PRGDB00068140 (Csi.6766)
| Csi.6766 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 188330217 (EY658058) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Citrus sinensis |
DNA Sequence
AATAATTTATTAAGGGAACCTGCGGTACGGGTCGGAATTCCGGGTCGACCACGCGTCCGCTTCCTCTTCAGGTCAGGTGTTTTGGAGTGGTGAAACAACAAGAACTCGTCAAACTTTAAGGTATCAGTGACATTCCAAGTAGGGAAAGATGGACTATATGTATGCACCAGGGAAGAACCATCTCTTTGTTCCGGGTCCTGTTCACATCCCCGATCAAGTCATCCGAGCAATGAATAGGAACAATGAGGACTACCGTTCTCCAGCAGTTCCAGCATTAACAAAAATTCTTCTTGAGGATGTCAAGAAAATTTTCAAGACCACTTCTGGAACTCCATTTCTGATCCCAACCACAGGAACTGGTGCATGGGAGAGTGCACTTACAAACACACTGTCTCCTGGAGATCGCATTATCTCTTTTCTGATTGGTCAATTCAGTTTGCTTTGGATTGATCAGCAGCAGCGCCTCAACTTCAACGTTGATGTCGTCGAAAAGTGACTGGGGTGAAGGTGCAAAGCTTGATGGTTTTTGGCATCAAAACTTTGCAGCAGAAACTGGACAACCTTATCAAGCCCATTTTGCATTTGTTCATAACGAAAACGCCAACCGGGAGTTACCAACAACTTGGCTaaaatgaaaaaaaaCTTCTTGGAAGAATAACAGGCCCCCGGCTTCTTTTTTCTCTTTTGAAAGGGGGTTTCCCCCCATTTTGTGGCCTCCGATTTTTCCGTAATGGGAAAGAAAATGGGGGGCTAAAAGTGGGGGCTTCTAACGGGCCTCCCACAAAAACCCCTTTCCCTTTCCCTAATGGAAAGGGGGAAGTTTTTGGGGGCAACCCCCACAAACCTTTAAGAGGGATCCCCCaaaaatggcaaaaaaaccggtgaaaaatttttttttttggttgggaaaaaaatcaacaaaaaagatttttttaaaaatttgggggaaaaattttttgtgggcactatccaccccccctcccaccccccAATCAGTTGAGAGTGGTGGGGAGGGAGGAAGAAACATCTCTTATATGAATATTTGAAAATTTTTATTTTTGAAGAGAAGAGGAGCGTGTTGTAGAACAAGTTGGGTGTGATTCATATTGTAAATGGACGGAGCCNCCC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Csi.6766 | translated coding region predicted by ESTScan from UniGene Csi.6766 | MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVEKDWGEGAKLDGFWHQNFAAETGQPYQAHFAFVHNENANRELPTTWLK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR21152:SF7 | 1-124 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVEKDWGEGAKLD |
| HMMPanther: PTHR21152 | 1-124 | FAMILY NOT NAMED,AMINOTRANSFERASE CLASS V | MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVEKDWGEGAKLD |
| superfamily: SSF53383 IPR015424
|
7-124 | PLP-dependent transferases Pyridoxal phosphate-dependent transferase, major d
|
PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVEKDWGEGAKLD |
| Gene3D: G3DSA:3.40.640.10 IPR015421
|
21-124 | no description Pyridoxal phosphate-dependent transferase, major r
|
PDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVEKDWGEGAKLD |
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