTACGGTCTACAAAGGAATGCTGGTGGATGGGCGTATCGTCGCTGTGaaaagatctaaagttttggatgaagacaaagtcgaggagttcatcaatgaagtcagtgttctcTCGCAGATTAACCATAGGAACGTCGTGAAACTCATGGGGTGTTGTCTGGAGACGGAGGTTCCTATCTTGGTTTATGAGCATATTCCAAACGGAGACTTATTCAAGCGGCTGCACGATGATTCTGATGATTACATAATGACTTGGGAAGTGCGTTTGCGGATGGCTGGGGAGATTGCAGGAGCGCTTGCTTActtgcactcggctgcatctactcctgtctatcatAGAGATATCAAGACCATAAACATACTTTTGGACGAGAAGTATCGAGCCAAAGTGTCGGATTTTGGTACTTCGAGGTCTATCAACATAGATCAGACTCACTTGACAACTCTAGTCGCAGGTACTTTCGGATACTTGGATCCGGAGTACTTTCAGACCAGCCAGTttacgaataaaagtgatgtttatagtttcggggttgtcttggttgagcttataACCGGAGAAAAATCGTTTTCTGTTATGCGGTCTGAAGAAAAAGAGGGCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Bna.4153 | translated coding region predicted by ESTScan from UniGene Bna.4153 | XEKATDSFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVMRSEEKEGX |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF56112 IPR011009
|
2-209 | Protein kinase-like (PK-like) Protein kinase-like domain
|
EKATDSFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSF |
| Gene3D: G3DSA:3.30.200.20 | 2-69 | no description | EKATDSFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMG |
| HMMPanther: PTHR24420 | 2-218 | FAMILY NOT NAMED,FAMILY NOT NAMED | EKATDSFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVMRSEEKE |
| HMMPanther: PTHR24420:SF444 | 2-218 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | EKATDSFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVMRSEEKE |
| ProfileScan: PS50011 IPR000719
|
8-220 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVMRSEEKEGX |
| HMMSmart: SM00219 IPR020635
|
8-217 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVMRSEEK |
| HMMSmart: SM00220 IPR002290
|
8-218 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVMRSEEKE |
| HMMPfam: PF00069 IPR017442
|
9-212 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
NKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVSVLSQINHRNVVKLMGCCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVM |
| Gene3D: G3DSA:1.10.510.10 | 70-212 | no description | CCLETEVPILVYEHIPNGDLFKRLHDDSDDYIMTWEVRLRMAGEIAGALAYLHSAASTPVYHRDIKTINILLDEKYRAKVSDFGTSRSINIDQTHLTTLVAGTFGYLDPEYFQTSQFTNKSDVYSFGVVLVELITGEKSFSVM |
| PatternScan: PS00108 IPR008271
|
129-141 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VYHRDIKTINILL |
List of Contributions
There has not been any contribution yet.
