PRGDB00068007 (Ccl.20276)
| Ccl.20276 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 63068325 (CX299471) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Citrus clementina |
DNA Sequence
AGGTGCCATTGATGTTGCAAATGGCTTGCAATACATACATGAGCACACTAGGCCTAGAGTGGTACACAAAGACATCAAAAGCAGTAACATTCTCTTAGACTCAAACATGAGAGCCAAAATTGCCAACTTTGGATTAGCAAAATCTGGCTGCAATGCCATAACAATGCACATTGTTGGAACTCAAGGCTACATTGCTCCAGAGTACTTAGCAGATGGGGTAGTATCGACGAAAATGGATGTGTTCTCTTTTGGGGTGGTGTTGCTTGAGCTGATATCTGGCAAGGAAGCAATTGATGAAGAGGGGAAGGTTTTGTGGGCAAAAGTTGAAGGGATACTGGAGGGAAATGAAGAGAGGAAAGTAAAGAGAGTGAAGGAATGGATGGATGAGATTCTTTTGAAGGATTCAATCTCAATGGAGAGTGTGATGAGTGCAATGGGAATTGCCATTGCGTGTCTGCACAAAGATCCTTCGAAAAGGCCAAGTATGGTCGATATTGTGTATGCTTTGAGCAAGAGTGATGACTTGCTTTCCGACATTTCAGATGATGCATTATCATCCTCTCAGGTTTCGGCAAGATGAATCAGAATCATATTATGGTAGTAATTATGCAGGGTGTAAATAATAATAAGCATACGGGTTAAAAGCCAAAACAGGGCTGTTCTAGAACTTAAACGCTCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ccl.20276 | translated coding region predicted by ESTScan from UniGene Ccl.20276 | XGAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQVSAR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-177 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
XGAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLL |
| HMMSmart: SM00219 IPR020635
|
2-170 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
GAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYAL |
| superfamily: SSF56112 IPR011009
|
3-170 | Protein kinase-like (PK-like) Protein kinase-like domain
|
AIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYAL |
| HMMPanther: PTHR24420:SF591 | 3-171 | OS02G0681700 PROTEIN | AIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYALS |
| HMMPanther: PTHR24420 | 3-171 | FAMILY NOT NAMED,FAMILY NOT NAMED | AIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYALS |
| HMMSmart: SM00220 IPR002290
|
3-177 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
AIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLL |
| Gene3D: G3DSA:1.10.510.10 | 4-175 | no description | IDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDD |
| HMMPfam: PF00069 IPR017442
|
5-167 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
DVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV |
| PatternScan: PS00108 IPR008271
|
21-33 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VVHKDIKSSNILL |
| Seg: seg | 170-188 | seg | LSKSDDLLSDISDDALSSS |
List of Contributions
There has not been any contribution yet.
