PRGDB00068431 (Ghi.8145)
| Ghi.8145 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 28916445 (AY212968) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Gossypium hirsutum |
DNA Sequence
GTGGTTTCTGTCAAACCTTGGGCCACGGGATTAAGTGGGCAGCTGCAGAAGGCATTTGTAACAGGTGTACCGAAGCTCAAGCGATCAGAACTTGAAGCAGCTTGTGAGGATTTCAGCAATGTAATTGGTACCTTTTCTGATGGAACAGTCTACAAGGGGACTTTATCAAGTGGGGTCGAAATAGCAGTGACATCAACTGCGATTTCGTCTCGTGAAGACTGGTCAAAGAATTTAGAGACACAATTTAGAAACAAGATAGACTCGTTGTCTAAAGTGAACCACAAGAATTTCGTGAACCTCATTGGCTATTGTGAAGAAAATACGCCTTTCACAAGAATGATGGTTTTTGAGTATGTTCCTAATGGATCACTCTATGAGCATCTACATATACAAGAAGCTGAGCACTTGGACTGGGGAATGCGCCTAAGGATAGCCATGGGAATAACGTACTGCCTTGAGCATATGCATCAGCTTACTCCCCCTATAGCCCATAGAAACTTGCAGTCTTGCTCTGTATATCTGACTGAAGACTATGCTGCAAAAATATCTGATTTCAGCTTCTTGAATAATGCTACCGCAGCCAAGGTGGGATCGGCTACCATGGAGCTCTTAGAATCTCCATCAGCAGATGCAGAGAGCAATGTTTACAGCTTCGGGGTAATATTGTTTGAAATGATAACTGGTAGGATCCCGTATTCGATAGACAATAGCTCACTTGCAGACTGGGCCTCAGACTACTTGAAAAGGGACCAACCCTTGAAAGAAATGGTGGATCCAACTCTTAAATTTTTCCAAGGAGATGATCTGGAAAAATTGTTTGAAGTGGTTAAAACTTGTGTTAATCCTGATCCAAAAGAGAGACCAACAATGAGAGAAGTTGCAGCCAAGTTAAAAGAGATTACAGCAATGGGACCTGATGGAGCAACTCCAAAACTCTCTCCCCTTTGGTGGGCTGAGCTTGAAATATTGTCTACAGAACCAAGTTAATCAGTGAAATTGAAATTTAACGCTAATAAATTTGCATTCTGTTTTCCCTGTTTCTATTGTTGGGCTCCGAAGCAGCGCAGTTCCAAGTAGATTCTGCTTCTTTAATCAAAAGCTTGGAAAGAGAAATGAATCTTTGTATATAATTCATAGAGAAAAATATTTGATGTGAGccttgatttgctgctgcttctccattctttgcttgcttttgtttcctttccttttccTCATTTGTTCATTCTGATTCTAAAGTGGATGGTATAAATTCCAGTAGAGCAACTTGGGaaaaaaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ghi.8145 | translated coding region predicted by ESTScan from UniGene Ghi.8145 | VVSVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGYCEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAAKLKEITAMGPDGATPKLSPLWWAELEILSTEPS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF458 | 3-326 | PTHR24420:SF458,SUBFAMILY NOT NAMED | SVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGYCEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAAKLKEITAMGPDGATPKLSPLWWAELEILSTE |
| HMMPanther: PTHR24420 | 3-326 | PTHR24420,FAMILY NOT NAMED | SVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGYCEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAAKLKEITAMGPDGATPKLSPLWWAELEILSTE |
| Gene3D: G3DSA:3.30.200.20 | 22-103 | G3DSA:3.30.200.20 | GVPKLKRSELEAACEDFSNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGY |
| superfamily: SSF56112 IPR011009
|
27-326 | Kinase_like Protein kinase-like domain
|
KRSELEAACEDFSNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGYCEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAAKLKEITAMGPDGATPKLSPLWWAELEILSTE |
| ProfileScan: PS50011 IPR000719
|
36-300 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
EDFSNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGYCEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAAKLKEI |
| HMMPfam: PF07714 IPR001245
|
39-297 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
SNVIGTFSDGTVYKGTLSSGVEIAVTSTAISSREDWSKNLETQFRNKIDSLSKVNHKNFVNLIGYCEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAAKL |
| Gene3D: G3DSA:1.10.510.10 | 104-295 | G3DSA:1.10.510.10 | CEENTPFTRMMVFEYVPNGSLYEHLHIQEAEHLDWGMRLRIAMGITYCLEHMHQLTPPIAHRNLQSCSVYLTEDYAAKISDFSFLNNATAAKVGSATMELLESPSADAESNVYSFGVILFEMITGRIPYSIDNSSLADWASDYLKRDQPLKEMVDPTLKFFQGDDLEKLFEVVKTCVNPDPKERPTMREVAA |
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