PRGDB00067108 (Bna.4325)
| Bna.4325 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 65300109 (CN830323) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Brassica napus |
DNA Sequence
CTGTGGTGGTGAAGAGGCTTAAAGAAGTAGCGGCTGGGAAAAGAGAGTTCGAGCAGCAGATGGAAGCTGTGGGAAGGATCAGCCCGCACGGGAATGTAGCTCCTCTCCGTGCTTATTACTTCTCTAAAGACGAGAAGCTCCTCGTGTATGATTACTACCAAGGAGGCAACTTCTCCATGCTTCTTCACGGAAACAACGAAGGAGGAAGAGGTGCATTGGACTGGGAACAAAGGCTAAAGATCTGTTTAGGAGCTGCAAAAGGAATAGCTCACATACACTCTTCATCCGGTGCCAAGCTCCTCCACGGTAACATCAAATCACCAAACGTCCTCTTAATGCAAGACCTCAACGCCTGCGTCTCGGACTACGGCATAGCTCCTCTGATGAGCCACCACACCTTGCTCCCATCAAGAAGCTTAGGATACAGAGCGCCTGAAGCCATAGAGACACGGAAACACACTCAAAAATCCGACGTGTACAGTTTTGGCGTGCTGTTGCTCGAAATGCTGACGGGGAAAGCGGCAGGGAAGACGACGGGGCACGAGGAAGTGGTGGATTTGCCCAAGTGGGTGCAGTCGGTGGTGAGAGAGGAGTGGACTGGGGAAgtgtttgacgtggagcttataaagcagcagcacaacgttgaggaagagatggtgcagatgttgcaggtggcgatggcttgtgtgtcgaagcatccggattctaggccttccatggaggaagttgttaacatgatggaggaggtaaggccttcaaatggctctggtgctggctctggcaacagggcctcttcgcctgagatgatcagaagctctgatagcccggtttagattggttattattttctttctgaaatcattatttatttcgacttttttacttctttgggaataaaccttttcgtagttgactaattcagcatgtgatttgttctaatcattacctggaaaagtaGTGT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Bna.4325 | translated coding region predicted by ESTScan from UniGene Bna.4325 | XVVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMMEEVRPSNGSGAGSGNRASSPEMIRSSDSPV |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-250 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
XVVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMMEEV |
| HMMSmart: SM00219 IPR020635
|
1-247 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
XVVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMM |
| HMMSmart: SM00220 IPR002290
|
1-247 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
XVVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMM |
| HMMPfam: PF07714 IPR001245
|
2-246 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
VVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNM |
| Gene3D: G3DSA:3.30.200.20 | 2-55 | no description | VVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQG |
| superfamily: SSF56112 IPR011009
|
2-247 | Protein kinase-like (PK-like) Protein kinase-like domain
|
VVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMM |
| HMMPanther: PTHR24420 | 2-252 | FAMILY NOT NAMED,FAMILY NOT NAMED | VVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMMEEVRP |
| HMMPanther: PTHR24420:SF547 | 2-252 | SUBFAMILY NOT NAMED | VVVKRLKEVAAGKREFEQQMEAVGRISPHGNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMMEEVRP |
| Gene3D: G3DSA:1.10.510.10 | 60-249 | no description | MLLHGNNEGGRGALDWEQRLKICLGAAKGIAHIHSSSGAKLLHGNIKSPNVLLMQDLNACVSDYGIAPLMSHHTLLPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQVAMACVSKHPDSRPSMEEVVNMMEE |
| Seg: seg | 240-250 | seg | MEEVVNMMEEV |
| Seg: seg | 251-267 | seg | RPSNGSGAGSGNRASSP |
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