PRGDB00068432 (Ghi.8282)
| Ghi.8282 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 78339836 (DT560110) |
| Gene Class | RLP |
| Domain Type | Ser-Thr Kinase, LRR, Receptor-Like Kinase |
| Gene Species | Gossypium hirsutum |
DNA Sequence
TCTCCACTTGGGACTTCACCGCACCAGATCCTTGCTCCTCATTCACCGGCGTCACCTGCGGTTTCAACGACCGAGTCACCATTCTGTCGCTCGGCACTGGCCTTTCCGACTCGCCTGGCCTCGCTGGCTCCCTCTCCCCTGCTCTTTCCAACCTTACCCAGCTAACCCAACTCATCCTCTTCCCTGGTCTCGTCACCGGTCCCATCCCTCCCCAACTGGGTCAACTCACTAGTTTTCGAGTCATTTCCTTGACCAACAACCGTTTAACAGGACCCATACCACCCTCCTTTTCTACTCTCCCCTTCTTGCACACTCTGGATCTGAGTTCAAACCGGCTCACCGGGTCCATCCCGCAAGGCCTCATGAAGCTTCCATCTTTAAAAGTTATGGTGTTGAGCTGGAACGAGTTAACAGGGGAGTTACCCAGAACAGTGTCGGCGCAGTTATTACACTTGGATTTGAAGAAGAACAAGATCAGCGGACCGTTGCCAAGGTTACCGTCAACTGTCCGTTACTTGTCAGTGTCGGAGAACTGGATGTGGGGCCCACTCAAGGCCCTGGAATCGCTATCCAAGTTAGTGTACCTGGACGTTAGCATGAACCAATTCAGTGGGCCCATCCCGGCTTCACTCTTCTTAAACCCCTCCCTCACTTCACTGTTTTTGCAACGGAACAATTTATCGGGTGGCCTCCCATCATCAATCAAGATGGACCCCACCTTCCAATCCTACGGCGGCCAGGGATCCATCGTGGACTTGAGCCATAACTTCATCACGGGGGATATAACCCCCTTCTTGGCTGGGGTGGAGACTCTCTTCTTGAACAATAACCATTTCACTGGGTCTGTACCTGAGAGTACGTGAAAAGCGTGTACGACGGCACCACCAAAACTTTGTATTTGCAGCATAACTATCTATCCAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ghi.8282 | translated coding region predicted by ESTScan from UniGene Ghi.8282 | XSTWDFTAPDPCSSFTGVTCGFNDRVTILSLGTGLSDSPGLAGSLSPALSNLTQLTQLILFPGLVTGPIPPQLGQLTSFRVISLTNNRLTGPIPPSFSTLPFLHTLDLSSNRLTGSIPQGLMKLPSLKVMVLSWNELTGELPRTVSAQLLHLDLKKNKISGPLPRLPSTVRYLSVSENWMWGPLKALESLSKLVYLDVSMNQFSGPIPASLFLNPSLTSLFLQRNNLSGGLPSSIKMDPTFQSYGGQGSIVDLSHNFITGDITPFLAGVETLFLNNNHFTGSVPEST |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF511 | 2-285 | LEUCINE-RICH REPEAT FAMILY PROTEIN | STWDFTAPDPCSSFTGVTCGFNDRVTILSLGTGLSDSPGLAGSLSPALSNLTQLTQLILFPGLVTGPIPPQLGQLTSFRVISLTNNRLTGPIPPSFSTLPFLHTLDLSSNRLTGSIPQGLMKLPSLKVMVLSWNELTGELPRTVSAQLLHLDLKKNKISGPLPRLPSTVRYLSVSENWMWGPLKALESLSKLVYLDVSMNQFSGPIPASLFLNPSLTSLFLQRNNLSGGLPSSIKMDPTFQSYGGQGSIVDLSHNFITGDITPFLAGVETLFLNNNHFTGSVPE |
| HMMPanther: PTHR24420 | 2-285 | FAMILY NOT NAMED,FAMILY NOT NAMED | STWDFTAPDPCSSFTGVTCGFNDRVTILSLGTGLSDSPGLAGSLSPALSNLTQLTQLILFPGLVTGPIPPQLGQLTSFRVISLTNNRLTGPIPPSFSTLPFLHTLDLSSNRLTGSIPQGLMKLPSLKVMVLSWNELTGELPRTVSAQLLHLDLKKNKISGPLPRLPSTVRYLSVSENWMWGPLKALESLSKLVYLDVSMNQFSGPIPASLFLNPSLTSLFLQRNNLSGGLPSSIKMDPTFQSYGGQGSIVDLSHNFITGDITPFLAGVETLFLNNNHFTGSVPE |
| Gene3D: G3DSA:3.80.10.10 | 9-236 | no description | PDPCSSFTGVTCGFNDRVTILSLGTGLSDSPGLAGSLSPALSNLTQLTQLILFPGLVTGPIPPQLGQLTSFRVISLTNNRLTGPIPPSFSTLPFLHTLDLSSNRLTGSIPQGLMKLPSLKVMVLSWNELTGELPRTVSAQLLHLDLKKNKISGPLPRLPSTVRYLSVSENWMWGPLKALESLSKLVYLDVSMNQFSGPIPASLFLNPSLTSLFLQRNNLSGGLPSSIK |
| superfamily: SSF52058 | 18-284 | L domain-like,LRR | VTCGFNDRVTILSLGTGLSDSPGLAGSLSPALSNLTQLTQLILFPGLVTGPIPPQLGQLTSFRVISLTNNRLTGPIPPSFSTLPFLHTLDLSSNRLTGSIPQGLMKLPSLKVMVLSWNELTGELPRTVSAQLLHLDLKKNKISGPLPRLPSTVRYLSVSENWMWGPLKALESLSKLVYLDVSMNQFSGPIPASLFLNPSLTSLFLQRNNLSGGLPSSIKMDPTFQSYGGQGSIVDLSHNFITGDITPFLAGVETLFLNNNHFTGSVP |
| HMMPfam: PF13855 | 80-137 | LRR_8,Leucine rich repeat | RVISLTNNRLTGPIPPSFSTLPFLHTLDLSSNRLTGSIPQGLMKLPSLKVMVLSWNEL |
| HMMPfam: PF00560 IPR001611
|
192-213 | LRR_1 Leucine-rich repeat
|
KLVYLDVSMNQFSGPIPASLFL |
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