PRGDB00068428 (Ghi.7959)
| Ghi.7959 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 164329148 (ES808947) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Gossypium hirsutum |
DNA Sequence
GGCACGAGAGGTGACGACAGAAGAGGGTTGTGGAATTGGGAAGCCGAAGAAGAAGCTACTGCGATTGCGATTGCCAACTCATTCTTCCGTCATGGGCAACTGTGGCACTAGAGAGGAATCTGACGTTGTTACTCATGCTCAAGTTCAACAGCTCCACAACCACATCGTATCCGACAAGAAGCTTACTCAAAGTCAGAGCCAGACTCAGAATCGTACCCTCTCAGATCTGAGCGACTTCGAGGATTCCAGGAAAAATGCGCTTCTCTATACCCACATCATTGCCTTCACTTTATTCGAGCTTGAGACTATTACCAAGAGCTTCCGTTCTGACTATATTCTCGGGGAAGGTGGCTTCGGAACCGTCTATAAAGGTTACATTGACGAGAATGTGCGGGTCGGTCTCAAATCTCTGCCTGTCGCTGTCAAGGTCCTCAACAAGGAGGGCCTTCAGGGTCACCGCGAATGGCTTACTGAGGTCAACTTCCTCGGCCAGCTCAGGCATCCCAATCTGGTAAAGCTGATCGGTTATTGTTGTGAGGATGATCACAGGCTACTTGTATACGAATTCATGTTCCGTGGTAGTCTTGAGAACCACCTTTTTCGAAAGGCAACTGTACCTTTATCCTGGGCGAAAAGAATGATGATTGCTCTAGGAGCTGCTAAAGGGCTTGCTTTCCTACACAATGCTGAAAGACCCGTAATATATAGGGATTTTAAAACCTCCAATATATTGTTGGACTCTGATTATACAGCCAAGCTTTCTGATTTTGGACTTGCAAAAGCTGGGACCACAAGGTGATGAGACTCACGTATCAACTCGAGTGATGGGAACATATGGATATGCTGCACCTGAATATGTTATGACTGGTCATCTGACTGCGAGGAGTGATGTATACAGCTTCGGAGTTTGTTCTTTGGGAGCTTTTGACGGGAAGAAAATCTGTTGATAAGACAGAACAAAGCAGGAGCAGAATTTGGTGGATTGGGCTCGGccaaaactgaatgatagaaaaaaattactcaaataaatggaccaaaaatggaaaaaCCAGTATTCACCAAGGGCTGCCCCAAAAGGATGGAACTTTGGGAAAACTAATGGTTTTAACCCAAAATCCAAAAAACAAGGGGCCTTAAAGGGAAGGGAATTTTGGGTAAAAACCCTGGGAACCCCTTCAAAAAGGGCCCgggggggggtggggggcaaaaaaaaaaaatttcccccctcctctctttttttaaaaatccataaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ghi.7959 | translated coding region predicted by ESTScan from UniGene Ghi.7959 | XAREVTTEEGCGIGKPKKKLLRLRLPTHSSVMGNCGTREESDVVTHAQVQQLHNHIVSDKKLTQSQSQTQNRTLSDLSDFEDSRKNALLYTHIIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVCSLGAFDGKKIC |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 15-26 | seg | KPKKKLLRLRLP |
| superfamily: SSF56112 IPR011009
|
80-304 | Protein kinase-like (PK-like) Protein kinase-like domain
|
FEDSRKNALLYTHIIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVC |
| Gene3D: G3DSA:3.30.200.20 | 93-177 | no description | IIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGY |
| HMMPanther: PTHR24420:SF861 | 93-303 | SUBFAMILY NOT NAMED | IIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGV |
| HMMPanther: PTHR24420 | 93-303 | FAMILY NOT NAMED,FAMILY NOT NAMED | IIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGV |
| ProfileScan: PS50011 IPR000719
|
108-315 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVCSLGAFDGKKIC |
| HMMSmart: SM00220 IPR002290
|
108-314 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVCSLGAFDGKKI |
| HMMSmart: SM00219 IPR020635
|
108-314 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVCSLGAFDGKKI |
| HMMPfam: PF07714 IPR001245
|
113-305 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVCS |
| PatternScan: PS00107 IPR017441
|
114-143 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGEGGFGTVYKGYIDENVRVGLKSLPVAVK |
| Gene3D: G3DSA:1.10.510.10 | 178-306 | no description | CCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAKRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVCSL |
| PatternScan: PS00108 IPR008271
|
234-246 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VIYRDFKTSNILL |
List of Contributions
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